tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.523752 (106 seq.)
>W1710860127 LMCQ01000008 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 108573 108648 + Ala CGC [ENA] ¡û
>W1710861745 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 722351 722276 - Ala CGC [ENA] ¡û
>W1710873719 LMNA01000001 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 555835 555760 - Ala CGC [ENA] ¡û
>W1710882316 LMTS01000069 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 39576 39651 + Ala CGC [ENA] ¡û
>W1711259822 LYVO01000037 Betaproteobacteria Variovorax sp. KK3 [LYVO] 29908 29833 - Ala CGC [ENA] ¡û
>W1711386510 MEFM01000027 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 28332 28407 + Ala CGC [ENA] ¡û
>W1711387466 MEGR01000005 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 52383 52308 - Ala CGC [ENA] ¡û
>W1711506644 MKWO01000051 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 102232 102157 - Ala CGC [ENA] ¡û
>W131174645 ARIP01000071 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 424126 424201 + Ala CGC [ENA] ¡û
>WENV180016740 FSVW01000808 [FSVW] metagenome; soil 7220 7145 - Ala CGC [ENA] ¡û
>WENV180028789 FTJH01000373 [FTJH] metagenome; soil 879 804 - Ala CGC [ENA] ¡û
>WENV180370975 OBOI01000044 [OBOI] sediment metagenome; sediment 47868 47943 + Ala CGC [ENA] ¡û
>WENV181364799 OFPD01000364 [OFPD] sediment metagenome; Lake sediment 1867 1792 - Ala CGC [ENA] ¡û
>WENV181364974 OFPG01003011 [OFPG] sediment metagenome; Lake sediment 795 720 - Ala CGC [ENA] ¡û
>WENV170012157 APMI01127834 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 76 1 - Ala CGC [ENA] ¡û
>W141425989 JEMG01000001 Betaproteobacteria Hylemonella gracilis str. Niagara R [JEMG] 3096705 3096780 + Ala CGC [ENA] ¡û
>WENV170556928 CXWL01016409 [CXWL] groundwater metagenome; biofilm material 103 28 - Ala CGC [ENA] ¡û
>WENV170559421 CXWL01122897 [CXWL] groundwater metagenome; biofilm material 1406 1331 - Ala CGC [ENA] ¡û
>WENV170559516 CXWL01127031 [CXWL] groundwater metagenome; biofilm material 1053 1128 + Ala CGC [ENA] ¡û
>WENV170634589 FZPR01000014 [FZPR] metagenome; sediment 20501 20426 - Ala CGC [ENA] ¡û
>WENV170639283 JFJP01001751 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 21827 21902 + Ala CGC [ENA] ¡û
>WENV170639558 JFJP01004533 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3109 3034 - Ala CGC [ENA] ¡û
>WENV170707567 LNAP01025632 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 835 760 - Ala CGC [ENA] ¡û
>WENV170708448 LNAP01082721 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 835 760 - Ala CGC [ENA] ¡û
>WENV170708736 LNAQ01000384 [LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1841 1766 - Ala CGC [ENA] ¡û
>WENV171003368 NNBT01007116 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 1143 1218 + Ala CGC [ENA] ¡û
>WENV171003624 NNBU01000968 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 5298 5373 + Ala CGC [ENA] ¡û
>WENV171003788 NNBV01000777 [NNBV] plant metagenome; symbiotic tissue sample KVS11 138067 137992 - Ala CGC [ENA] ¡û
>W141558071 JHVQ01000004 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 230794 230719 - Ala CGC [ENA] ¡û
>W09119918 ACEE01000006 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 154410 154335 - Ala CGC [ENA] ¡û
>C09111127 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 1651958 1651883 - Ala CGC [Ensembl] ¡û
>C141002578 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 1759898 1759823 - Ala CGC [Ensembl] ¡û
>W1911496698 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 5441457 5441532 + Ala CGC [ENA] ¡û
>W1911647324 QAJK01000013 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 29018 28943 - Ala CGC [ENA] ¡û
>W1810046177 NNBQ01000002 Betaproteobacteria Variovorax sp. B4 [NNBQ] 226037 225962 - Ala CGC [ENA] ¡û
>W1810046274 NNBR01000002 Betaproteobacteria Variovorax sp. B2 [NNBR] 226037 225962 - Ala CGC [ENA] ¡û
