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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001809)
Anticodon = CCG
HIT:
15 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.272563 (11 seq.)
>WENV170624130
FUWD013175373
[FUWD] metagenome; unknown
8225
8301
+
Arg
CCG
[ENA]
¢þ
>WENV170632412
FUWD013381548
[FUWD] metagenome; unknown
8225
8301
+
Arg
CCG
[ENA]
¢þ
>SRA1030156
SRR035087.234854
454 Sequencing (SRP001808)
71
146
+
Arg
CCG
[SRA]
>SRA1033686
SRR035088.325679
454 Sequencing (SRP001809)
473
397
-
Arg
CCG
[SRA]
>SRA1034478
SRR035089.105695
454 Sequencing (SRP001810)
231
307
+
Arg
CCG
[SRA]
>SRA1035021
SRR035089.220716
454 Sequencing (SRP001810)
173
248
+
Arg
CCG
[SRA]
>SRA1047657
SRR035094.13338
454 Sequencing (SRP001815)
214
290
+
Arg
CCG
[SRA]
>SRA1047683
SRR035094.19607
454 Sequencing (SRP001815)
296
220
-
Arg
CCG
[SRA]
>SRA1048093
SRR035094.107205
454 Sequencing (SRP001815)
407
331
-
Arg
CCG
[SRA]
>SRA1048166
SRR035094.121140
454 Sequencing (SRP001815)
297
221
-
Arg
CCG
[SRA]
>SRA1049312
SRR035095.54840
454 Sequencing (SRP001816)
162
86
-
Arg
CCG
[SRA]
Identical group No.272673 (5 seq.)
>W1711065926
LSCC01000002
Unclassified
Marinimicrobia bacterium TCS52 [LSCC]
9381
9455
+
Arg
CCG
[ENA]
¡û
>SRA1033434
SRR035088.256766
454 Sequencing (SRP001809)
17
91
+
Arg
CCG
[SRA]
>SRA1035067
SRR035089.230681
454 Sequencing (SRP001810)
16
90
+
Arg
CCG
[SRA]
>SRA1036362
SRR035089.501625
454 Sequencing (SRP001810)
36
110
+
Arg
CCG
[SRA]
>W1610906540
LSCC01000002
Unclassified
Marinimicrobia bacterium TCS52 [LSCC]
9381
9455
+
Arg
CCG
[ENA]
¡û
Identical group No.272879 (8 seq.)
>WENV170625174
FUWD013193127
[FUWD] metagenome; unknown
362
286
-
Arg
CCG
[ENA]
¢þ
>WENV170633430
FUWD013396202
[FUWD] metagenome; unknown
362
286
-
Arg
CCG
[ENA]
¢þ
>SRA1030496
SRR035087.288032
454 Sequencing (SRP001808)
449
373
-
Arg
CCG
[SRA]
>SRA1032668
SRR035088.75765
454 Sequencing (SRP001809)
23
99
+
Arg
CCG
[SRA]
>SRA1032861
SRR035088.117854
454 Sequencing (SRP001809)
466
390
-
Arg
CCG
[SRA]
>SRA1036331
SRR035089.496812
454 Sequencing (SRP001810)
294
218
-
Arg
CCG
[SRA]
>SRA1036540
SRR035089.544093
454 Sequencing (SRP001810)
63
139
+
Arg
CCG
[SRA]
>SRA1048486
SRR035094.184750
454 Sequencing (SRP001815)
254
178
-
Arg
CCG
[SRA]
Identical group No.332196 (3 seq.)
>WENV183800854
PVBE010623032
[PVBE] marine metagenome; water
5664
5740
+
Arg
CCG
[ENA]
¢þ
>SRA1033576
SRR035088.292722
454 Sequencing (SRP001809)
276
200
-
Arg
CCG
[SRA]
>SRA1033745
SRR035088.343777
454 Sequencing (SRP001809)
276
200
-
Arg
CCG
[SRA]
Identical group No.357543 (4 seq.)
>WENV170599392
FUWD010073229
[FUWD] metagenome; unknown
15
91
+
Arg
CCG
[ENA]
¢þ
>SRA1032894
SRR035088.124021
454 Sequencing (SRP001809)
101
177
+
Arg
CCG
[SRA]
>SRA1033473
SRR035088.268160
454 Sequencing (SRP001809)
15
91
+
Arg
CCG
[SRA]
>SRA1049287
SRR035095.50530
454 Sequencing (SRP001816)
97
173
+
Arg
CCG
[SRA]
Identical group No.357796 (3 seq.)
