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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.37553 (259 seq.)
>W1710883033
LMVH01000001
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum [LMVH]
131857
131769
-
Ser
GCT
[ENA]
¡û
>W1711095481
LTGW01000045
Fusobacteriota
Fusobacterium sp. HMSC064B12 [LTGW]
160061
159973
-
Ser
GCT
[ENA]
¡û
>W1711107106
LTSL01000139
Fusobacteriota
Fusobacterium sp. HMSC064B11 [LTSL]
38402
38314
-
Ser
GCT
[ENA]
¡û
>W1711525239
MLQO01000001
Fusobacteriota
Fusobacterium nucleatum [MLQO]
38064
38152
+
Ser
GCT
[ENA]
¡û
>W1712084813
NHRT01000001
Fusobacteriota
Fusobacterium polymorphum subsp. polymorphum [NHRT]
1164296
1164384
+
Ser
GCT
[ENA]
¡û
>W131100371
AOUL01000299
Fusobacteriota
Fusobacterium nucleatum CC53 [AOUL]
1410
1498
+
Ser
GCT
[ENA]
¡û
>C009453
AE009951
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [AE009951]
960860
960772
-
Ser
GCT
[Ensembl]
¡û
>w017374
AARG01000011
Fusobacteriota
Fusobacterium polymorphum subsp. polymorphum ATCC 10953 [AARG]
24670
24760
+
Ser
GCT
[ENA]
¡û
>WENV180007010
FLRZ01062472
[FLRZ] metagenome; saliva
13
101
+
Ser
GCT
[ENA]
¢þ
>WENV180009798
FLSC01089944
[FLSC] metagenome; saliva
7610
7698
+
Ser
GCT
[ENA]
¢þ
>WENV180011733
FLSK01030611
[FLSK] metagenome; saliva
1530
1618
+
Ser
GCT
[ENA]
¢þ
>W141000253
ACIF01000225
Fusobacteriota
Fusobacterium periodonticum D10 [ACIF]
16111
16199
+
Ser
GCT
[ENA]
¡û
>WENV180226233
OBBP01113204
[OBBP] human oral metagenome; human oral
110
22
-
Ser
GCT
[ENA]
¢þ
>WENV180551364
OCJF01015242
[OCJF] human oral metagenome; human oral
226
314
+
Ser
GCT
[ENA]
¢þ
>WENV180551680
OCJG01012806
[OCJG] human oral metagenome; human oral
85
-1
-
Ser
GCT
[ENA]
¢þ
>WENV180696529
ODCT01009159
[ODCT] human metagenome; G_DNA_Buccal mucosa
398
310
-
Ser
GCT
[ENA]
¢þ
>WENV180705701
ODEJ01014285
[ODEJ] human metagenome; G_DNA_Tongue dorsum
183
95
-
Ser
GCT
[ENA]
¢þ
>WENV180708522
ODFJ01002511
[ODFJ] human metagenome; G_DNA_Tongue dorsum
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV180717744
ODGE01001301
[ODGE] human metagenome; G_DNA_Buccal mucosa
12
100
+
Ser
GCT
[ENA]
¢þ
>WENV180718210
ODGF01001380
[ODGF] human metagenome; G_DNA_Throat
962
874
-
Ser
GCT
[ENA]
¢þ
>WENV180720544
ODGJ01065044
[ODGJ] human metagenome; G_DNA_Tongue dorsum
554
466
-
Ser
GCT
[ENA]
¢þ
>WENV180722434
ODGM01000594
[ODGM] human metagenome; G_DNA_Palatine Tonsils
8622
8710
+
Ser
GCT
[ENA]
¢þ
>WENV180724214
ODGR01000207
[ODGR] human metagenome; G_DNA_Tongue dorsum
21310
21222
-
Ser
GCT
[ENA]
¢þ
>WENV180728186
ODGU01029455
[ODGU] human metagenome; G_DNA_Supragingival plaque
319
231
-
Ser
GCT
[ENA]
¢þ
>WENV180732664
ODGY01002270
[ODGY] human metagenome; G_DNA_Supragingival plaque
2133
2221
+
Ser
GCT
[ENA]
¢þ
>WENV180739086
ODHD01004932
[ODHD] human metagenome; G_DNA_Supragingival plaque
1152
1240
+
Ser
GCT
[ENA]
¢þ
>WENV180757683
ODHW01001181
[ODHW] human metagenome; G_DNA_Tongue dorsum
7611
7523
-
Ser
GCT
[ENA]
¢þ
>WENV180759288
ODHY01005180
[ODHY] human metagenome; G_DNA_Buccal mucosa
2304
2392
+
Ser
GCT
[ENA]
¢þ
>WENV180763582
ODIA01001879
[ODIA] human metagenome; G_DNA_Tongue dorsum
9141
9229
+
Ser
GCT
[ENA]
¢þ
>WENV180768823
ODIG01018604
[ODIG] human metagenome; G_DNA_Tongue dorsum
2044
2132
+
Ser
GCT
[ENA]
¢þ
>WENV180773176
ODII01028610
[ODII] human metagenome; G_DNA_Buccal mucosa
123
35
-
Ser
GCT
[ENA]
¢þ
>WENV180773432
ODIJ01000254
[ODIJ] human metagenome; G_DNA_Tongue dorsum
24146
24058
-
Ser
GCT
[ENA]
¢þ
>WENV180775991
