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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.428943 (8 seq.)
>W1910733684
MHIX01000034
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17 [MHIX]
20583
20655
+
Arg
GCG
[ENA]
¡û
>W1910733775
MHIZ01000038
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_44_20b [MHIZ]
20553
20625
+
Arg
GCG
[ENA]
¡û
>W1910733870
MHJC01000022
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_44_13 [MHJC]
10381
10453
+
Arg
GCG
[ENA]
¡û
>W1910739568
MHRX01000056
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b [MHRX]
10692
10620
-
Arg
GCG
[ENA]
¡û
>W2010867114
MHIX01000034
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17 [MHIX]
20583
20655
+
Arg
GCG
[ENA]
¡û
>W2010867205
MHIZ01000038
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_44_20b [MHIZ]
20553
20625
+
Arg
GCG
[ENA]
¡û
>W2010867300
MHJC01000022
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_44_13 [MHJC]
10381
10453
+
Arg
GCG
[ENA]
¡û
>W2010872998
MHRX01000056
Unclassified
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b [MHRX]
10692
10620
-
Arg
GCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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