>WENV170605171
FUWD010455907
[FUWD] metagenome; unknown
366
290
-
Arg
CCG
[ENA]
¢þ
>SRA1033102
SRR035088.174917
454 Sequencing (SRP001809)
178
254
+
Arg
CCG
[SRA]
>SRA1038381
SRR035090.294811
454 Sequencing (SRP001811)
243
319
+
Arg
CCG
[SRA]
Identical group No.358683 (7 seq.)
>WENV170621363
FUWD013056620
[FUWD] metagenome; unknown
646
570
-
Arg
CCG
[ENA]
¢þ
>WENV170629542
FUWD013273023
[FUWD] metagenome; unknown
646
570
-
Arg
CCG
[ENA]
¢þ
>SRA1033019
SRR035088.152866
454 Sequencing (SRP001809)
114
190
+
Arg
CCG
[SRA]
>SRA1041901
SRR035091.313159
454 Sequencing (SRP001812)
94
18
-
Arg
CCG
[SRA]
>SRA1042684
SRR035091.429478
454 Sequencing (SRP001812)
94
18
-
Arg
CCG
[SRA]
>SRA1044759
SRR035092.335705
454 Sequencing (SRP001813)
293
217
-
Arg
CCG
[SRA]
>SRA1050490
SRR035095.274282
454 Sequencing (SRP001816)
223
147
-
Arg
CCG
[SRA]
Identical group No.415323 (3 seq.)
>SRA1032733
SRR035088.89581
454 Sequencing (SRP001809)
365
289
-
Arg
CCG
[SRA]
>SRA1033370
SRR035088.236996
454 Sequencing (SRP001809)
16
92
+
Arg
CCG
[SRA]
>SRA1033561
SRR035088.289204
454 Sequencing (SRP001809)
340
264
-
Arg
CCG
[SRA]
Identical group No.415361 (1 seq.)
>SRA1033214
SRR035088.197748
454 Sequencing (SRP001809)
193
269
+
Arg
CCG
[SRA]
Identical group No.415372 (1 seq.)
>SRA1033379
SRR035088.240134
454 Sequencing (SRP001809)
170
246
+
Arg
CCG
[SRA]
Identical group No.453471 (135 seq.)
>C018272
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1162448
1162376
-
Arg
CCG
[Ensembl]
¡û
>WENV170614044
FUWD012824125
[FUWD] metagenome; unknown
12024
12097
+
Arg
CCG
[ENA]
¢þ
>W09103340
AAJD01000001
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
159522
159449
-
Arg
CCG
[ENA]
¡û
>SRA1016908
SRR035082.50899
454 Sequencing (SRP001803)
296
223
-
Arg
CCG
[SRA]
>SRA1019961
SRR035083.30806
454 Sequencing (SRP001804)
201
274
+
Arg
CCG
[SRA]
>SRA1020080
SRR035083.55369
454 Sequencing (SRP001804)
238
165
-
Arg
CCG
[SRA]
>SRA1020130
SRR035083.60883
454 Sequencing (SRP001804)
61
134
+
Arg
CCG
[SRA]
>SRA1020133
SRR035083.61071
454 Sequencing (SRP001804)
138
211
+
Arg
CCG
[SRA]
>SRA1020289
SRR035083.90390
454 Sequencing (SRP001804)
425
498
+
Arg
CCG
[SRA]
>SRA1020301
SRR035083.93011
454 Sequencing (SRP001804)
203
276
+
Arg
CCG
[SRA]
>SRA1020397
SRR035083.108863
454 Sequencing (SRP001804)
373
446
+
Arg
CCG
[SRA]
>SRA1020477
SRR035083.120945
454 Sequencing (SRP001804)
358
431
+
Arg
CCG
[SRA]
>SRA1020527
SRR035083.130659
454 Sequencing (SRP001804)
316
243
-
Arg
CCG
[SRA]
>SRA1020628
SRR035083.142742
454 Sequencing (SRP001804)
318
391
+
Arg
CCG
[SRA]
>SRA1020699
SRR035083.153653
454 Sequencing (SRP001804)
238
311
+
Arg
CCG
[SRA]
>SRA1020851
SRR035083.173092
454 Sequencing (SRP001804)
284
211
-
Arg
CCG
[SRA]
>SRA1020911
SRR035083.183841
454 Sequencing (SRP001804)
284
211
-
Arg
CCG
[SRA]
>SRA1020950
SRR035083.189418
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021010
SRR035083.197302
454 Sequencing (SRP001804)
436
509
+
Arg
CCG
[SRA]
>SRA1021055
SRR035083.204235
454 Sequencing (SRP001804)
319
392
+
Arg
CCG
[SRA]
>SRA1021059
