tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001803)

Anticodon = GGT

HIT: 36 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.268407 (1 seq.)
>SRA1017505 SRR035082.151136 454 Sequencing (SRP001803) 246 320 + Thr GGT [SRA]
Identical group No.271848 (10 seq.)
>WENV170621134 FUWD013050026 [FUWD] metagenome; unknown 155 231 + Thr GGT [ENA] ¢þ
>WENV170629303 FUWD013266719 [FUWD] metagenome; unknown 155 231 + Thr GGT [ENA] ¢þ
>WENV170677101 LDZT01002448 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1384 1460 + Thr GGT [ENA] ¢þ
>WENV170678014 LDZT01010412 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1415 1339 - Thr GGT [ENA] ¢þ
>SRA1017819 SRR035082.202293 454 Sequencing (SRP001803) 283 359 + Thr GGT [SRA]
>SRA1030147 SRR035087.233683 454 Sequencing (SRP001808) 346 270 - Thr GGT [SRA]
>SRA1042043 SRR035091.331815 454 Sequencing (SRP001812) 522 446 - Thr GGT [SRA]
>SRA1050636 SRR035095.310644 454 Sequencing (SRP001816) 165 241 + Thr GGT [SRA]
>W1610613999 LGGO01000180 Unclassified candidate division WS6 bacterium 34_10 [LGGO] 1415 1339 - Thr GGT [ENA] ¡û
>W1710735082 LGGO01000180 Unclassified candidate division WS6 bacterium 34_10 [LGGO] 1415 1339 - Thr GGT [ENA] ¡û
Identical group No.272875 (3 seq.)
>WENV170612332 FUWD012578550 [FUWD] metagenome; unknown 260 186 - Thr GGT [ENA] ¢þ
>SRA1019286 SRR035082.429180 454 Sequencing (SRP001803) 19 93 + Thr GGT [SRA]
>SRA1036322 SRR035089.494192 454 Sequencing (SRP001810) 259 185 - Thr GGT [SRA]
Identical group No.357786 (4 seq.)
>WENV170605021 FUWD010441653 [FUWD] metagenome; unknown 232 305 + Thr GGT [ENA] ¢þ
>SRA1017443 SRR035082.139595 454 Sequencing (SRP001803) 230 303 + Thr GGT [SRA]
>SRA1019740 SRR035082.516324 454 Sequencing (SRP001803) 265 338 + Thr GGT [SRA]
>SRA1043748 SRR035092.170226 454 Sequencing (SRP001813) 50 123 + Thr GGT [SRA]
Identical group No.439668 (2 seq.)
>SRA1017031 SRR035082.70106 454 Sequencing (SRP001803) 197 270 + Thr GGT [SRA]
>SRA1017631 SRR035082.171486 454 Sequencing (SRP001803) 243 170 - Thr GGT [SRA]
Identical group No.439695 (1 seq.)
>SRA1017320 SRR035082.119081 454 Sequencing (SRP001803) 332 405 + Thr GGT [SRA]
Identical group No.439854 (1 seq.)
>SRA1019016 SRR035082.386863 454 Sequencing (SRP001803) 278 351 + Thr GGT [SRA]
Identical group No.439931 (1 seq.)
>SRA1019783 SRR035082.530686 454 Sequencing (SRP001803) 151 227 + Thr GGT [SRA]
Identical group No.453239 (6 seq.)
>WENV170622253 FUWD013094317 [FUWD] metagenome; unknown 96 169 + Thr GGT [ENA] ¢þ
>WENV170630474 FUWD013309054 [FUWD] metagenome; unknown 96 169 + Thr GGT [ENA] ¢þ
>SRA1019195 SRR035082.416889 454 Sequencing (SRP001803) 350 275 - Thr GGT [SRA]
>SRA1025593 SRR035085.44480 454 Sequencing (SRP001806) 109 182 + Thr GGT [SRA]
>SRA1040896 SRR035091.165183 454 Sequencing (SRP001812) 50 123 + Thr GGT [SRA]
>SRA1041294 SRR035091.224436 454 Sequencing (SRP001812) 49 122 + Thr GGT [SRA]
Identical group No.453317 (9 seq.)
