tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.7030 (140 seq.)
>W1710802996 LJYF01000035 Alphaproteobacteria Bradyrhizobium yuanmingense [LJYF] 99365 99457 + Ser GCT [ENA] ○
>W1710803037 LJYG01000108 Alphaproteobacteria Bradyrhizobium manausense [LJYG] 792270 792362 + Ser GCT [ENA] ○
>W1710877765 LMQJ01000064 Alphaproteobacteria Bradyrhizobium sp. Leaf396 [LMQJ] 69793 69701 - Ser GCT [ENA] ○
>W1711072977 LSIC01000041 Alphaproteobacteria Bradyrhizobium sp. CCH5-F6 [LSIC] 91655 91563 - Ser GCT [ENA] ○
>W1711124781 LUKO01000055 Alphaproteobacteria Bradyrhizobium liaoningense [LUKO] 121859 121767 - Ser GCT [ENA] ○
>W1711138873 LVEM01000001 Alphaproteobacteria Bradyrhizobium stylosanthis [LVEM] 807522 807430 - Ser GCT [ENA] ○
>W1711180116 LWIG01000014 Alphaproteobacteria Bradyrhizobium sacchari BR10280 [LWIG] 217366 217458 + Ser GCT [ENA] ○
>W1711193135 LWUI01000011 Alphaproteobacteria Bradyrhizobium elkanii [LWUI] 398281 398373 + Ser GCT [ENA] ○
>W1711206746 LXEM01000022 Alphaproteobacteria Bradyrhizobium elkanii [LXEM] 59370 59278 - Ser GCT [ENA] ○
>W131164098 ARAG01000009 Alphaproteobacteria Bradyrhizobium elkanii USDA 76 [ARAG] 1467619 1467711 + Ser GCT [ENA] ○
>W131167486 ARDH01000047 Alphaproteobacteria Bradyrhizobium sp. WSM4349 WSM4349 [ARDH] 1417 1509 + Ser GCT [ENA] ○
>W131170250 ARFJ01000022 Alphaproteobacteria Bradyrhizobium japonicum USDA 124 [ARFJ] 38922 38830 - Ser GCT [ENA] ○
>W131217324 ATWP01000010 Alphaproteobacteria Bradyrhizobium japonicum is5 [ATWP] 80857 80765 - Ser GCT [ENA] ○
>W131228699 AUGD01000010 Alphaproteobacteria Bradyrhizobium japonicum in8p8 [AUGD] 80547 80455 - Ser GCT [ENA] ○
>W1711487035 MKFI01000001 Alphaproteobacteria Bradyrhizobium mercantei SEMIA 6399 [MKFI] 285837 285929 + Ser GCT [ENA] ○
>W1711613024 MOXO01000198 Alphaproteobacteria Bradyrhizobium elkanii [MOXO] 15047 14955 - Ser GCT [ENA] ○
>W1711928306 NAEX01000180 Alphaproteobacteria Bradyrhizobium canariense [NAEX] 283684 283592 - Ser GCT [ENA] ○
>W1711928322 NAEY01000120 Alphaproteobacteria Bradyrhizobium canariense [NAEY] 15731 15639 - Ser GCT [ENA] ○
>W1711928402 NAEZ01000181 Alphaproteobacteria Bradyrhizobium canariense [NAEZ] 229206 229298 + Ser GCT [ENA] ○
>W1711928434 NAFA01000196 Alphaproteobacteria Bradyrhizobium canariense [NAFA] 19600 19692 + Ser GCT [ENA] ○
>W1711928463 NAFB01000121 Alphaproteobacteria Bradyrhizobium canariense [NAFB] 15680 15588 - Ser GCT [ENA] ○
>W1711928537 NAFC01000172 Alphaproteobacteria Bradyrhizobium canariense [NAFC] 261303 261211 - Ser GCT [ENA] ○
>W1711928552 NAFD01000155 Alphaproteobacteria Bradyrhizobium canariense [NAFD] 42331 42239 - Ser GCT [ENA] ○