SRR035083.204420
454 Sequencing (SRP001804)
203
276
+
Arg
CCG
[SRA]
>SRA1021083
SRR035083.206128
454 Sequencing (SRP001804)
285
212
-
Arg
CCG
[SRA]
>SRA1021188
SRR035083.221267
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021235
SRR035083.227497
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021313
SRR035083.240447
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021359
SRR035083.249816
454 Sequencing (SRP001804)
324
251
-
Arg
CCG
[SRA]
>SRA1021597
SRR035083.278813
454 Sequencing (SRP001804)
317
244
-
Arg
CCG
[SRA]
>SRA1021613
SRR035083.281562
454 Sequencing (SRP001804)
205
280
+
Arg
CCG
[SRA]
>SRA1021654
SRR035083.287624
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1021767
SRR035083.306552
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021791
SRR035083.310429
454 Sequencing (SRP001804)
134
207
+
Arg
CCG
[SRA]
>SRA1021809
SRR035083.312606
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021823
SRR035083.313741
454 Sequencing (SRP001804)
403
476
+
Arg
CCG
[SRA]
>SRA1021856
SRR035083.319123
454 Sequencing (SRP001804)
417
344
-
Arg
CCG
[SRA]
>SRA1021858
SRR035083.319341
454 Sequencing (SRP001804)
390
317
-
Arg
CCG
[SRA]
>SRA1021958
SRR035083.332170
454 Sequencing (SRP001804)
317
244
-
Arg
CCG
[SRA]
>SRA1021994
SRR035083.336030
454 Sequencing (SRP001804)
40
113
+
Arg
CCG
[SRA]
>SRA1022004
SRR035083.338443
454 Sequencing (SRP001804)
256
329
+
Arg
CCG
[SRA]
>SRA1022050
SRR035083.346349
454 Sequencing (SRP001804)
46
119
+
Arg
CCG
[SRA]
>SRA1022070
SRR035083.348780
454 Sequencing (SRP001804)
434
507
+
Arg
CCG
[SRA]
>SRA1022302
SRR035083.385488
454 Sequencing (SRP001804)
59
132
+
Arg
CCG
[SRA]
>SRA1022385
SRR035083.398739
454 Sequencing (SRP001804)
40
113
+
Arg
CCG
[SRA]
>SRA1022403
SRR035083.400853
454 Sequencing (SRP001804)
257
330
+
Arg
CCG
[SRA]
>SRA1022407
SRR035083.401484
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1022469
SRR035083.409819
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1022505
SRR035083.415392
454 Sequencing (SRP001804)
263
190
-
Arg
CCG
[SRA]
>SRA1022553
SRR035083.423374
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1022557
SRR035083.423683
454 Sequencing (SRP001804)
376
303
-
Arg
CCG
[SRA]
>SRA1022598
SRR035083.430373
454 Sequencing (SRP001804)
256
329
+
Arg
CCG
[SRA]
>SRA1022677
SRR035083.440579
454 Sequencing (SRP001804)
213
140
-
Arg
CCG
[SRA]
>SRA1022704
SRR035083.444502
454 Sequencing (SRP001804)
345
272
-
Arg
CCG
[SRA]
>SRA1022762
SRR035083.455799
454 Sequencing (SRP001804)
198
271
+
Arg
CCG
[SRA]
>SRA1022813
SRR035083.465067
454 Sequencing (SRP001804)
372
299
-
Arg
CCG
[SRA]
>SRA1022876
SRR035083.477003
454 Sequencing (SRP001804)
296
223
-
Arg
CCG
[SRA]
>SRA1022893
SRR035083.480252
454 Sequencing (SRP001804)
345
272
-
Arg
CCG
[SRA]
>SRA1022905
SRR035083.483936
454 Sequencing (SRP001804)
134
207
+
Arg
CCG
[SRA]
>SRA1023010
SRR035083.504277
454 Sequencing (SRP001804)
135
208
+
Arg
CCG
[SRA]
>SRA1023068
SRR035083.514397
454 Sequencing (SRP001804)
103
30
-
Arg
CCG
[SRA]
>SRA1032509
SRR035088.31138
454 Sequencing (SRP001809)