>WENV170600332 FUWD010120595 [FUWD] metagenome; unknown 406 481 + Thr GGT [ENA] ¢þ
>WENV170626228 FUWD013217083 [FUWD] metagenome; unknown 911 986 + Thr GGT [ENA] ¢þ
>SRA1017854 SRR035082.206952 454 Sequencing (SRP001803) 194 269 + Thr GGT [SRA]
>SRA1025982 SRR035085.120747 454 Sequencing (SRP001806) 144 69 - Thr GGT [SRA]
>SRA1026155 SRR035085.154668 454 Sequencing (SRP001806) 310 385 + Thr GGT [SRA]
>SRA1031574 SRR035087.452130 454 Sequencing (SRP001808) 197 122 - Thr GGT [SRA]
>SRA1036596 SRR035089.558406 454 Sequencing (SRP001810) 191 116 - Thr GGT [SRA]
>SRA1044085 SRR035092.222005 454 Sequencing (SRP001813) 292 217 - Thr GGT [SRA]
>SRA1049157 SRR035095.30023 454 Sequencing (SRP001816) 236 311 + Thr GGT [SRA]
Identical group No.484739 (7 seq.)
>WENV170620107 FUWD013025998 [FUWD] metagenome; unknown 478 403 - Thr GGT [ENA] ¢þ
>WENV170627264 FUWD013232453 [FUWD] metagenome; unknown 12295 12220 - Thr GGT [ENA] ¢þ
>WENV170628238 FUWD013243868 [FUWD] metagenome; unknown 478 403 - Thr GGT [ENA] ¢þ
>SRA1017322 SRR035082.119203 454 Sequencing (SRP001803) 17 92 + Thr GGT [SRA]
>SRA1044787 SRR035092.344144 454 Sequencing (SRP001813) 35 110 + Thr GGT [SRA]
>SRA1047167 SRR035093.474226 454 Sequencing (SRP001814) 147 72 - Thr GGT [SRA]
>SRA1050631 SRR035095.309878 454 Sequencing (SRP001816) 95 20 - Thr GGT [SRA]
Identical group No.548269 (2 seq.)
>WENV170611491 FUWD012330915 [FUWD] metagenome; unknown 243 168 - Thr GGT [ENA] ¢þ
>SRA1016970 SRR035082.62025 454 Sequencing (SRP001803) 420 345 - Thr GGT [SRA]
Identical group No.548300 (3 seq.)
>WENV170611690 FUWD012375878 [FUWD] metagenome; unknown 374 449 + Thr GGT [ENA] ¢þ
>SRA1019615 SRR035082.489909 454 Sequencing (SRP001803) 377 452 + Thr GGT [SRA]
>SRA1041064 SRR035091.190765 454 Sequencing (SRP001812) 263 338 + Thr GGT [SRA]
Identical group No.548777 (3 seq.)
>WENV170622239 FUWD013093762 [FUWD] metagenome; unknown 977 902 - Thr GGT [ENA] ¢þ
>WENV170630451 FUWD013308610 [FUWD] metagenome; unknown 977 902 - Thr GGT [ENA] ¢þ
>SRA1017577 SRR035082.163037 454 Sequencing (SRP001803) 20 95 + Thr GGT [SRA]
Identical group No.551001 (3 seq.)
>SRA1018832 SRR035082.354470 454 Sequencing (SRP001803) 112 187 + Thr GGT [SRA]
>W1610586449 LDIV01000001 Unclassified candidate division TM6 bacterium UASB124 [LDIV] 442367 442292 - Thr GGT [ENA] ¡û
>W1710705579 LDIV01000001 Unclassified candidate division TM6 bacterium UASB124 [LDIV] 442367 442292 - Thr GGT [ENA] ¡û
Identical group No.640008 (1 seq.)
>SRA1017457 SRR035082.142519 454 Sequencing (SRP001803) 403 328 - Thr GGT [SRA]
Identical group No.640012 (1 seq.)
>SRA1017502 SRR035082.151078 454 Sequencing (SRP001803) 313 238 - Thr GGT [SRA]
Identical group No.640019 (1 seq.)
>SRA1017552 SRR035082.160817 454 Sequencing (SRP001803) 357 432 + Thr GGT [SRA]
Identical group No.640081 (1 seq.)
>SRA1018130 SRR035082.244319 454 Sequencing (SRP001803) 91 166 + Thr GGT [SRA]
Identical group No.640135 (1 seq.)
>SRA1018709 SRR035082.335846 454 Sequencing (SRP001803) 174 99 - Thr GGT [SRA]
Identical group No.640145 (1 seq.)
>SRA1018797 SRR035082.348406 454 Sequencing (SRP001803) 345 420 + Thr GGT [SRA]
Identical group No.640147 (1 seq.)
>SRA1018806 SRR035082.350426 454 Sequencing (SRP001803) 310 382 + Thr GGT [SRA]
Identical group No.640161 (1 seq.)
>SRA1019037 SRR035082.389942 454 Sequencing (SRP001803) 446 518 + Thr GGT [SRA]
Identical group No.640191 (1 seq.)
>SRA1019343 SRR035082.437678 454 Sequencing (SRP001803) 199 126 - Thr GGT [SRA]
Identical group No.640203 (1 seq.)