ODIK01011107
[ODIK] human metagenome; G_DNA_Tongue dorsum
2044
2132
+
Ser
GCT
[ENA]
¢þ
>WENV180779274
ODIN01001668
[ODIN] human metagenome; G_DNA_Throat
7779
7867
+
Ser
GCT
[ENA]
¢þ
>WENV180782796
ODIQ01000198
[ODIQ] human metagenome; G_DNA_Tongue dorsum
19850
19938
+
Ser
GCT
[ENA]
¢þ
>WENV180787629
ODIS01010135
[ODIS] human metagenome; G_DNA_Supragingival plaque
2170
2258
+
Ser
GCT
[ENA]
¢þ
>WENV180790123
ODIT01004060
[ODIT] human metagenome; G_DNA_Tongue dorsum
2469
2557
+
Ser
GCT
[ENA]
¢þ
>WENV180792835
ODIW01002668
[ODIW] human metagenome; G_DNA_Tongue dorsum
120
32
-
Ser
GCT
[ENA]
¢þ
>WENV180796785
ODJB01013709
[ODJB] human metagenome; G_DNA_Supragingival plaque
1353
1265
-
Ser
GCT
[ENA]
¢þ
>WENV180802524
ODJE01002918
[ODJE] human metagenome; G_DNA_Tongue dorsum
6343
6431
+
Ser
GCT
[ENA]
¢þ
>WENV180806116
ODJH01002192
[ODJH] human metagenome; G_DNA_Tongue dorsum
5444
5532
+
Ser
GCT
[ENA]
¢þ
>W141078897
ATKB01000102
Fusobacteriota
Fusobacterium vincentii subsp. vincentii ChDC F8 [ATKB]
10363
10275
-
Ser
GCT
[ENA]
¡û
>WENV180807817
ODJI01011846
[ODJI] human metagenome; G_DNA_Tongue dorsum
3
91
+
Ser
GCT
[ENA]
¢þ
>W141078922
ATKC01000051
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ChDC F316 [ATKC]
77997
77909
-
Ser
GCT
[ENA]
¡û
>WENV180808173
ODJI01110687
[ODJI] human metagenome; G_DNA_Tongue dorsum
3
91
+
Ser
GCT
[ENA]
¢þ
>W141078991
ATKE01000059
Fusobacteriota
Fusobacterium hwasookii ChDC F145 [ATKE]
23250
23162
-
Ser
GCT
[ENA]
¡û
>W141079018
ATKF01000104
Fusobacteriota
Fusobacterium hwasookii ChDC F174 [ATKF]
63200
63112
-
Ser
GCT
[ENA]
¡û
>W141079045
ATKG01000093
Fusobacteriota
Fusobacterium hwasookii ChDC F300 [ATKG]
1680
1592
-
Ser
GCT
[ENA]
¡û
>W141079054
ATKH01000027
Fusobacteriota
Fusobacterium hwasookii ChDC F206 [ATKH]
23379
23291
-
Ser
GCT
[ENA]
¡û
>WENV180809399
ODJK01015485
[ODJK] human metagenome; G_DNA_Subgingival plaque
109
21
-
Ser
GCT
[ENA]
¢þ
>WENV180809454
ODJK01018658
[ODJK] human metagenome; G_DNA_Subgingival plaque
1616
1528
-
Ser
GCT
[ENA]
¢þ
>WENV180810870
ODJM01001909
[ODJM] human metagenome; G_DNA_Buccal mucosa
510
598
+
Ser
GCT
[ENA]
¢þ
>WENV180814368
ODJO01014460
[ODJO] human metagenome; G_DNA_Supragingival plaque
622
534
-
Ser
GCT
[ENA]
¢þ
>WENV180814814
ODJO01061074
[ODJO] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV180815295
ODJP01000172
[ODJP] human metagenome; G_DNA_Tongue dorsum
40778
40690
-
Ser
GCT
[ENA]
¢þ
>WENV180820231
ODJR01003098
[ODJR] human metagenome; G_DNA_Tongue dorsum
6468
6556
+
Ser
GCT
[ENA]
¢þ
>WENV180821109
ODJS01000807
[ODJS] human metagenome; G_DNA_Tongue dorsum
2287
2375
+
Ser
GCT
[ENA]
¢þ
>WENV180823060
ODJW01003499
[ODJW] human metagenome; G_DNA_Supragingival plaque
3386
3298
-
Ser
GCT
[ENA]
¢þ
>WENV180830588
ODKB01006531
[ODKB] human metagenome; G_DNA_Tongue dorsum
817
729
-
Ser
GCT
[ENA]
¢þ
>WENV180832976
ODKC01009527
[ODKC] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV180833008
ODKC01010677
[ODKC] human metagenome; G_DNA_Supragingival plaque
2833
2745
-
Ser
GCT
[ENA]
¢þ
>WENV180833496
ODKC01064123
[ODKC] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV180834642
ODKD01079244
[ODKD] human metagenome; G_DNA_Supragingival plaque
258
170
-
Ser
GCT
[ENA]
¢þ
>WENV180835341
ODKE01002233
[ODKE] human metagenome; G_DNA_Supragingival plaque
4234
4322
+
Ser
GCT
[ENA]
¢þ
>WENV180842882
ODKN01000045
[ODKN] human metagenome; G_DNA_Supragingival plaque
28603
28691
+
Ser
GCT
[ENA]
¢þ
>WENV180843026
ODKN01000267
