tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = CCT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.201326 (23 seq.)
>W1710791153 LJNJ01000369 Gammaproteobacteria Gammaproteobacteria bacterium SG8_11 [LJNJ] 902 826 - Arg CCT [ENA] ¡û
>W1710798663 LJTU01000020 Acidithiobacillia Acidithiobacillales bacterium SG8_45 [LJTU] 2351 2275 - Arg CCT [ENA] ¡û
>WENV180056368 MPLW02027724 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 1281 1357 + Arg CCT [ENA] ¢þ
>WENV180062675 MPLX02301921 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 3163 3239 + Arg CCT [ENA] ¢þ
>WENV180065971 MPLY02099805 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 3350 3274 - Arg CCT [ENA] ¢þ
>WENV180068447 MPLZ02048747 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 2594 2518 - Arg CCT [ENA] ¢þ
>WENV180072317 MPMA02013547 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 2594 2518 - Arg CCT [ENA] ¢þ
>WENV180079039 MPMB02139508 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 613 689 + Arg CCT [ENA] ¢þ
>WENV180093175 MPMF02305098 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 3163 3239 + Arg CCT [ENA] ¢þ
>WENV183794229 PVBE010079447 [PVBE] marine metagenome; water 3386 3310 - Arg CCT [ENA] ¢þ
>WENV170203918 CEPS01096643 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2939 3015 + Arg CCT [ENA] ¢þ
>WENV170208675 CEPV01009660 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6483 6407 - Arg CCT [ENA] ¢þ
>WENV170321313 CESR01044480 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 588 512 - Arg CCT [ENA] ¢þ
>WENV170375389 CETT01282988 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 61 137 + Arg CCT [ENA] ¢þ
>WENV170383802 CETX01145213 [CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6263 6339 + Arg CCT [ENA] ¢þ
>WENV170394567 CEUC01040138 [CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1213 1137 - Arg CCT [ENA] ¢þ
>WENV170397172 CEUD01031903 [CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 224 300 + Arg CCT [ENA] ¢þ
>WENV170613979 FUWD012823248 [FUWD] metagenome; unknown 3112 3188 + Arg CCT [ENA] ¢þ
>WENV170945803 MDUQ01001360 [MDUQ] marine metagenome; 100 m water sample from station 6 2232 2156 - Arg CCT [ENA] ¢þ
>WENV170946280 MDUR01003204 [MDUR] marine metagenome; 125 m water sample from station 6 960 884 - Arg CCT [ENA] ¢þ
>W1511681137 LFIJ01000001 Gammaproteobacteria Gilvimarinus polysaccharolyticus YN3 [LFIJ] 1204221 1204297 + Arg CCT [ENA] ¡û
>W1610655078 LJNJ01000369 Gammaproteobacteria Gammaproteobacteria bacterium SG8_11 [LJNJ] 902 826 - Arg CCT [ENA] ¡û
>W1610662620 LJTU01000020 Acidithiobacillia Acidithiobacillales bacterium SG8_45 [LJTU] 2351 2275 - Arg CCT [ENA] ¡û
Identical group No.209782 (9 seq.)
>W1711190255 LWRY01000053 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 12492 12416 - Arg CCT [ENA] ¡û
>W1711190330 LWRZ01000029 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 23188 23264 + Arg CCT [ENA] ¡û
>W1711190434 LWSA01000143 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 4750 4674 - Arg CCT [ENA] ¡û
>W1711190562 LWSB01000182 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 4782 4706 - Arg CCT [ENA] ¡û
>W1711190610 LWSC01000048 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 10919 10843 - Arg CCT [ENA] ¡û
>W1711190671 LWSD01000032 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 19003 19079 + Arg CCT [ENA] ¡û
>W1711293196 LZYI01000116 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 4768 4692 - Arg CCT [ENA] ¡û
>W141206819 AZMO01000080 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 4679 4603 - Arg CCT [ENA] ¡û
>W1710743672 LGYM01000007 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 25727 25803 + Arg CCT [ENA] ¡û
Identical group No.254253 (2 seq.)
>W10127974 AEFB01000308 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 948 872 - Arg CCT [ENA] ¡û
>W11135519 AEFB01000308 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 948 872 - Arg CCT [ENA] ¡û
Identical group No.285302 (10 seq.)
>W1711220215 LXQG01000170 Acidithiobacillia Acidithiobacillus caldus [LXQG] 2400 2325 - Arg CCT [ENA] ¡û
>W1711292973 LZYE01000233 Acidithiobacillia Acidithiobacillus caldus [LZYE] 8523 8448 - Arg CCT [ENA] ¡û
>W1711292994 LZYF01000024 Acidithiobacillia Acidithiobacillus caldus [LZYF] 37457 37532 + Arg CCT [ENA] ¡û
>W1711293064 LZYG01000232 Acidithiobacillia Acidithiobacillus caldus [LZYG] 11832 11757 - Arg CCT [ENA] ¡û
>WENV181406448 OGCG01000282 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 25583 25508 - Arg CCT [ENA] ¢þ
>C181130840 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 423577 423502 - Arg CCT - ¡û
>W09134907 ACVD01000065 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 11345 11270 - Arg CCT [ENA] ¡û
>C151007978 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 526661 526586 - Arg CCT [Ensembl] ¡û
>C11100519 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 510783 510708 - Arg CCT [Ensembl] ¡û
>W1611004687 LXQG01000170 Acidithiobacillia Acidithiobacillus caldus [LXQG] 2400 2325 - Arg CCT [ENA] ¡û
Identical group No.289063 (28 seq.)