>W1711928600 NAFE01000187 Alphaproteobacteria Bradyrhizobium canariense [NAFE] 42331 42239 - Ser GCT [ENA] ○
>W1711928645 NAFF01000047 Alphaproteobacteria Bradyrhizobium canariense [NAFF] 14492 14400 - Ser GCT [ENA] ○
>W1711928697 NAFG01000142 Alphaproteobacteria Bradyrhizobium canariense [NAFG] 42331 42239 - Ser GCT [ENA] ○
>W1711928744 NAFH01000126 Alphaproteobacteria Bradyrhizobium canariense [NAFH] 14439 14347 - Ser GCT [ENA] ○
>W1711928793 NAFI01000146 Alphaproteobacteria Bradyrhizobium canariense [NAFI] 42331 42239 - Ser GCT [ENA] ○
>W1711928847 NAFJ01000129 Alphaproteobacteria Bradyrhizobium canariense [NAFJ] 464 372 - Ser GCT [ENA] ○
>W1711928889 NAFK01000145 Alphaproteobacteria Bradyrhizobium canariense [NAFK] 74017 74109 + Ser GCT [ENA] ○
>W1712049618 NFUH01000266 Alphaproteobacteria Bradyrhizobium guangdongense [NFUH] 6483 6391 - Ser GCT [ENA] ○
>C171021121 CP013127 Alphaproteobacteria Bradyrhizobium diazoefficiens USDA 122 [CP013127] 4519478 4519386 - Ser GCT - ○
>C171131941 LT859959 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [LT859959] 4187001 4187093 + Ser GCT - ○
>C003058 BA000040 Alphaproteobacteria Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040] 5640958 5641050 + Ser GCT [Ensembl] ○
>W141001297 ADOU01000070 Alphaproteobacteria Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU] 440425 440517 + Ser GCT [ENA] ○
>W141041849 AMCQ01000778 Alphaproteobacteria Bradyrhizobium sp. CCGE-LA001 [AMCQ] 362 454 + Ser GCT [ENA] ○
>W141043062 AMFB01000029 Alphaproteobacteria Bradyrhizobium sp. DFCI-1 [AMFB] 87976 87884 - Ser GCT [ENA] ○
>W141063668 APJD01000020 Alphaproteobacteria Bradyrhizobium sp. OHSU_III [APJD] 2872 2780 - Ser GCT [ENA] ○
>WENV181379300 OFRD01000358 [OFRD] wastewater metagenome; Exp Tend CN 100WW 3716 3808 + Ser GCT [ENA] ◯
>WENV181384665 OFRI01004521 [OFRI] wastewater metagenome; Exp Tend VB 90WW 323 231 - Ser GCT [ENA] ◯
>WENV181385989 OFRL01000288 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 7248 7156 - Ser GCT [ENA] ◯
>WENV181399852 OFSF01000074 [OFSF] wastewater metagenome; Exp Tend VB 100WW 22673 22581 - Ser GCT [ENA] ◯
>W141150118 AXAD01000003 Alphaproteobacteria Bradyrhizobium arachidis USDA 3384 [AXAD] 528528 528620 + Ser GCT [ENA] ○
>W141150246 AXAF01000030 Alphaproteobacteria Bradyrhizobium ottawaense USDA 4 [AXAF] 975 1067 + Ser GCT [ENA] ○
>W141150323 AXAH01000008 Alphaproteobacteria Bradyrhizobium elkanii USDA 3254 [AXAH] 22201 22109 - Ser GCT [ENA] ○
>W141151048 AXAT01000098 Alphaproteobacteria Bradyrhizobium japonicum USDA 135 [AXAT] 23939 24031 + Ser GCT [ENA] ○
>W141151191 AXAW01000007 Alphaproteobacteria Bradyrhizobium elkanii USDA 3259 [AXAW] 22199 22107 - Ser GCT [ENA] ○