[ODKN] human metagenome; G_DNA_Supragingival plaque
35607
35519
-
Ser
GCT
[ENA]
¢þ
>WENV180844257
ODKN01064614
[ODKN] human metagenome; G_DNA_Supragingival plaque
77
165
+
Ser
GCT
[ENA]
¢þ
>WENV180846625
ODKT01016620
[ODKT] human metagenome; G_DNA_Supragingival plaque
2362
2274
-
Ser
GCT
[ENA]
¢þ
>WENV180847302
ODKT01060792
[ODKT] human metagenome; G_DNA_Supragingival plaque
248
336
+
Ser
GCT
[ENA]
¢þ
>WENV180847477
ODKT01089651
[ODKT] human metagenome; G_DNA_Supragingival plaque
657
569
-
Ser
GCT
[ENA]
¢þ
>WENV180847605
ODKT01117391
[ODKT] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV180852519
ODKW01001628
[ODKW] human metagenome; G_DNA_Tongue dorsum
8976
9064
+
Ser
GCT
[ENA]
¢þ
>WENV180854318
ODKX01002151
[ODKX] human metagenome; G_DNA_Tongue dorsum
1625
1537
-
Ser
GCT
[ENA]
¢þ
>WENV180856735
ODKZ01059856
[ODKZ] human metagenome; G_DNA_Tongue dorsum
6
94
+
Ser
GCT
[ENA]
¢þ
>WENV180858490
ODLC01008324
[ODLC] human metagenome; G_DNA_Tongue dorsum
1078
990
-
Ser
GCT
[ENA]
¢þ
>WENV180860076
ODLD01016601
[ODLD] human metagenome; G_DNA_Supragingival plaque
337
249
-
Ser
GCT
[ENA]
¢þ
>WENV180861606
ODLE01006877
[ODLE] human metagenome; G_DNA_Tongue dorsum
1314
1226
-
Ser
GCT
[ENA]
¢þ
>WENV180863749
ODLH01001980
[ODLH] human metagenome; G_DNA_Tongue dorsum
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV180866224
ODLJ01007812
[ODLJ] human metagenome; G_DNA_Tongue dorsum
2377
2465
+
Ser
GCT
[ENA]
¢þ
>WENV180873048
ODLP01000799
[ODLP] human metagenome; G_DNA_Tongue dorsum
6777
6689
-
Ser
GCT
[ENA]
¢þ
>WENV180877902
ODLV01005229
[ODLV] human metagenome; G_DNA_Tongue dorsum
2582
2670
+
Ser
GCT
[ENA]
¢þ
>WENV180880396
ODLZ01018983
[ODLZ] human metagenome; G_DNA_Tongue dorsum
162
74
-
Ser
GCT
[ENA]
¢þ
>WENV180883239
ODMC01002781
[ODMC] human metagenome; G_DNA_Tongue dorsum
8559
8647
+
Ser
GCT
[ENA]
¢þ
>WENV180888321
ODMN01000453
[ODMN] human metagenome; G_DNA_Supragingival plaque
10177
10265
+
Ser
GCT
[ENA]
¢þ
>WENV180897079
ODNI01006255
[ODNI] human metagenome; G_DNA_Tongue dorsum
2911
2999
+
Ser
GCT
[ENA]
¢þ
>WENV180900077
ODOJ01000385
[ODOJ] human metagenome; G_DNA_Tongue dorsum
14708
14796
+
Ser
GCT
[ENA]
¢þ
>WENV180902100
ODOK01016641
[ODOK] human metagenome; G_DNA_Tongue dorsum
91
3
-
Ser
GCT
[ENA]
¢þ
>WENV180916831
ODTD01001440
[ODTD] human metagenome; G_DNA_Tongue dorsum
1071
983
-
Ser
GCT
[ENA]
¢þ
>WENV180919760
ODTH01000138
[ODTH] human metagenome; G_DNA_Tongue dorsum
30791
30703
-
Ser
GCT
[ENA]
¢þ
>WENV180922549
ODTJ01005701
[ODTJ] human metagenome; G_DNA_Supragingival plaque
4288
4376
+
Ser
GCT
[ENA]
¢þ
>WENV180924324
ODTK01003320
[ODTK] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV180924776
ODTK01015439
[ODTK] human metagenome; G_DNA_Supragingival plaque
1753
1841
+
Ser
GCT
[ENA]
¢þ
>WENV180925319
ODTK01087454
[ODTK] human metagenome; G_DNA_Supragingival plaque
138
50
-
Ser
GCT
[ENA]
¢þ
>WENV180927957
ODTM01008223
[ODTM] human metagenome; G_DNA_Supragingival plaque
324
412
+
Ser
GCT
[ENA]
¢þ
>WENV180931375
ODTP01003317
[ODTP] human metagenome; G_DNA_Tongue dorsum
112
24
-
Ser
GCT
[ENA]
¢þ
>WENV180936929
ODTV01002198
[ODTV] human metagenome; G_DNA_Buccal mucosa
264
176
-
Ser
GCT
[ENA]
¢þ
>WENV180939168
ODTX01018083
[ODTX] human metagenome; G_DNA_Supragingival plaque
1692
1780
+
Ser
GCT
[ENA]
¢þ
>WENV180940160
ODTX01285139
[ODTX] human metagenome; G_DNA_Supragingival plaque
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV180945836
ODUD01000202
[ODUD] human metagenome; G_DNA_Tongue dorsum
