tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001808)

Anticodon = GAG

HIT: 30 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.22034 (1 seq.)
>SRA1032266 SRR035087.591662 454 Sequencing (SRP001808) 225 315 + Leu GAG [SRA]
Identical group No.32298 (6 seq.)
>WENV170622272 FUWD013095498 [FUWD] metagenome; unknown 1719 1808 + Leu GAG [ENA]
>WENV170630492 FUWD013310205 [FUWD] metagenome; unknown 1719 1808 + Leu GAG [ENA]
>WENV170724469 LSQX01306584 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5715 5627 - Leu GAG [ENA]
>WENV170978692 MTKZ01058362 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1620 1534 - Leu GAG [ENA]
>SRA1032290 SRR035087.596828 454 Sequencing (SRP001808) 229 318 + Leu GAG [SRA]
>SRA1044919 SRR035092.373077 454 Sequencing (SRP001813) 70 159 + Leu GAG [SRA]
Identical group No.46700 (4 seq.)
>WENV170677967 LDZT01010241 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3064 3152 + Leu GAG [ENA]
>SRA1032130 SRR035087.559056 454 Sequencing (SRP001808) 182 268 + Leu GAG [SRA]
>W1610613952 LGGO01000009 Unclassified candidate division WS6 bacterium 34_10 [LGGO] 3064 3152 + Leu GAG [ENA]
>W1710735035 LGGO01000009 Unclassified candidate division WS6 bacterium 34_10 [LGGO] 3064 3152 + Leu GAG [ENA]
Identical group No.47934 (6 seq.)
>W1711391315 MELJ01000203 Actinomycetota Actinobacteria bacterium RBG_13_35_12 [MELJ] 3021 3109 + Leu GAG [ENA]
>WENV170017320 BART01014044 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 282 370 + Leu GAG [ENA]
>WENV170017996 BARV01003010 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 898 810 - Leu GAG [ENA]
>WENV170623041 FUWD013134112 [FUWD] metagenome; unknown 1892 1804 - Leu GAG [ENA]
>WENV170631275 FUWD013347144 [FUWD] metagenome; unknown 1892 1804 - Leu GAG [ENA]
>SRA1030066 SRR035087.223473 454 Sequencing (SRP001808) 4 92 + Leu GAG [SRA]
Identical group No.48186 (4 seq.)
>WENV183514431 OMKS01019187 [OMKS] sediment metagenome; hot spring sediment 1129 1215 + Leu GAG [ENA]
>WENV170720135 LSQX01142177 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3141 3227 + Leu GAG [ENA]
>W1911748614 QWET01000028 Bacteroidota Mariniphaga sediminis SY21 [QWET] 9326 9240 - Leu GAG [ENA]
>SRA1029866 SRR035087.194391 454 Sequencing (SRP001808) 335 421 + Leu GAG [SRA]
Identical group No.48194 (1 seq.)
>SRA1030963 SRR035087.355200 454 Sequencing (SRP001808) 236 323 + Leu GAG [SRA]
Identical group No.48200 (2 seq.)
>WENV170695036 LGVE01036507 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 492 406 - Leu GAG [ENA]
>SRA1031249 SRR035087.399838 454 Sequencing (SRP001808) 337 251 - Leu GAG [SRA]
Identical group No.48201 (1 seq.)
>SRA1031328 SRR035087.413367 454 Sequencing (SRP001808) 290 378 + Leu GAG [SRA]
Identical group No.56239 (19 seq.)