>W1810072235 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 5116163 5116088 - Ala CGC [ENA] ¡û
>W1810192728 PKMT01000005 Betaproteobacteria Variovorax sp. RO1 [PKMT] 243835 243910 + Ala CGC [ENA] ¡û
>SRA1003750 SRR002327.163555 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 170 95 - Ala CGC [SRA]
>W1810392033 PXZZ01000007 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 95515 95440 - Ala CGC [ENA] ¡û
>W1810486673 QAYA01000008 Betaproteobacteria Variovorax sp. GV040 [QAYA] 36879 36954 + Ala CGC [ENA] ¡û
>W1810577506 QEOH01000002 Betaproteobacteria Variovorax sp. GV014 [QEOH] 332513 332588 + Ala CGC [ENA] ¡û
>W1810672522 QJTM01000002 Betaproteobacteria Variovorax sp. GV035 [QJTM] 36879 36954 + Ala CGC [ENA] ¡û
>W1810676110 QKLT01000008 Betaproteobacteria Variovorax sp. GV042 [QKLT] 36879 36954 + Ala CGC [ENA] ¡û
>W1810682459 QKUE01000002 Betaproteobacteria Variovorax sp. GV004 [QKUE] 36879 36954 + Ala CGC [ENA] ¡û
>W2010469805 JAAGOW010000001 Betaproteobacteria Variovorax sp. WS11 [JAAGOW] 1170680 1170755 + Ala CGC [ENA] ¡û
>W2010609287 JABMJH010000002 Betaproteobacteria Variovorax sp. SG533 [JABMJH] 1407097 1407172 + Ala CGC [ENA] ¡û
>W2010727880 JACIGE010000001 Betaproteobacteria Rhodocyclus tenuis 2761 [JACIGE] 65138 65063 - Ala CGC [ENA] ¡û
>W2010782050 LMUW01000200 Betaproteobacteria Xenophilus sp. L33 [LMUW] 23155 23230 + Ala CGC [ENA] ¡û
>W2011157602 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 5441457 5441532 + Ala CGC [ENA] ¡û
>W2011235308 QAJK01000013 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 29018 28943 - Ala CGC [ENA] ¡û
>W2011407887 RCZI01000004 Betaproteobacteria Variovorax guangxiensis S06.C [RCZI] 106723 106798 + Ala CGC [ENA] ¡û
>W2011407936 RCZJ01000006 Betaproteobacteria Variovorax ginsengisoli S09.D [RCZJ] 79407 79332 - Ala CGC [ENA] ¡û
>W2011494472 RWKH01000030 Betaproteobacteria Variovorax sp. DXTD-1 [RWKH] 59112 59187 + Ala CGC [ENA] ¡û
>W2011577717 SGWS01000006 Betaproteobacteria Variovorax sp. BK460 [SGWS] 251349 251274 - Ala CGC [ENA] ¡û
>W2011624469 SLYJ01000003 Betaproteobacteria Variovorax sp. GV051 [SLYJ] 36879 36954 + Ala CGC [ENA] ¡û
>W2011625441 SLYZ01000002 Betaproteobacteria Variovorax sp. GV008 [SLYZ] 332513 332588 + Ala CGC [ENA] ¡û
>W2011692229 SSSP01000011 Betaproteobacteria Rhodocyclus tenuis Pfennig 2761 [SSSP] 149692 149767 + Ala CGC [ENA] ¡û
>W2110079445 CAIGKF010000007 Betaproteobacteria Variovorax paradoxus [CAIGKF] 25083 25158 + Ala CGC [ENA] ¡û
>W2110159662 JAATOM010000003 Betaproteobacteria Variovorax sp. dw_308 [JAATOM] 526352 526427 + Ala CGC [ENA] ¡û
>W2110161248 JAAVVD010000008 Betaproteobacteria Variovorax sp. dw_954 [JAAVVD] 77491 77416 - Ala CGC [ENA] ¡û
>W2110408644 JAEFCB010000015 Betaproteobacteria Variovorax sp. IB41 [JAEFCB] 72091 72166 + Ala CGC [ENA] ¡û
>W2110457154 JAEVYQ010000084 Betaproteobacteria Variovorax paradoxus BFB1_13 [JAEVYQ] 10432 10507 + Ala CGC [ENA] ¡û
>W2110541692 JAGGNU010000020 Betaproteobacteria Variovorax paradoxus ISL-3 [JAGGNU] 104443 104518 + Ala CGC [ENA] ¡û
>W2110541770 JAGGNW010000009 Betaproteobacteria Variovorax paradoxus ISL-81 [JAGGNW] 331965 331890 - Ala CGC [ENA] ¡û
>C201162722 CP045644 Betaproteobacteria Variovorax paradoxus 5C-2 [CP045644] 6795852 6795927 + Ala CGC - ¡û
>C201306929 LR594659 Betaproteobacteria Variovorax sp. PBL-H6 [LR594659] 4646359 4646434 + Ala CGC - ¡û
>C201307063 LR594671 Betaproteobacteria Variovorax sp. PBL-E5 [LR594671] 3968572 3968647 + Ala CGC - ¡û
>C201307105 LR594675 Betaproteobacteria Variovorax sp. PBS-H4 [LR594675] 4973838 4973913 + Ala CGC - ¡û
>C211132297 CP060295 Betaproteobacteria Variovorax sp. PAMC26660 [CP060295] 4422332 4422257 - Ala CGC - ¡û
>C211132345 CP060296 Betaproteobacteria Variovorax sp. PAMC28562 [CP060296] 2504177 2504102 - Ala CGC - ¡û