12
100
+
Ser
GCT
[ENA]
¢þ
>WENV180949014
ODUG01006752
[ODUG] human metagenome; G_DNA_Tongue dorsum
2960
3048
+
Ser
GCT
[ENA]
¢þ
>WENV180952073
ODUH01113128
[ODUH] human metagenome; G_DNA_Subgingival plaque
6
94
+
Ser
GCT
[ENA]
¢þ
>WENV180954825
ODUJ01010710
[ODUJ] human metagenome; G_DNA_Tongue dorsum
2373
2461
+
Ser
GCT
[ENA]
¢þ
>WENV180959644
ODUM01001836
[ODUM] human metagenome; G_DNA_Tongue dorsum
10327
10415
+
Ser
GCT
[ENA]
¢þ
>WENV180964686
ODUO01010491
[ODUO] human metagenome; G_DNA_Supragingival plaque
108
196
+
Ser
GCT
[ENA]
¢þ
>WENV180968353
ODUT01020081
[ODUT] human metagenome; G_DNA_Tongue dorsum
1368
1456
+
Ser
GCT
[ENA]
¢þ
>WENV180973554
ODUW01008024
[ODUW] human metagenome; G_DNA_Supragingival plaque
2276
2188
-
Ser
GCT
[ENA]
¢þ
>WENV180977846
ODUZ01006990
[ODUZ] human metagenome; G_DNA_Tongue dorsum
2906
2994
+
Ser
GCT
[ENA]
¢þ
>WENV180981405
ODVE01020284
[ODVE] human metagenome; G_DNA_Supragingival plaque
1373
1461
+
Ser
GCT
[ENA]
¢þ
>WENV180985800
ODVJ01017845
[ODVJ] human metagenome; G_DNA_Tongue dorsum
1607
1695
+
Ser
GCT
[ENA]
¢þ
>WENV180987247
ODVK01009689
[ODVK] human metagenome; G_DNA_Supragingival plaque
732
644
-
Ser
GCT
[ENA]
¢þ
>WENV180988487
ODVL01001863
[ODVL] human metagenome; G_DNA_Tongue dorsum
7082
7170
+
Ser
GCT
[ENA]
¢þ
>WENV180989468
ODVL01221991
[ODVL] human metagenome; G_DNA_Tongue dorsum
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV180990474
ODVN01001534
[ODVN] human metagenome; G_DNA_Tongue dorsum
8283
8371
+
Ser
GCT
[ENA]
¢þ
>WENV180999134
ODVT01007017
[ODVT] human metagenome; G_DNA_Buccal mucosa
3457
3545
+
Ser
GCT
[ENA]
¢þ
>WENV181001834
ODVW01024012
[ODVW] human metagenome; G_DNA_Buccal mucosa
60
148
+
Ser
GCT
[ENA]
¢þ
>WENV181003223
ODVX01006879
[ODVX] human metagenome; G_DNA_Supragingival plaque
299
211
-
Ser
GCT
[ENA]
¢þ
>WENV181004067
ODVX01084231
[ODVX] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV181006174
ODWA01003131
[ODWA] human metagenome; G_DNA_Buccal mucosa
388
300
-
Ser
GCT
[ENA]
¢þ
>WENV181006224
ODWA01004595
[ODWA] human metagenome; G_DNA_Buccal mucosa
2999
2911
-
Ser
GCT
[ENA]
¢þ
>WENV181008688
ODWE01010990
[ODWE] human metagenome; G_DNA_Supragingival plaque
2
90
+
Ser
GCT
[ENA]
¢þ
>WENV181008772
ODWE01013170
[ODWE] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV181009015
ODWE01023965
[ODWE] human metagenome; G_DNA_Supragingival plaque
1717
1629
-
Ser
GCT
[ENA]
¢þ
>WENV181009812
ODWE01240526
[ODWE] human metagenome; G_DNA_Supragingival plaque
2
90
+
Ser
GCT
[ENA]
¢þ
>WENV181009873
ODWE01270855
[ODWE] human metagenome; G_DNA_Supragingival plaque
108
20
-
Ser
GCT
[ENA]
¢þ
>WENV181009874
ODWE01271851
[ODWE] human metagenome; G_DNA_Supragingival plaque
3
91
+
Ser
GCT
[ENA]
¢þ
>WENV181011315
ODWI01019047
[ODWI] human metagenome; G_DNA_Tongue dorsum
153
65
-
Ser
GCT
[ENA]
¢þ
>WENV181013606
ODWN01001815
[ODWN] human metagenome; G_DNA_Tongue dorsum
1220
1132
-
Ser
GCT
[ENA]
¢þ
>WENV181016724
ODWR01005451
[ODWR] human metagenome; G_DNA_Tongue dorsum
911
823
-
Ser
GCT
[ENA]
¢þ
>WENV181020355
ODWU01136896
[ODWU] human metagenome; G_DNA_Supragingival plaque
6
94
+
Ser
GCT
[ENA]
¢þ
>WENV181020684
ODWV01000095
[ODWV] human metagenome; G_DNA_Tongue dorsum
41040
40952
-
Ser
GCT
[ENA]
¢þ
>WENV181027662
ODXD01024346
[ODXD] human metagenome; G_DNA_Buccal mucosa
510
598
+
Ser
GCT
[ENA]
¢þ
>WENV181033068
ODXN01002280
[ODXN] human metagenome; G_DNA_Tongue dorsum
136
48
-
Ser
GCT
[ENA]
¢þ
>WENV181038033
ODXQ01000244