>W141151226 AXAX01000002 Alphaproteobacteria Bradyrhizobium diazoefficiens USDA 122 [AXAX] 372933 372841 - Ser GCT [ENA] ○
>W141151269 AXAY01000003 Alphaproteobacteria Bradyrhizobium sp. WSM3983 [AXAY] 353283 353375 + Ser GCT [ENA] ○
>W141151328 AXAZ01000019 Alphaproteobacteria Bradyrhizobium sp. WSM1743 [AXAZ] 82238 82146 - Ser GCT [ENA] ○
>W141151476 AXBC01000003 Alphaproteobacteria Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC] 1304055 1303963 - Ser GCT [ENA] ○
>W141168835 AXVG01000011 Alphaproteobacteria Bradyrhizobium japonicum 22 [AXVG] 987491 987399 - Ser GCT [ENA] ○
>W141220427 AZXU01000003 Alphaproteobacteria Bradyrhizobium sp. WSM1417 [AZXU] 213540 213632 + Ser GCT [ENA] ○
>W141233897 BAWE01000005 Alphaproteobacteria Bradyrhizobium sp. DOA9 [BAWE] 157865 157957 + Ser GCT [ENA] ○
>W141275957 JADK01000008 Alphaproteobacteria Bradyrhizobium sp. URHA0013 [JADK] 12349 12441 + Ser GCT [ENA] ○
>WENV170000907 AFSR01007514 [AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs 1203 1111 - Ser GCT [ENA] ◯
>WENV170707416 LNAP01020032 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 4241 4149 - Ser GCT [ENA] ◯
>C181113186 CP025113 Alphaproteobacteria Bradyrhizobium sp. SK17 [CP025113] 5815189 5815281 + Ser GCT - ○
>C181178165 CP029425 Alphaproteobacteria Bradyrhizobium ottawaense OO99 [CP029425] 5967995 5967903 - Ser GCT - ○
>C181178192 CP029426 Alphaproteobacteria Bradyrhizobium amphicarpaeae 39S1MB [CP029426] 3814828 3814920 + Ser GCT - ○
>C181178236 CP029427 Alphaproteobacteria Bradyrhizobium symbiodeficiens 85S1MB [CP029427] 3639977 3640069 + Ser GCT - ○
>C181181562 CP029603 Alphaproteobacteria Bradyrhizobium diazoefficiens XF7 [CP029603] 5859832 5859924 + Ser GCT - ○
>C181203875 LS398110 Alphaproteobacteria Bradyrhizobium vignae [LS398110] 3667616 3667524 - Ser GCT - ○
>C191019689 CP022219 Alphaproteobacteria Bradyrhizobium guangxiense CCBAU 53363 [CP022219] 3739457 3739549 + Ser GCT - ○
>C191071673 CP030051 Alphaproteobacteria Bradyrhizobium guangdongense CCBAU 51649 [CP030051] 4519991 4520083 + Ser GCT - ○
>C191071741 CP030053 Alphaproteobacteria Bradyrhizobium guangzhouense CCBAU 51670 [CP030053] 3229454 3229362 - Ser GCT - ○
>C191092028 CP032617 Alphaproteobacteria Bradyrhizobium diazoefficiens 110spc4 [CP032617] 5576602 5576694 + Ser GCT - ○
>C191186631 CP041090 Alphaproteobacteria Bradyrhizobium symbiodeficiens 65S1MB [CP041090] 2899400 2899492 + Ser GCT - ○
>W1910183121 BJNL01000015 Alphaproteobacteria Bradyrhizobium elkanii NBRC 14791 [BJNL] 47627 47719 + Ser GCT [ENA] ○
>W1910598266 LAXE01000001 Alphaproteobacteria Bradyrhizobium sp. SUTN9-2 [LAXE] 4032741 4032649 - Ser GCT [ENA] ○