>W1711391314 MELJ01000200 Actinomycetota Actinobacteria bacterium RBG_13_35_12 [MELJ] 266 353 + Leu GAG [ENA]
>WENV181412408 OGCK01000139 [OGCK] hot springs metagenome; hot spring sediment 10025 9938 - Leu GAG [ENA]
>WENV183514259 OMKS01014492 [OMKS] sediment metagenome; hot spring sediment 3542 3629 + Leu GAG [ENA]
>WENV170016960 BARS01033960 [BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula 678 591 - Leu GAG [ENA]
>WENV170017165 BART01000061 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 5195 5108 - Leu GAG [ENA]
>WENV170018530 BARW01034903 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 547 634 + Leu GAG [ENA]
>WENV170617477 FUWD012927361 [FUWD] metagenome; unknown 360 273 - Leu GAG [ENA]
>WENV170677044 LDZT01000752 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3 90 + Leu GAG [ENA]
>WENV170677049 LDZT01000820 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3634 3547 - Leu GAG [ENA]
>WENV170677596 LDZT01007295 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3340 3427 + Leu GAG [ENA]
>WENV170678042 LDZT01010682 [LDZT] terrestrial metagenome; oil reservoir sample SB1 11288 11375 + Leu GAG [ENA]
>WENV170679153 LDZU01008740 [LDZU] terrestrial metagenome; oil reservoir sample SB2 141308 141221 - Leu GAG [ENA]
>WENV170695669 LGVE01150065 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 991 1078 + Leu GAG [ENA]
>WENV170697705 LGVF01178258 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 8928 9015 + Leu GAG [ENA]
>WENV170698324 LGVF01313382 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1612 1699 + Leu GAG [ENA]
>W1910702381 MEYH01000047 Atribacterota Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 [MEYH] 349 436 + Leu GAG [ENA]
>W1910870332 NCRO01000229 Atribacterota Candidatus Atribacteria bacterium RS-JS1 [NCRO] 6264 6351 + Leu GAG [ENA]
>SRA1026814 SRR035085.299097 454 Sequencing (SRP001806) 208 121 - Leu GAG [SRA]
>SRA1032300 SRR035087.597979 454 Sequencing (SRP001808) 167 80 - Leu GAG [SRA]
Identical group No.56288 (11 seq.)
>WENV170624864 FUWD013188183 [FUWD] metagenome; unknown 548 635 + Leu GAG [ENA]
>WENV170633130 FUWD013391978 [FUWD] metagenome; unknown 548 635 + Leu GAG [ENA]
>SRA1030081 SRR035087.224642 454 Sequencing (SRP001808) 131 218 + Leu GAG [SRA]
>SRA1030887 SRR035087.343177 454 Sequencing (SRP001808) 111 24 - Leu GAG [SRA]
>SRA1033407 SRR035088.248512 454 Sequencing (SRP001809) 125 212 + Leu GAG [SRA]
>SRA1034060 SRR035088.471419 454 Sequencing (SRP001809) 45 131 + Leu GAG [SRA]
>SRA1036249 SRR035089.480215 454 Sequencing (SRP001810) 297 384 + Leu GAG [SRA]
>SRA1038331 SRR035090.289082 454 Sequencing (SRP001811) 335 422 + Leu GAG [SRA]
>SRA1049361 SRR035095.63976 454 Sequencing (SRP001816) 305 218 - Leu GAG [SRA]
>SRA1049771 SRR035095.136865 454 Sequencing (SRP001816) 306 219 - Leu GAG [SRA]
>SRA1050109 SRR035095.194417 454 Sequencing (SRP001816) 281 368 + Leu GAG [SRA]
Identical group No.58909 (1 seq.)
>SRA1032371 SRR035087.614863 454 Sequencing (SRP001808) 91 178 + Leu GAG [SRA]
Identical group No.73258 (11 seq.)
>WENV183514211 OMKS01013755 [OMKS] sediment metagenome; hot spring sediment 3508 3594 + Leu GAG [ENA]
>WENV170627197 FUWD013231994 [FUWD] metagenome; unknown 14871 14785 - Leu GAG [ENA]
>WENV170632582 FUWD013384729 [FUWD] metagenome; unknown 14871 14785 - Leu GAG [ENA]
>SRA1026073 SRR035085.137648 454 Sequencing (SRP001806) 37 123 + Leu GAG [SRA]
>SRA1029162 SRR035087.85422 454 Sequencing (SRP001808) 156 242 + Leu GAG [SRA]
>SRA1029475 SRR035087.133174 454 Sequencing (SRP001808) 17 103 + Leu GAG [SRA]
>SRA1031995 SRR035087.528302 454 Sequencing (SRP001808) 148 234 + Leu GAG [SRA]
>SRA1034435 SRR035089.94062 454 Sequencing (SRP001810) 428 342 - Leu GAG [SRA]
>SRA1034834 SRR035089.182807 454 Sequencing (SRP001810) 391 477 + Leu GAG [SRA]
>SRA1048199 SRR035094.127835 454 Sequencing (SRP001815) 92 178 + Leu GAG [SRA]
>SRA1048694 SRR035094.229126 454 Sequencing (SRP001815) 165 79 - Leu GAG [SRA]
Identical group No.73313 (6 seq.)