[ODXQ] human metagenome; G_DNA_Tongue dorsum
2043
2131
+
Ser
GCT
[ENA]
¢þ
>WENV181040723
ODXS01000611
[ODXS] human metagenome; G_DNA_Tongue dorsum
19768
19856
+
Ser
GCT
[ENA]
¢þ
>WENV181042584
ODXU01001020
[ODXU] human metagenome; G_DNA_Buccal mucosa
513
425
-
Ser
GCT
[ENA]
¢þ
>WENV181043734
ODXV01000588
[ODXV] human metagenome; G_DNA_Tongue dorsum
8478
8566
+
Ser
GCT
[ENA]
¢þ
>WENV181045655
ODXW01000909
[ODXW] human metagenome; G_DNA_Tongue dorsum
15315
15403
+
Ser
GCT
[ENA]
¢þ
>WENV181050193
ODYD01008519
[ODYD] human metagenome; G_DNA_Supragingival plaque
1809
1721
-
Ser
GCT
[ENA]
¢þ
>WENV181051865
ODYE01005646
[ODYE] human metagenome; G_DNA_Tongue dorsum
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV181052609
ODYG01003925
[ODYG] human metagenome; G_DNA_Tongue dorsum
259
171
-
Ser
GCT
[ENA]
¢þ
>WENV181058059
ODYL01002982
[ODYL] human metagenome; G_DNA_Tongue dorsum
93
5
-
Ser
GCT
[ENA]
¢þ
>WENV181059704
ODYM01006337
[ODYM] human metagenome; G_DNA_Tongue dorsum
2377
2465
+
Ser
GCT
[ENA]
¢þ
>WENV181063447
ODYP01000847
[ODYP] human metagenome; G_DNA_Supragingival plaque
14299
14211
-
Ser
GCT
[ENA]
¢þ
>WENV181066669
ODZI01000821
[ODZI] human metagenome; G_DNA_Supragingival plaque
3045
2957
-
Ser
GCT
[ENA]
¢þ
>WENV181068851
ODZZ01003640
[ODZZ] human metagenome; G_DNA_Tongue dorsum
1078
990
-
Ser
GCT
[ENA]
¢þ
>WENV181070425
OEAE01001420
[OEAE] human metagenome; G_DNA_Supragingival plaque
1419
1507
+
Ser
GCT
[ENA]
¢þ
>WENV181074531
OEAO01011545
[OEAO] human metagenome; G_DNA_Tongue dorsum
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV181075992
OEAP01001102
[OEAP] human metagenome; G_DNA_Supragingival plaque
16789
16701
-
Ser
GCT
[ENA]
¢þ
>WENV181076304
OEAP01003528
[OEAP] human metagenome; G_DNA_Supragingival plaque
7887
7799
-
Ser
GCT
[ENA]
¢þ
>WENV181076794
OEAP01014078
[OEAP] human metagenome; G_DNA_Supragingival plaque
2973
2885
-
Ser
GCT
[ENA]
¢þ
>WENV181077173
OEAP01030200
[OEAP] human metagenome; G_DNA_Supragingival plaque
6
94
+
Ser
GCT
[ENA]
¢þ
>WENV181077591
OEAP01082500
[OEAP] human metagenome; G_DNA_Supragingival plaque
566
478
-
Ser
GCT
[ENA]
¢þ
>WENV181078212
OEAQ01030145
[OEAQ] human metagenome; G_DNA_Buccal mucosa
204
292
+
Ser
GCT
[ENA]
¢þ
>WENV181081050
OEAS01120193
[OEAS] human metagenome; G_DNA_Supragingival plaque
699
611
-
Ser
GCT
[ENA]
¢þ
>WENV181081998
OEAS01538131
[OEAS] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV181082005
OEAS01547569
[OEAS] human metagenome; G_DNA_Supragingival plaque
92
4
-
Ser
GCT
[ENA]
¢þ
>WENV181083565
OEAV01011470
[OEAV] human metagenome; G_DNA_Supragingival plaque
2335
2423
+
Ser
GCT
[ENA]
¢þ
>WENV181084226
OEAV01105531
[OEAV] human metagenome; G_DNA_Supragingival plaque
325
413
+
Ser
GCT
[ENA]
¢þ
>WENV181085074
OEAX01001335
[OEAX] human metagenome; G_DNA_Tongue dorsum
8953
9041
+
Ser
GCT
[ENA]
¢þ
>WENV181087032
OEAY01008996
[OEAY] human metagenome; G_DNA_Tongue dorsum
2637
2725
+
Ser
GCT
[ENA]
¢þ
>WENV181091055
OEBC01010382
[OEBC] human metagenome; G_DNA_Supragingival plaque
3002
2914
-
Ser
GCT
[ENA]
¢þ
>WENV181091251
OEBC01020110
[OEBC] human metagenome; G_DNA_Supragingival plaque
4
92
+
Ser
GCT
[ENA]
¢þ
>WENV181092008
OEBC01181296
[OEBC] human metagenome; G_DNA_Supragingival plaque
344
256
-
Ser
GCT
[ENA]
¢þ
>WENV181094889
OEBY01001662
[OEBY] human metagenome; G_DNA_Tongue dorsum
8365
8453
+
Ser
GCT
[ENA]
¢þ
>WENV181097099
OECA01002299
[OECA] human metagenome; G_DNA_Tongue dorsum
91
3
-
Ser
GCT
[ENA]
¢þ
>WENV181102415
OECT01002843
