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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.46251 (4 seq.)
>W1810692789
QLKV01000006
Gammaproteobacteria
Thermomonas haemolytica HAMBI_2467 [QLKV]
126306
126396
+
Ser
CGA
[ENA]
¡û
>W2010910322
MSZW01000033
Gammaproteobacteria
Thermomonas haemolytica LMG 19653 [MSZW]
25748
25838
+
Ser
CGA
[ENA]
¡û
>W2011627669
SMAP01000004
Gammaproteobacteria
Thermomonas haemolytica DSM 13605 [SMAP]
31777
31687
-
Ser
CGA
[ENA]
¡û
>W1710582981
FQUK01000025
Gammaproteobacteria
Thermomonas hydrothermalis [FQUK]
2849
2939
+
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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