61
134
+
Arg
CCG
[SRA]
>SRA1032724
SRR035088.87553
454 Sequencing (SRP001809)
62
135
+
Arg
CCG
[SRA]
>SRA1032770
SRR035088.99672
454 Sequencing (SRP001809)
317
390
+
Arg
CCG
[SRA]
>SRA1033789
SRR035088.355741
454 Sequencing (SRP001809)
158
231
+
Arg
CCG
[SRA]
>SRA1034236
SRR035089.32247
454 Sequencing (SRP001810)
183
256
+
Arg
CCG
[SRA]
>SRA1036151
SRR035089.456956
454 Sequencing (SRP001810)
202
275
+
Arg
CCG
[SRA]
>SRA1036793
SRR035090.6110
454 Sequencing (SRP001811)
167
240
+
Arg
CCG
[SRA]
>SRA1036824
SRR035090.16077
454 Sequencing (SRP001811)
37
110
+
Arg
CCG
[SRA]
>SRA1036826
SRR035090.17080
454 Sequencing (SRP001811)
168
241
+
Arg
CCG
[SRA]
>SRA1036902
SRR035090.35397
454 Sequencing (SRP001811)
171
244
+
Arg
CCG
[SRA]
>SRA1036939
SRR035090.41602
454 Sequencing (SRP001811)
66
139
+
Arg
CCG
[SRA]
>SRA1037144
SRR035090.81767
454 Sequencing (SRP001811)
67
140
+
Arg
CCG
[SRA]
>SRA1037221
SRR035090.95102
454 Sequencing (SRP001811)
270
343
+
Arg
CCG
[SRA]
>SRA1037315
SRR035090.112700
454 Sequencing (SRP001811)
356
283
-
Arg
CCG
[SRA]
>SRA1037330
SRR035090.117293
454 Sequencing (SRP001811)
120
193
+
Arg
CCG
[SRA]
>SRA1037394
SRR035090.127997
454 Sequencing (SRP001811)
68
141
+
Arg
CCG
[SRA]
>SRA1037456
SRR035090.137468
454 Sequencing (SRP001811)
359
432
+
Arg
CCG
[SRA]
>SRA1037675
SRR035090.172947
454 Sequencing (SRP001811)
68
141
+
Arg
CCG
[SRA]
>SRA1037679
SRR035090.173477
454 Sequencing (SRP001811)
115
188
+
Arg
CCG
[SRA]
>SRA1037726
SRR035090.181223
454 Sequencing (SRP001811)
273
200
-
Arg
CCG
[SRA]
>SRA1037779
SRR035090.192485
454 Sequencing (SRP001811)
83
156
+
Arg
CCG
[SRA]
>SRA1037802
SRR035090.198784
454 Sequencing (SRP001811)
96
169
+
Arg
CCG
[SRA]
>SRA1038127
SRR035090.249948
454 Sequencing (SRP001811)
267
194
-
Arg
CCG
[SRA]
>SRA1038297
SRR035090.283613
454 Sequencing (SRP001811)
149
76
-
Arg
CCG
[SRA]
>SRA1038315
SRR035090.285968
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1038346
SRR035090.289974
454 Sequencing (SRP001811)
266
193
-
Arg
CCG
[SRA]
>SRA1038353
SRR035090.290636
454 Sequencing (SRP001811)
355
428
+
Arg
CCG
[SRA]
>SRA1038375
SRR035090.293296
454 Sequencing (SRP001811)
221
294
+
Arg
CCG
[SRA]
>SRA1038395
SRR035090.297076
454 Sequencing (SRP001811)
216
289
+
Arg
CCG
[SRA]
>SRA1038426
SRR035090.302379
454 Sequencing (SRP001811)
228
301
+
Arg
CCG
[SRA]
>SRA1038512
SRR035090.318948
454 Sequencing (SRP001811)
309
382
+
Arg
CCG
[SRA]
>SRA1038544
SRR035090.325249
454 Sequencing (SRP001811)
228
301
+
Arg
CCG
[SRA]
>SRA1038624
SRR035090.338776
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1038688
SRR035090.350279
454 Sequencing (SRP001811)
267
194
-
Arg
CCG
[SRA]
>SRA1038721
SRR035090.354504
454 Sequencing (SRP001811)
197
270
+
Arg
CCG
[SRA]
>SRA1038840
SRR035090.377478
454 Sequencing (SRP001811)
182
109
-
Arg
CCG
[SRA]
>SRA1038875
SRR035090.385726
454 Sequencing (SRP001811)
253
326
+
Arg
CCG
[SRA]
>SRA1039029
SRR035090.410699
454 Sequencing (SRP001811)
355
282
-
Arg
CCG
[SRA]
>SRA1039047
SRR035090.416215
454 Sequencing (SRP001811)
355
428
+
Arg
CCG
[SRA]