>W1910598961 LBJC01000033 Alphaproteobacteria Bradyrhizobium nanningense CCBAU 53390 [LBJC] 120075 119983 - Ser GCT [ENA] ○
>W1910599051 LBJQ01000086 Alphaproteobacteria Bradyrhizobium nanningense CCBAU 51757 [LBJQ] 120053 119961 - Ser GCT [ENA] ○
>W1910611582 LFJC01000003 Alphaproteobacteria Bradyrhizobium nitroreducens TSA1 [LFJC] 213114 213022 - Ser GCT [ENA] ○
>W1910693471 MDEP01000044 Alphaproteobacteria Bradyrhizobium sp. UASWS1016 [MDEP] 345848 345756 - Ser GCT [ENA] ○
>W1910840273 MZXW01000022 Alphaproteobacteria Bradyrhizobium betae Opo-243 [MZXW] 186738 186830 + Ser GCT [ENA] ○
>W1911245287 NSJY01000016 Alphaproteobacteria Bradyrhizobium sp. UFLA03-84 [NSJY] 143069 143161 + Ser GCT [ENA] ○
>W1911409781 NWTE01000008 Alphaproteobacteria Bradyrhizobium diazoefficiens Y21 [NWTE] 221819 221911 + Ser GCT [ENA] ○
>W1911409849 NWTF01000017 Alphaproteobacteria Bradyrhizobium ottawaense L2 [NWTF] 122500 122592 + Ser GCT [ENA] ○
>W1911409908 NWTG01000008 Alphaproteobacteria Bradyrhizobium sp. C9 [NWTG] 71834 71742 - Ser GCT [ENA] ○
>W1911410021 NWTI01000021 Alphaproteobacteria Bradyrhizobium sp. Y36 [NWTI] 39491 39399 - Ser GCT [ENA] ○
>W1911817872 QZMV01000006 Alphaproteobacteria Bradyrhizobium sp. LVM 105 [QZMV] 256610 256702 + Ser GCT [ENA] ○
>W1810104420 PGVG01000010 Alphaproteobacteria Bradyrhizobium forestalis INPA54B [PGVG] 26013 25921 - Ser GCT [ENA] ○
>W1810289871 PTFE01000049 Alphaproteobacteria Bradyrhizobium sp. AC87j1 [PTFE] 38816 38724 - Ser GCT [ENA] ○
>W1810367842 PVYZ01000001 Alphaproteobacteria Rhizobium tropici NFR14 [PVYZ] 526906 526998 + Ser GCT [ENA] ○
>W1810400106 PYFV01000009 Alphaproteobacteria Bradyrhizobium sp. MOS004 [PYFV] 119423 119515 + Ser GCT [ENA] ○
>W1810400168 PYFW01000010 Alphaproteobacteria Bradyrhizobium sp. MOS003 [PYFW] 90715 90623 - Ser GCT [ENA] ○
>W1810400206 PYFX01000006 Alphaproteobacteria Bradyrhizobium sp. MOS002 [PYFX] 72818 72910 + Ser GCT [ENA] ○
>SRA1014268 SRR023845.66785 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 165 257 + Ser GCT [SRA]
>WENV11101250 AFSR01007514 [AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs 1203 1111 - Ser GCT [ENA] ○
>W1511508009 JXOF01000187 Alphaproteobacteria Bradyrhizobium elkanii UASWS1015 [JXOF] 334052 334144 + Ser GCT [ENA] ○
>W1511533275 JYMR01000034 Alphaproteobacteria Bradyrhizobium sp. LTSP849 [JYMR] 87437 87529 + Ser GCT [ENA] ○
>W1511533331 JYMS01000049 Alphaproteobacteria Bradyrhizobium sp. LTSP857 [JYMS] 79428 79520 + Ser GCT [ENA] ○
>W1511681408 LFIP01000027 Alphaproteobacteria Bradyrhizobium embrapense SEMIA 6208 [LFIP] 91473 91565 + Ser GCT [ENA] ○
>W1511681485 LFIQ01000092 Alphaproteobacteria Bradyrhizobium pachyrhizi PAC 48 [LFIQ] 189489 189397 - Ser GCT [ENA] ○