>SRA1019505 SRR035082.467825 454 Sequencing (SRP001803) 118 43 - Thr GGT [SRA]
Identical group No.654242 (7 seq.)
>WENV170618286 FUWD012960919 [FUWD] metagenome; unknown 128 54 - Thr GGT [ENA] ¢þ
>WENV170626712 FUWD013229048 [FUWD] metagenome; unknown 233 159 - Thr GGT [ENA] ¢þ
>SRA1017209 SRR035082.99364 454 Sequencing (SRP001803) 128 54 - Thr GGT [SRA]
>SRA1025543 SRR035085.36099 454 Sequencing (SRP001806) 315 389 + Thr GGT [SRA]
>SRA1025811 SRR035085.87651 454 Sequencing (SRP001806) 313 387 + Thr GGT [SRA]
>SRA1028958 SRR035087.46425 454 Sequencing (SRP001808) 211 137 - Thr GGT [SRA]
>SRA1049323 SRR035095.56686 454 Sequencing (SRP001816) 168 94 - Thr GGT [SRA]
Identical group No.654283 (9 seq.)
>WENV170605001 FUWD010440867 [FUWD] metagenome; unknown 314 242 - Thr GGT [ENA] ¢þ
>WENV170623311 FUWD013145538 [FUWD] metagenome; unknown 205 133 - Thr GGT [ENA] ¢þ
>WENV170631574 FUWD013357501 [FUWD] metagenome; unknown 205 133 - Thr GGT [ENA] ¢þ
>SRA1018911 SRR035082.368978 454 Sequencing (SRP001803) 316 244 - Thr GGT [SRA]
>SRA1025826 SRR035085.89432 454 Sequencing (SRP001806) 287 359 + Thr GGT [SRA]
>SRA1029707 SRR035087.167642 454 Sequencing (SRP001808) 147 75 - Thr GGT [SRA]
>SRA1035963 SRR035089.413375 454 Sequencing (SRP001810) 205 133 - Thr GGT [SRA]
>SRA1043873 SRR035092.188790 454 Sequencing (SRP001813) 365 437 + Thr GGT [SRA]
>SRA1047663 SRR035094.15486 454 Sequencing (SRP001815) 42 114 + Thr GGT [SRA]
Identical group No.654587 (3 seq.)
>SRA1017623 SRR035082.169906 454 Sequencing (SRP001803) 102 174 + Thr GGT [SRA]
>SRA1036017 SRR035089.427872 454 Sequencing (SRP001810) 285 357 + Thr GGT [SRA]
>SRA1040101 SRR035091.38644 454 Sequencing (SRP001812) 118 190 + Thr GGT [SRA]
Identical group No.672648 (3 seq.)
>WENV170604984 FUWD010439234 [FUWD] metagenome; unknown 140 212 + Thr GGT [ENA] ¢þ
>SRA1017771 SRR035082.193907 454 Sequencing (SRP001803) 565 493 - Thr GGT [SRA]
>SRA1032229 SRR035087.582720 454 Sequencing (SRP001808) 140 212 + Thr GGT [SRA]
Identical group No.711565 (5 seq.)
>WENV170627122 FUWD013231498 [FUWD] metagenome; unknown 4957 5031 + Thr GGT [ENA] ¢þ
>WENV170629815 FUWD013282622 [FUWD] metagenome; unknown 9437 9511 + Thr GGT [ENA] ¢þ
>SRA1017025 SRR035082.69771 454 Sequencing (SRP001803) 253 327 + Thr GGT [SRA]
>SRA1042531 SRR035091.403484 454 Sequencing (SRP001812) 77 3 - Thr GGT [SRA]
>SRA1044368 SRR035092.267165 454 Sequencing (SRP001813) 423 349 - Thr GGT [SRA]
Identical group No.771085 (1 seq.)
>SRA1016910 SRR035082.51260 454 Sequencing (SRP001803) 193 120 - Thr GGT [SRA]
Identical group No.771098 (1 seq.)
>SRA1017060 SRR035082.73828 454 Sequencing (SRP001803) 211 282 + Thr GGT [SRA]
Identical group No.771161 (1 seq.)
>SRA1017614 SRR035082.168237 454 Sequencing (SRP001803) 346 272 - Thr GGT [SRA]
Identical group No.771266 (1 seq.)
>SRA1018751 SRR035082.342142 454 Sequencing (SRP001803) 400 472 + Thr GGT [SRA]
Identical group No.771287 (1 seq.)
>SRA1018973 SRR035082.379788 454 Sequencing (SRP001803) 266 338 + Thr GGT [SRA]
Identical group No.833581 (1 seq.)
>SRA1018691 SRR035082.333225 454 Sequencing (SRP001803) 393 320 - Thr GGT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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