>WENV170603294 FUWD010299293 [FUWD] metagenome; unknown 474 388 - Leu GAG [ENA]
>WENV170605016 FUWD010441483 [FUWD] metagenome; unknown 561 475 - Leu GAG [ENA]
>SRA1029122 SRR035087.78137 454 Sequencing (SRP001808) 209 295 + Leu GAG [SRA]
>SRA1033784 SRR035088.353947 454 Sequencing (SRP001809) 78 164 + Leu GAG [SRA]
>SRA1035018 SRR035089.219903 454 Sequencing (SRP001810) 109 195 + Leu GAG [SRA]
>SRA1049890 SRR035095.154948 454 Sequencing (SRP001816) 280 366 + Leu GAG [SRA]
Identical group No.73354 (5 seq.)
>WENV170613467 FUWD012806962 [FUWD] metagenome; unknown 645 731 + Leu GAG [ENA]
>SRA1018514 SRR035082.303149 454 Sequencing (SRP001803) 483 395 - Leu GAG [SRA]
>SRA1032222 SRR035087.580608 454 Sequencing (SRP001808) 117 31 - Leu GAG [SRA]
>SRA1036258 SRR035089.481904 454 Sequencing (SRP001810) 53 139 + Leu GAG [SRA]
>SRA1043157 SRR035092.60359 454 Sequencing (SRP001813) 183 269 + Leu GAG [SRA]
Identical group No.77535 (5 seq.)
>WENV170622515 FUWD013107528 [FUWD] metagenome; unknown 447 361 - Leu GAG [ENA]
>WENV170630740 FUWD013321846 [FUWD] metagenome; unknown 447 361 - Leu GAG [ENA]
>SRA1029932 SRR035087.204561 454 Sequencing (SRP001808) 183 97 - Leu GAG [SRA]
>SRA1033801 SRR035088.359371 454 Sequencing (SRP001809) 246 160 - Leu GAG [SRA]
>SRA1042160 SRR035091.348270 454 Sequencing (SRP001812) 214 128 - Leu GAG [SRA]
Identical group No.77575 (9 seq.)
>WENV170624453 FUWD013181970 [FUWD] metagenome; unknown 3116 3030 - Leu GAG [ENA]
>WENV170632740 FUWD013386831 [FUWD] metagenome; unknown 3116 3030 - Leu GAG [ENA]
>SRA1031492 SRR035087.438152 454 Sequencing (SRP001808) 268 354 + Leu GAG [SRA]
>SRA1048019 SRR035094.91215 454 Sequencing (SRP001815) 72 158 + Leu GAG [SRA]
>SRA1048255 SRR035094.135450 454 Sequencing (SRP001815) 161 247 + Leu GAG [SRA]
>SRA1049577 SRR035095.97396 454 Sequencing (SRP001816) 259 345 + Leu GAG [SRA]
>SRA1049609 SRR035095.104519 454 Sequencing (SRP001816) 350 264 - Leu GAG [SRA]
>SRA1049722 SRR035095.126938 454 Sequencing (SRP001816) 368 454 + Leu GAG [SRA]
>SRA1050601 SRR035095.299655 454 Sequencing (SRP001816) 150 236 + Leu GAG [SRA]
Identical group No.77585 (3 seq.)
>WENV170607705 FUWD010850498 [FUWD] metagenome; unknown 254 171 - Leu GAG [ENA]
>SRA1031836 SRR035087.496928 454 Sequencing (SRP001808) 314 397 + Leu GAG [SRA]
>SRA1032282 SRR035087.594770 454 Sequencing (SRP001808) 232 315 + Leu GAG [SRA]
Identical group No.77590 (6 seq.)
>W1711584363 MNYJ01000192 Thermodesulfobacteriota Desulfobacteraceae bacterium CG2_30_51_40 [MNYJ] 10370 10456 + Leu GAG [ENA]
>WENV170605125 FUWD010451742 [FUWD] metagenome; unknown 181 267 + Leu GAG [ENA]
>SRA1031935 SRR035087.515567 454 Sequencing (SRP001808) 164 78 - Leu GAG [SRA]
>SRA1033321 SRR035088.223543 454 Sequencing (SRP001809) 234 148 - Leu GAG [SRA]
>SRA1048997 SRR035094.307632 454 Sequencing (SRP001815) 132 46 - Leu GAG [SRA]
>SRA1049993 SRR035095.173437 454 Sequencing (SRP001816) 57 143 + Leu GAG [SRA]
Identical group No.77622 (1 seq.)