>W1511684031 LFLZ01000026 Alphaproteobacteria Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ] 96524 96616 + Ser GCT [ENA] ○
>W1511705994 LGTB01000011 Alphaproteobacteria Bradyrhizobium viridifuturi SEMIA 690 [LGTB] 125630 125722 + Ser GCT [ENA] ○
>W1511706703 LGUJ01000011 Alphaproteobacteria Bradyrhizobium diazoefficiens Is-1 [LGUJ] 451612 451520 - Ser GCT [ENA] ○
>C121000748 AP012279 Alphaproteobacteria Bradyrhizobium cosmicum S23321 [AP012279] 3218736 3218644 - Ser GCT [Ensembl] ○
>C161001036 AP014685 Alphaproteobacteria Bradyrhizobium diazoefficiens NK6 [AP014685] 9580215 9580307 + Ser GCT - ○
>C161034230 CP011360 Alphaproteobacteria Bradyrhizobium diazoefficiens USDA 110 [CP011360] 4960625 4960717 + Ser GCT - ○
>C161062532 CP013949 Alphaproteobacteria Bradyrhizobium sp. CCGE-LA001 [CP013949] 4657829 4657921 + Ser GCT [Ensembl] ○
>C161107855 LN901633 Alphaproteobacteria Bradyrhizobium sp. [LN901633] 6627480 6627388 - Ser GCT - ○
>W121036201 AHLW01000001 Alphaproteobacteria Bradyrhizobium sp. WSM471 [AHLW] 4896990 4897082 + Ser GCT [ENA] ○
>W121036455 AHMB01000069 Alphaproteobacteria Bradyrhizobium sp. WSM1253 [AHMB] 39556 39464 - Ser GCT [ENA] ○
>W121062456 AJJK01001215 Alphaproteobacteria Bradyrhizobium elkanii 587 [AJJK] 2582 2490 - Ser GCT [ENA] ○
>W121065263 AJPW01000461 Alphaproteobacteria Bradyrhizobium elkanii CCBAU 43297 [AJPW] 672 764 + Ser GCT [ENA] ○
>W121065516 AJQC01000030 Alphaproteobacteria Bradyrhizobium liaoningense CCBAU 05525 [AJQC] 6365 6457 + Ser GCT [ENA] ○
>W121065584 AJQD01000392 Alphaproteobacteria Bradyrhizobium liaoningense CCBAU 83689 [AJQD] 129 37 - Ser GCT [ENA] ○
>W121065635 AJQE01000243 Alphaproteobacteria Bradyrhizobium sp. CCBAU 43298 [AJQE] 5043 4951 - Ser GCT [ENA] ○
>W121065686 AJQF01000385 Alphaproteobacteria Bradyrhizobium sp. CCBAU 15544 [AJQF] 675 767 + Ser GCT [ENA] ○
>W121065740 AJQG01000292 Alphaproteobacteria Bradyrhizobium sp. CCBAU 15615 [AJQG] 6493 6585 + Ser GCT [ENA] ○
>W121065778 AJQH01000221 Alphaproteobacteria Bradyrhizobium sp. CCBAU 15635 [AJQH] 8603 8511 - Ser GCT [ENA] ○
>W121065822 AJQI01000220 Alphaproteobacteria Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI] 27448 27540 + Ser GCT [ENA] ○
>W121065861 AJQJ01000181 Alphaproteobacteria Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ] 6350 6442 + Ser GCT [ENA] ○
>W121065913 AJQK01000167 Alphaproteobacteria Bradyrhizobium yuanmingense CCBAU 25021 [AJQK] 17644 17736 + Ser GCT [ENA] ○
>W121065980 AJQL01000403 Alphaproteobacteria Bradyrhizobium yuanmingense CCBAU 35157 [AJQL] 17636 17728 + Ser GCT [ENA] ○
>W121085064 AKIY01000088 Alphaproteobacteria Bradyrhizobium sp. YR681 [AKIY] 6338 6430 + Ser GCT [ENA] ○