>C211157212 CP062121 Betaproteobacteria Variovorax sp. 38R [CP062121] 1633153 1633078 - Ala CGC - ¡û
>C211172934 CP063166 Betaproteobacteria Variovorax paradoxus VAI-C [CP063166] 2015581 2015506 - Ala CGC - ¡û
>W2110748889 MOWM01000048 Betaproteobacteria Variovorax sp. E3 [MOWM] 9661 9736 + Ala CGC [ENA] ¡û
>W2110753975 NRRZ01000003 Betaproteobacteria Rhodocyclus tenuis IM 230 [NRRZ] 521608 521683 + Ala CGC [ENA] ¡û
>C231415918 CP099605 Betaproteobacteria Comamonadaceae bacterium OTU4NAUVB1 [CP099605] 1100735 1100660 - Ala CGC - ¡û
>C231461186 CP102931 Betaproteobacteria Variovorax paradoxus JBCE486 [CP102931] 4895922 4895997 + Ala CGC - ¡û
>C241111957 CP046622 Betaproteobacteria Variovorax paradoxus CSUSB [CP046622] 1684782 1684707 - Ala CGC - ¡û
>C241251449 CP123990 Betaproteobacteria Variovorax paradoxus MGMM5 [CP123990] 1021656 1021581 - Ala CGC - ¡û
>C241342644 CP138513 Betaproteobacteria Variovorax paradoxus SPNA7 [CP138513] 1655129 1655054 - Ala CGC - ¡û
>C241342688 CP138515 Betaproteobacteria Variovorax paradoxus 2u118 [CP138515] 1654648 1654573 - Ala CGC - ¡û
>C241380109 LR594662 Betaproteobacteria Variovorax sp. RA8 [LR594662] 4894683 4894758 + Ala CGC - ¡û
>C241380155 LR594666 Betaproteobacteria Variovorax sp. SRS16 [LR594666] 4056243 4056318 + Ala CGC - ¡û
>C241380186 LR594689 Betaproteobacteria Variovorax sp. WDL1 [LR594689] 1588872 1588947 + Ala CGC - ¡û
>C11123616 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 1852900 1852825 - Ala CGC [Ensembl] ¡û
>W11137163 AEGR01000074 Betaproteobacteria Hylemonella gracilis ATCC 19624 [AEGR] 215 140 - Ala CGC [ENA] ¡û
>W1511508950 JXQQ01000119 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 142861 142936 + Ala CGC [ENA] ¡û
>W1511555005 JZWI01000019 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 13881 13806 - Ala CGC [ENA] ¡û
>W1610047748 BBDP01000210 Betaproteobacteria Variovorax sp. RA8 [BBDP] 3933 4008 + Ala CGC [ENA] ¡û
>W1610072183 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 1101764 1101839 + Ala CGC [ENA] ¡û
>W1610722473 LMCQ01000008 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 108573 108648 + Ala CGC [ENA] ¡û
>W1610724091 LMDW01000001 Betaproteobacteria Variovorax sp. Root411 [LMDW] 722351 722276 - Ala CGC [ENA] ¡û
>W1610736065 LMNA01000001 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 555835 555760 - Ala CGC [ENA] ¡û
>W1610744242 LMTS01000069 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 39576 39651 + Ala CGC [ENA] ¡û
>W1710044258 BBDP01000210 Betaproteobacteria Variovorax sp. RA8 [BBDP] 3933 4008 + Ala CGC [ENA] ¡û
>W1710069385 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 1101764 1101839 + Ala CGC [ENA] ¡û
>W1710516945 FNCY01000007 Betaproteobacteria Propionivibrio dicarboxylicus [FNCY] 25631 25706 + Ala CGC [ENA] ¡û
>W1710517953 FNDR01000006 Betaproteobacteria Variovorax sp. OV700 [FNDR] 149723 149798 + Ala CGC [ENA] ¡û
>W1710530011 FNOL01000001 Betaproteobacteria Variovorax sp. YR634 [FNOL] 739953 739878 - Ala CGC [ENA] ¡û
>W1710531345 FNPM01000001 Betaproteobacteria Variovorax sp. YR266 [FNPM] 113225 113300 + Ala CGC [ENA] ¡û
>W1710542692 FNZJ01000001 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 1100688 1100613 - Ala CGC [ENA] ¡û
>W1710554290 FOII01000002 Betaproteobacteria Variovorax sp. OV084 [FOII] 107264 107339 + Ala CGC [ENA] ¡û
>W1710558131 FOLP01000001 Betaproteobacteria Variovorax sp. OK212 [FOLP] 1100688 1100613 - Ala CGC [ENA] ¡û
>W1710571877 FOWG01000009 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 300967 300892 - Ala CGC [ENA] ¡û
>W1710572116 FOWL01000002 Betaproteobacteria Variovorax sp. OK605 [FOWL] 482779 482704 - Ala CGC [ENA] ¡û
>W1710573277 FOXJ01000001 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 3168727 3168802 + Ala CGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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