[OECT] human metagenome; G_DNA_Tongue dorsum
8363
8451
+
Ser
GCT
[ENA]
¢þ
>WENV181103556
OECV01000199
[OECV] human metagenome; G_DNA_Throat
7886
7798
-
Ser
GCT
[ENA]
¢þ
>WENV181105312
OEED01002676
[OEED] human metagenome; G_DNA_Tongue dorsum
133
45
-
Ser
GCT
[ENA]
¢þ
>WENV181107127
OEEI01002258
[OEEI] human metagenome; G_DNA_Supragingival plaque
2644
2732
+
Ser
GCT
[ENA]
¢þ
>WENV181108596
OEEJ01000090
[OEEJ] human metagenome; G_DNA_Tongue dorsum
120
32
-
Ser
GCT
[ENA]
¢þ
>WENV181112710
OEEL01002456
[OEEL] human metagenome; G_DNA_Tongue dorsum
553
465
-
Ser
GCT
[ENA]
¢þ
>WENV181115099
OEEO01021219
[OEEO] human metagenome; G_DNA_Supragingival plaque
420
332
-
Ser
GCT
[ENA]
¢þ
>WENV181121367
OEFL01002954
[OEFL] human metagenome; G_DNA_Supragingival plaque
1279
1191
-
Ser
GCT
[ENA]
¢þ
>WENV181129560
OEFX01042633
[OEFX] human metagenome; G_DNA_Tongue dorsum
221
133
-
Ser
GCT
[ENA]
¢þ
>WENV181130062
OEFY01000587
[OEFY] human metagenome; G_DNA_Throat
8392
8480
+
Ser
GCT
[ENA]
¢þ
>WENV181136342
OEGI01003715
[OEGI] human metagenome; G_DNA_Supragingival plaque
1548
1636
+
Ser
GCT
[ENA]
¢þ
>WENV181138962
OEGN01001891
[OEGN] human metagenome; G_DNA_Tongue dorsum
8514
8602
+
Ser
GCT
[ENA]
¢þ
>WENV181141068
OEGT01001036
[OEGT] human metagenome; G_DNA_Throat
8283
8371
+
Ser
GCT
[ENA]
¢þ
>WENV181143590
OEHM01002416
[OEHM] human metagenome; G_DNA_Supragingival plaque
208
120
-
Ser
GCT
[ENA]
¢þ
>WENV181146583
OEHQ01010538
[OEHQ] human metagenome; G_DNA_Supragingival plaque
2062
2150
+
Ser
GCT
[ENA]
¢þ
>WENV181150442
OEHW01002683
[OEHW] human metagenome; G_DNA_Tongue dorsum
1056
968
-
Ser
GCT
[ENA]
¢þ
>WENV181155976
OEIE01001318
[OEIE] human metagenome; G_DNA_Supragingival plaque
3864
3952
+
Ser
GCT
[ENA]
¢þ
>WENV181157369
OEIG01002859
[OEIG] human metagenome; G_DNA_Hard palate
253
165
-
Ser
GCT
[ENA]
¢þ
>WENV181158768
OEIH01009068
[OEIH] human metagenome; G_DNA_Supragingival plaque
1691
1779
+
Ser
GCT
[ENA]
¢þ
>WENV181161265
OEIK01279598
[OEIK] human metagenome; G_DNA_Supragingival plaque
108
196
+
Ser
GCT
[ENA]
¢þ
>WENV181177767
OEJS01016389
[OEJS] human metagenome; G_DNA_Supragingival plaque
108
196
+
Ser
GCT
[ENA]
¢þ
>WENV181179778
OEJT01017309
[OEJT] human metagenome; G_DNA_Supragingival plaque
1577
1489
-
Ser
GCT
[ENA]
¢þ
>WENV181180052
OEJT01059169
[OEJT] human metagenome; G_DNA_Supragingival plaque
532
444
-
Ser
GCT
[ENA]
¢þ
>WENV181502131
OGGI01005503
[OGGI] metagenome; Human gut stool
1553
1641
+
Ser
GCT
[ENA]
¢þ
>WENV181506511
OGGM01008197
[OGGM] metagenome; Human gut stool
803
891
+
Ser
GCT
[ENA]
¢þ
>WENV181548096
OGIJ01016092
[OGIJ] metagenome; Human gut stool
115
203
+
Ser
GCT
[ENA]
¢þ
>WENV181581786
OGKA01072330
[OGKA] metagenome; Human gut stool
167
255
+
Ser
GCT
[ENA]
¢þ
>W141157875
AXNU01000054
Fusobacteriota
Fusobacterium nucleatum CTI-7 [AXNU]
149980
150068
+
Ser
GCT
[ENA]
¡û
>W141157913
AXNV01000029
Fusobacteriota
Fusobacterium nucleatum CTI-6 [AXNV]
4893
4981
+
Ser
GCT
[ENA]
¡û
>W141158044
AXNY01000041
Fusobacteriota
Fusobacterium nucleatum CTI-2 [AXNY]
23860
23772
-
Ser
GCT
[ENA]
¡û
>W141221311
AZYU01000357
Fusobacteriota
Fusobacterium sp. CM21 [AZYU]
39995
39907
-
Ser
GCT
[ENA]
¡û
>WENV182432396
OIIN01003478
[OIIN] human gut metagenome; human gut
413
325
-
Ser
GCT
[ENA]
¢þ
>WENV182448602
OILK01004813
[OILK] human gut metagenome; human gut
607
519
-
Ser
GCT
[ENA]
¢þ
>WENV182461878
OINW01005438
[OINW] human gut metagenome; human gut
266
178
-
Ser
GCT
[ENA]
¢þ
>W141284879
JANA01000081
Fusobacteriota