>W121127076 CAFH01000066 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [CAFH] 1467 1559 + Ser GCT [ENA] ○
>W1610049412 BBEX01000939 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 958 1050 + Ser GCT [ENA] ○
>W1610514428 FMAE01000005 Alphaproteobacteria Bradyrhizobium yuanmingense [FMAE] 682695 682787 + Ser GCT [ENA] ○
>W1610514638 FMAI01000050 Alphaproteobacteria Bradyrhizobium shewense err11 [FMAI] 25959 26051 + Ser GCT [ENA] ○
>W1610549137 JXDL01000001 Alphaproteobacteria Bradyrhizobium sp. AT1 [JXDL] 1256874 1256966 + Ser GCT [ENA] ○
>W1610550323 JXJM01000001 Alphaproteobacteria Bradyrhizobium sp. DOA1 [JXJM] 2623718 2623626 - Ser GCT [ENA] ○
>W1610666853 LJYF01000035 Alphaproteobacteria Bradyrhizobium yuanmingense [LJYF] 99365 99457 + Ser GCT [ENA] ○
>W1610666894 LJYG01000108 Alphaproteobacteria Bradyrhizobium manausense [LJYG] 792270 792362 + Ser GCT [ENA] ○
>W1610740111 LMQJ01000064 Alphaproteobacteria Bradyrhizobium sp. Leaf396 [LMQJ] 69793 69701 - Ser GCT [ENA] ○
>W1610912237 LSIC01000041 Alphaproteobacteria Bradyrhizobium sp. CCH5-F6 [LSIC] 91655 91563 - Ser GCT [ENA] ○
>W1610935753 LUKO01000055 Alphaproteobacteria Bradyrhizobium liaoningense [LUKO] 121859 121767 - Ser GCT [ENA] ○
>W1610949881 LVEM01000001 Alphaproteobacteria Bradyrhizobium stylosanthis [LVEM] 807522 807430 - Ser GCT [ENA] ○
>W1710045811 BBEX01000939 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 958 1050 + Ser GCT [ENA] ○
>W1710500118 FMAE01000005 Alphaproteobacteria Bradyrhizobium yuanmingense [FMAE] 682695 682787 + Ser GCT [ENA] ○
>W1710500328 FMAI01000050 Alphaproteobacteria Bradyrhizobium shewense err11 [FMAI] 25959 26051 + Ser GCT [ENA] ○
>W1710546020 FOBX01000010 Alphaproteobacteria Bradyrhizobium sp. OK095 [FOBX] 108047 108139 + Ser GCT [ENA] ○
>W1710564445 FOQM01000031 Alphaproteobacteria Bradyrhizobium sp. Gha [FOQM] 952 1044 + Ser GCT [ENA] ○
>W1710569804 FOUS01000007 Alphaproteobacteria Bradyrhizobium sp. Rc3b [FOUS] 366040 366132 + Ser GCT [ENA] ○
>W1710571291 FOVU01000002 Alphaproteobacteria Bradyrhizobium sp. Ghvi [FOVU] 497370 497462 + Ser GCT [ENA] ○
>W1710578536 FPBQ01000035 Alphaproteobacteria Bradyrhizobium arachidis [FPBQ] 28845 28937 + Ser GCT [ENA] ○
>W1710652711 JXDL01000001 Alphaproteobacteria Bradyrhizobium sp. AT1 [JXDL] 1256874 1256966 + Ser GCT [ENA] ○
>W1710659049 JXJM01000001 Alphaproteobacteria Bradyrhizobium sp. DOA1 [JXJM] 2623718 2623626 - Ser GCT [ENA] ○
>W1710735592 LGHK01000100 Alphaproteobacteria Bradyrhizobium sp. NAS96.2 [LGHK] 88568 88660 + Ser GCT [ENA] ○
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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