>SRA1039062
SRR035090.417471
454 Sequencing (SRP001811)
404
477
+
Arg
CCG
[SRA]
>SRA1039076
SRR035090.420535
454 Sequencing (SRP001811)
95
168
+
Arg
CCG
[SRA]
>SRA1039085
SRR035090.421737
454 Sequencing (SRP001811)
30
103
+
Arg
CCG
[SRA]
>SRA1039091
SRR035090.423292
454 Sequencing (SRP001811)
309
382
+
Arg
CCG
[SRA]
>SRA1039126
SRR035090.429173
454 Sequencing (SRP001811)
311
384
+
Arg
CCG
[SRA]
>SRA1039155
SRR035090.433214
454 Sequencing (SRP001811)
31
104
+
Arg
CCG
[SRA]
>SRA1039182
SRR035090.438183
454 Sequencing (SRP001811)
98
171
+
Arg
CCG
[SRA]
>SRA1039189
SRR035090.439489
454 Sequencing (SRP001811)
256
329
+
Arg
CCG
[SRA]
>SRA1039201
SRR035090.442685
454 Sequencing (SRP001811)
265
192
-
Arg
CCG
[SRA]
>SRA1039251
SRR035090.452760
454 Sequencing (SRP001811)
199
272
+
Arg
CCG
[SRA]
>SRA1039252
SRR035090.452853
454 Sequencing (SRP001811)
115
188
+
Arg
CCG
[SRA]
>SRA1039295
SRR035090.460955
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039310
SRR035090.464945
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039346
SRR035090.473552
454 Sequencing (SRP001811)
337
264
-
Arg
CCG
[SRA]
>SRA1039364
SRR035090.478995
454 Sequencing (SRP001811)
132
205
+
Arg
CCG
[SRA]
>SRA1039463
SRR035090.496980
454 Sequencing (SRP001811)
126
199
+
Arg
CCG
[SRA]
>SRA1039552
SRR035090.515169
454 Sequencing (SRP001811)
321
248
-
Arg
CCG
[SRA]
>SRA1039652
SRR035090.537238
454 Sequencing (SRP001811)
323
250
-
Arg
CCG
[SRA]
>SRA1039688
SRR035090.546000
454 Sequencing (SRP001811)
351
278
-
Arg
CCG
[SRA]
>SRA1039710
SRR035090.551336
454 Sequencing (SRP001811)
116
189
+
Arg
CCG
[SRA]
>SRA1039714
SRR035090.552416
454 Sequencing (SRP001811)
208
281
+
Arg
CCG
[SRA]
>SRA1039729
SRR035090.555073
454 Sequencing (SRP001811)
97
170
+
Arg
CCG
[SRA]
>SRA1039866
SRR035090.587255
454 Sequencing (SRP001811)
166
93
-
Arg
CCG
[SRA]
>SRA1039887
SRR035090.592906
454 Sequencing (SRP001811)
86
159
+
Arg
CCG
[SRA]
>SRA1039912
SRR035090.600864
454 Sequencing (SRP001811)
62
135
+
Arg
CCG
[SRA]
>SRA1039964
SRR035090.615230
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039974
SRR035091.5765
454 Sequencing (SRP001812)
166
93
-
Arg
CCG
[SRA]
>SRA1040512
SRR035091.107739
454 Sequencing (SRP001812)
102
175
+
Arg
CCG
[SRA]
>SRA1041804
SRR035091.297277
454 Sequencing (SRP001812)
72
145
+
Arg
CCG
[SRA]
>SRA1053496
SRR035098.418373
454 Sequencing (SRP001819)
193
266
+
Arg
CCG
[SRA]
>SRA1054103
SRR035099.57663
454 Sequencing (SRP001820)
284
211
-
Arg
CCG
[SRA]
>SRA1054250
SRR035099.92469
454 Sequencing (SRP001820)
104
31
-
Arg
CCG
[SRA]
>SRA1054385
SRR035099.120700
454 Sequencing (SRP001820)
243
170
-
Arg
CCG
[SRA]
>SRA1054390
SRR035099.121407
454 Sequencing (SRP001820)
196
269
+
Arg
CCG
[SRA]
>SRA1054440
SRR035099.133547
454 Sequencing (SRP001820)
329
256
-
Arg
CCG
[SRA]
>SRA1054601
SRR035099.171058
454 Sequencing (SRP001820)
111
184
+
Arg
CCG
[SRA]
>SRA1054634
SRR035099.180282
454 Sequencing (SRP001820)
381
308
-
Arg
CCG
[SRA]
>SRA1054715
SRR035099.194092
454 Sequencing (SRP001820)
67
140
+
Arg
CCG
[SRA]
Identical group No.501837 (4 seq.)