>SRA1030182 SRR035087.239272 454 Sequencing (SRP001808) 123 208 + Leu GAG [SRA]
Identical group No.100013 (7 seq.)
>WENV170692737 LGOV01025506 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 1294 1379 + Leu GAG [ENA]
>WENV170693333 LGVC01003415 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 6980 6897 - Leu GAG [ENA]
>WENV170693984 LGVD01002956 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 597 680 + Leu GAG [ENA]
>WENV170697130 LGVF01084809 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 397 314 - Leu GAG [ENA]
>WENV170698321 LGVF01312976 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 534 451 - Leu GAG [ENA]
>SRA1026472 SRR035085.213234 454 Sequencing (SRP001806) 110 195 + Leu GAG [SRA]
>SRA1031268 SRR035087.402992 454 Sequencing (SRP001808) 315 398 + Leu GAG [SRA]
Identical group No.100073 (7 seq.)
>WENV170611587 FUWD012353642 [FUWD] metagenome; unknown 251 166 - Leu GAG [ENA]
>WENV170622492 FUWD013107170 [FUWD] metagenome; unknown 1386 1301 - Leu GAG [ENA]
>WENV170630716 FUWD013321506 [FUWD] metagenome; unknown 1386 1301 - Leu GAG [ENA]
>SRA1018198 SRR035082.254790 454 Sequencing (SRP001803) 253 168 - Leu GAG [SRA]
>SRA1018504 SRR035082.301736 454 Sequencing (SRP001803) 498 413 - Leu GAG [SRA]
>SRA1025545 SRR035085.36764 454 Sequencing (SRP001806) 92 177 + Leu GAG [SRA]
>SRA1030274 SRR035087.254729 454 Sequencing (SRP001808) 137 52 - Leu GAG [SRA]
Identical group No.102779 (6 seq.)
>WENV170600889 FUWD010146636 [FUWD] metagenome; unknown 506 424 - Leu GAG [ENA]
>WENV170612498 FUWD012623554 [FUWD] metagenome; unknown 21 103 + Leu GAG [ENA]
>SRA1017152 SRR035082.89875 454 Sequencing (SRP001803) 305 387 + Leu GAG [SRA]
>SRA1028832 SRR035087.16504 454 Sequencing (SRP001808) 9 91 + Leu GAG [SRA]
>SRA1039992 SRR035091.11502 454 Sequencing (SRP001812) 506 424 - Leu GAG [SRA]
>SRA1042770 SRR035091.444255 454 Sequencing (SRP001812) 86 4 - Leu GAG [SRA]
Identical group No.102817 (1 seq.)
>SRA1031136 SRR035087.379163 454 Sequencing (SRP001808) 11 94 + Leu GAG [SRA]
Identical group No.102829 (2 seq.)
>SRA1031713 SRR035087.475906 454 Sequencing (SRP001808) 223 308 + Leu GAG [SRA]
>SRA1050123 SRR035095.195724 454 Sequencing (SRP001816) 259 344 + Leu GAG [SRA]
Identical group No.122105 (1 seq.)
>SRA1029191 SRR035087.89864 454 Sequencing (SRP001808) 111 193 + Leu GAG [SRA]
Identical group No.122133 (1 seq.)
>SRA1030949 SRR035087.353503 454 Sequencing (SRP001808) 229 148 - Leu GAG [SRA]
Identical group No.141978 (3 seq.)
>WENV170611969 FUWD012471615 [FUWD] metagenome; unknown 82 1 - Leu GAG [ENA]
>SRA1029238 SRR035087.96338 454 Sequencing (SRP001808) 82 1 - Leu GAG [SRA]
>SRA1031683 SRR035087.471071 454 Sequencing (SRP001808) 82 1 - Leu GAG [SRA]
Identical group No.141987 (1 seq.)
>SRA1030662 SRR035087.311233 454 Sequencing (SRP001808) 347 428 + Leu GAG [SRA]
Identical group No.141997 (1 seq.)
>SRA1032335 SRR035087.607953 454 Sequencing (SRP001808) 151 234 + Leu GAG [SRA]
Identical group No.196248 (1 seq.)
>SRA1030227 SRR035087.245929 454 Sequencing (SRP001808) 371 295 - Leu GAG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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