Fusobacterium sp. OBRC1 [JANA]
49935
49847
-
Ser
GCT
[ENA]
¡û
>W141286767
JAOZ01000012
Fusobacteriota
Fusobacterium nucleatum 13_3C [JAOZ]
47440
47528
+
Ser
GCT
[ENA]
¡û
>W141288850
JAQC01000082
Fusobacteriota
Fusobacterium sp. CM22 [JAQC]
23154
23066
-
Ser
GCT
[ENA]
¡û
>WENV183001612
OLCK01003218
[OLCK] human gut metagenome; human gut
431
343
-
Ser
GCT
[ENA]
¢þ
>WENV183025127
OLFT01004686
[OLFT] human gut metagenome; faeces
8523
8611
+
Ser
GCT
[ENA]
¢þ
>WENV183510360
OMHN01009444
[OMHN] human oral metagenome; human oral
166
78
-
Ser
GCT
[ENA]
¢þ
>C181058799
CP022122
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ChDC F317 [CP022122]
1785501
1785589
+
Ser
GCT
-
¡û
>C181058849
CP022123
Fusobacteriota
Fusobacterium polymorphum KCOM 1275 [CP022123]
2459088
2459000
-
Ser
GCT
-
¡û
>C181103973
CP024698
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1283 [CP024698]
1571789
1571877
+
Ser
GCT
-
¡û
>C181104018
CP024699
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1261 [CP024699]
2013844
2013932
+
Ser
GCT
-
¡û
>C181104062
CP024700
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1263 [CP024700]
930106
930194
+
Ser
GCT
-
¡û
>C181104100
CP024701
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1277 [CP024701]
304348
304436
+
Ser
GCT
-
¡û
>C181104187
CP024702
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1282 [CP024702]
1446848
1446760
-
Ser
GCT
-
¡û
>C181104233
CP024703
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 2305 [CP024703]
716339
716251
-
Ser
GCT
-
¡û
>C181104243
CP024704
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 2555 [CP024704]
993147
993235
+
Ser
GCT
-
¡û
>C181104324
CP024705
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 2653 [CP024705]
820139
820051
-
Ser
GCT
-
¡û
>C181104868
CP024731
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1262 [CP024731]
1429791
1429703
-
Ser
GCT
-
¡û
>C181104984
CP024749
Fusobacteriota
Fusobacterium vincentii KCOM 2931 [CP024749]
932874
932962
+
Ser
GCT
-
¡û
>C181160884
CP028101
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [CP028101]
960856
960768
-
Ser
GCT
-
¡û
>C181161194
CP028108
Fusobacteriota
Fusobacterium periodonticum 2_1_31 [CP028108]
171476
171564
+
Ser
GCT
-
¡û
>C181161256
CP028109
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ATCC 23726 [CP028109]
1052446
1052358
-
Ser
GCT
-
¡û
>W09118564
ACDC01000090
Fusobacteriota
Fusobacterium periodonticum 2_1_31 [ACDC]
8417
8505
+
Ser
GCT
[ENA]
¡û
>W09126655
ACJY01000050
Fusobacteriota
Fusobacterium periodonticum ATCC 33693 [ACJY]
23763
23675
-
Ser
GCT
[ENA]
¡û
>C141001796
CP003700
Fusobacteriota
Fusobacterium vincentii 3_1_36A2 [CP003700]
1673536
1673624
+
Ser
GCT
[Ensembl]
¡û
>W1910928831
NIRJ01000001
Fusobacteriota
Fusobacterium polymorphum [NIRJ]
2353372
2353460
+
Ser
GCT
[ENA]
¡û
>W1910928868
NIRK01000001
Fusobacteriota
Fusobacterium polymorphum [NIRK]
1777227
1777139
-
Ser
GCT
[ENA]
¡û
>W1910928938
NIRL01000002
Fusobacteriota
Fusobacterium polymorphum [NIRL]
489023
488935
-
Ser
GCT
[ENA]
¡û
>W1910928941
NIRM01000001
Fusobacteriota
Fusobacterium polymorphum [NIRM]
377586
377674
+
Ser
GCT
[ENA]
¡û
>W1910929027
NIRN01000002
Fusobacteriota
Fusobacterium polymorphum [NIRN]
1077
989
-
Ser
GCT
[ENA]
¡û
>W1910929030
NIRO01000001
Fusobacteriota
Fusobacterium polymorphum [NIRO]
447104
447192
+
Ser
GCT
[ENA]
¡û
>W1910929079
NIRP01000001
Fusobacteriota
Fusobacterium polymorphum [NIRP]
795433
795521
+
Ser
GCT
[ENA]
¡û
>W1910929146
NIRQ01000001
Fusobacteriota