>WENV170017450
BART01029813
[BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula
662
737
+
Arg
CCG
[ENA]
¢þ
>WENV170225805
CEQE01148950
[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
378
303
-
Arg
CCG
[ENA]
¢þ
>WENV170673527
LAZR01017018
[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
2524
2599
+
Arg
CCG
[ENA]
¢þ
>SRA1034148
SRR035088.509846
454 Sequencing (SRP001809)
289
364
+
Arg
CCG
[SRA]
Identical group No.512644 (14 seq.)
>W131208420
ATHJ01000076
Thermodesulfobacteriota
Desulfococcus multivorans DSM 2059 [ATHJ]
172338
172413
+
Arg
CCG
[ENA]
¡û
>C171038086
CP015381
Thermodesulfobacteriota
Desulfococcus multivorans DSM 2059 [CP015381]
1405893
1405818
-
Arg
CCG
-
¡û
>C171100892
CP019913
Thermodesulfobacteriota
Desulfococcus multivorans DSM 2059 [CP019913]
1406246
1406171
-
Arg
CCG
-
¡û
>WENV180274928
OBHO01012281
[OBHO] metagenome; water
98
173
+
Arg
CCG
[ENA]
¢þ
>WENV180346141
OBLN01030328
[OBLN] sediment metagenome; sediment
585
660
+
Arg
CCG
[ENA]
¢þ
>WENV170623105
FUWD013136630
[FUWD] metagenome; unknown
695
770
+
Arg
CCG
[ENA]
¢þ
>WENV170697367
LGVF01122655
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
223
148
-
Arg
CCG
[ENA]
¢þ
>SRA1033684
SRR035088.324319
454 Sequencing (SRP001809)
45
120
+
Arg
CCG
[SRA]
>SRA1047772
SRR035094.38497
454 Sequencing (SRP001815)
396
321
-
Arg
CCG
[SRA]
>SRA1049146
SRR035095.28072
454 Sequencing (SRP001816)
351
426
+
Arg
CCG
[SRA]
>SRA1049192
SRR035095.35150
454 Sequencing (SRP001816)
211
286
+
Arg
CCG
[SRA]
>SRA1049631
SRR035095.108085
454 Sequencing (SRP001816)
211
286
+
Arg
CCG
[SRA]
>SRA1050312
SRR035095.235400
454 Sequencing (SRP001816)
212
287
+
Arg
CCG
[SRA]
>W1710600539
FUWN01000006
Thermodesulfobacteriota
Desulfococcus multivorans DSM 2059 [FUWN]
46476
46401
-
Arg
CCG
[ENA]
¡û
Identical group No.612344 (1 seq.)
>SRA1032869
SRR035088.119537
454 Sequencing (SRP001809)
58
132
+
Arg
CCG
[SRA]
Identical group No.727110 (2 seq.)
>SRA1032628
SRR035088.66713
454 Sequencing (SRP001809)
287
358
+
Arg
CCG
[SRA]
>SRA1041998
SRR035091.325337
454 Sequencing (SRP001812)
325
254
-
Arg
CCG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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