Fusobacterium polymorphum [NIRQ]
2481355
2481443
+
Ser
GCT
[ENA]
¡û
>W1910942314
NJGI01000010
Fusobacteriota
Fusobacterium polymorphum [NJGI]
14064
13976
-
Ser
GCT
[ENA]
¡û
>W1911431707
NXMD01000004
Fusobacteriota
Fusobacterium nucleatum 12230 MIT 2016 [NXMD]
59548
59636
+
Ser
GCT
[ENA]
¡û
>W1810076292
PEIJ01000001
Fusobacteriota
Fusobacterium vincentii subsp. vincentii KCOM 2880 [PEIJ]
469388
469476
+
Ser
GCT
[ENA]
¡û
>W1810084232
PEQW01000001
Fusobacteriota
Fusobacterium polymorphum KCOM 1265 [PEQW]
998158
998246
+
Ser
GCT
[ENA]
¡û
>W1810084318
PEQX01000003
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1321 [PEQX]
445330
445418
+
Ser
GCT
[ENA]
¡û
>W1810084366
PEQY01000001
Fusobacteriota
Fusobacterium pseudoperiodonticum KCOM 1259 [PEQY]
121027
120939
-
Ser
GCT
[ENA]
¡û
>W1810679093
QKOC01000004
Fusobacteriota
Fusobacterium nucleatum 12230 [QKOC]
46637
46725
+
Ser
GCT
[ENA]
¡û
>C151016851
CP007064
Fusobacteriota
Fusobacterium vincentii 3_1_27 [CP007064, CP007065]
590221
590133
-
Ser
GCT
[Ensembl]
¡û
>C151097785
CP012714
Fusobacteriota
Fusobacterium vincentii ChDC F8 KCOM 1231 [CP012714]
429584
429496
-
Ser
GCT
-
¡û
>C151097845
CP012716
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ChDC F316 KCOM 1322 [CP012716]
1084140
1084052
-
Ser
GCT
-
¡û
>C151097882
CP012717
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum KCOM 1250 [CP012717]
2170981
2170893
-
Ser
GCT
-
¡û
>W10102857
ACPU01000010
Fusobacteriota
Fusobacterium vincentii 3_1_36A2 [ACPU]
78015
78103
+
Ser
GCT
[ENA]
¡û
>W10113545
ADGF01000032
Fusobacteriota
Fusobacterium vincentii 3_1_27 [ADGF]
48459
48371
-
Ser
GCT
[ENA]
¡û
>W10113583
ADGG01000041
Fusobacteriota
Fusobacterium periodonticum 1_1_41FAA [ADGG]
181116
181028
-
Ser
GCT
[ENA]
¡û
>W10119097
ADVK01000001
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ATCC 23726 [ADVK]
6982
7070
+
Ser
GCT
[ENA]
¡û
>W11103013
ACPU01000010
Fusobacteriota
Fusobacterium vincentii 3_1_36A2 [ACPU]
78015
78103
+
Ser
GCT
[ENA]
¡û
>W11116834
ADGF01000032
Fusobacteriota
Fusobacterium vincentii 3_1_27 [ADGF]
48459
48371
-
Ser
GCT
[ENA]
¡û
>W11116872
ADGG01000041
Fusobacteriota
Fusobacterium periodonticum 1_1_41FAA [ADGG]
181116
181028
-
Ser
GCT
[ENA]
¡û
>W11125317
ADVK01000001
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum ATCC 23726 [ADVK]
6982
7070
+
Ser
GCT
[ENA]
¡û
>C161051449
CP013121
Fusobacteriota
Fusobacterium polymorphum ChDC F306 [CP013121]
1352571
1352659
+
Ser
GCT
-
¡û
>C161055320
CP013328
Fusobacteriota
Fusobacterium polymorphum ChDC F319 [CP013328]
553243
553155
-
Ser
GCT
-
¡û
>C161055376
CP013331
Fusobacteriota
Fusobacterium hwasookii ChDC F174 [CP013331]
2233188
2233100
-
Ser
GCT
[Ensembl]
¡û
>C161055385
CP013334
Fusobacteriota
Fusobacterium hwasookii ChDC F300 [CP013334]
227613
227701
+
Ser
GCT
[Ensembl]
¡û
>C161055466
CP013336
Fusobacteriota
Fusobacterium hwasookii ChDC F206 [CP013336]
2347865
2347777
-
Ser
GCT
-
¡û
>C161106085
LN831027
Fusobacteriota
Fusobacterium polymorphum NCTC10562 [LN831027]
796419
796331
-
Ser
GCT
-
¡û
>W121001329
ADDB01000002
Fusobacteriota
Fusobacterium polymorphum subsp. polymorphum F0401 [ADDB]
99357
99445
+
Ser
GCT
[ENA]
¡û
>W121119270
ALVD01000005
Fusobacteriota
Fusobacterium hwasookii ChDC F128 [ALVD]
94853
94941
+
Ser
GCT
[ENA]
¡û
>W1610744959
LMVH01000001
Fusobacteriota
Fusobacterium nucleatum subsp. nucleatum [LMVH]
131857
131769
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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