>W1711168338 LVXZ01000067 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 19656 19731 + Arg CCT [ENA] ¡û
>W1711169889 LVZL01000086 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 26877 26802 - Arg CCT [ENA] ¡û
>W1711190268 LWRY01000146 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 6523 6598 + Arg CCT [ENA] ¡û
>W1711190387 LWRZ01000329 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 6522 6597 + Arg CCT [ENA] ¡û
>W1711190411 LWSA01000139 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 6522 6597 + Arg CCT [ENA] ¡û
>W1711190567 LWSB01000245 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 6523 6598 + Arg CCT [ENA] ¡û
>W1711190582 LWSC01000016 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 1792 1717 - Arg CCT [ENA] ¡û
>W1711190739 LWSD01000347 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 1982 2057 + Arg CCT [ENA] ¡û
>W1711293197 LZYI01000129 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 8102 8027 - Arg CCT [ENA] ¡û
>W1711585840 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 593406 593331 - Arg CCT [ENA] ¡û
>W141206781 AZMO01000031 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 16864 16939 + Arg CCT [ENA] ¡û
>W141262938 CCCS020000038 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 31810 31735 - Arg CCT [ENA] ¡û
>C08000436 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 696432 696360 - Arg CCT [Ensembl] ¡û
>WENV170008359 AOMP01000276 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 4318 4243 - Arg CCT [ENA] ¢þ
>WENV170008445 AOMP01006547 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 66 141 + Arg CCT [ENA] ¢þ
>WENV170008536 AOMQ01002336 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 1220 1295 + Arg CCT [ENA] ¢þ
>C191005125 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 1753894 1753819 - Arg CCT - ¡û
>W141695552 JMEB01000100 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 2782 2707 - Arg CCT [ENA] ¡û
>C09100414 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 519469 519394 - Arg CCT [Ensembl] ¡û
>W1910831825 MXAV01000007 Acidithiobacillia Acidithiobacillus marinus SH [MXAV] 53846 53771 - Arg CCT [ENA] ¡û
>W1810257140 PQJK01000008 Acidithiobacillia Acidithiobacillus ferridurans IO-2C [PQJK] 37746 37671 - Arg CCT [ENA] ¡û
>W10127979 AEFB01000615 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 371 296 - Arg CCT [ENA] ¡û
>C11100757 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 998471 998396 - Arg CCT [Ensembl] ¡û
>W11135524 AEFB01000615 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 371 296 - Arg CCT [ENA] ¡û
>W11164296 AFJD01000022 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 19315 19390 + Arg CCT [ENA] ¡û
>W11168550 AFOH01000124 Acidithiobacillia Acidithiobacillus thiooxidans ATCC 19377 [AFOH] 12105 12030 - Arg CCT [ENA] ¡û
>W1610978253 LVXZ01000067 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 19656 19731 + Arg CCT [ENA] ¡û
>W1710743680 LGYM01000020 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 406941 407016 + Arg CCT [ENA] ¡û
Identical group No.307328 (14 seq.)
>W1710777652 LJBT01000048 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 974 1049 + Arg CCT [ENA] ¡û
>W1711010464 LQRJ01000024 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 19918 19993 + Arg CCT [ENA] ¡û
>W131215849 ATVI01000005 Gammaproteobacteria Nevskia ramosa DSM 11499 [ATVI] 436225 436152 - Arg CCT [ENA] ¡û
>W1711312150 MASQ01000046 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 29910 29985 + Arg CCT [ENA] ¡û
>WENV181227729 OFDN01035630 [OFDN] hot springs metagenome; Water 985 1057 + Arg CCT [ENA] ¢þ
>WENV181295294 OFHI01013938 [OFHI] soil metagenome; Clay 670 595 - Arg CCT [ENA] ¢þ
>WENV181296152 OFHJ01010696 [OFHJ] soil metagenome; Clay 184 109 - Arg CCT [ENA] ¢þ
>W141776800 JOMH01000001 Gammaproteobacteria Polycyclovorans algicola TG408 [JOMH] 3307320 3307395 + Arg CCT [ENA] ¡û
>W1810679267 QKQP01000001 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 935930 936005 + Arg CCT [ENA] ¡û
>W1610627922 LIEB01000054 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 999 924 - Arg CCT [ENA] ¡û
>W1610641838 LJBT01000048 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 974 1049 + Arg CCT [ENA] ¡û
>W1610858984 LQRJ01000024 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 19918 19993 + Arg CCT [ENA] ¡û
>W1611057351 MASQ01000046 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 29910 29985 + Arg CCT [ENA] ¡û
>W1710759049 LIEB01000054 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 999 924 - Arg CCT [ENA] ¡û
Identical group No.318006 (8 seq.)
>W1710799199 LJUK01000183 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 4803 4728 - Arg CCT [ENA] ¡û
>W1711403026 MFSP01000196 Unclassified Candidatus Muproteobacteria bacterium RBG_16_60_9 [MFSP] 13473 13548 + Arg CCT [ENA] ¡û
>W1711403135 MFSU01000048 Unclassified Candidatus Muproteobacteria bacterium RBG_16_65_34 [MFSU] 19378 19303 - Arg CCT [ENA] ¡û
>WENV180269110 OBEQ012033987 [OBEQ] groundwater metagenome; groundwater 783 708 - Arg CCT [ENA] ¢þ
>WENV180295679 OBIZ01225868 [OBIZ] soil metagenome; soil 31 106 + Arg CCT [ENA] ¢þ
>WENV180350635 OBLQ010005004 [OBLQ] soil metagenome; soil 4621 4546 - Arg CCT [ENA] ¢þ
>WENV183678023 ORJL011827077 [ORJL] groundwater metagenome; groundwater 951 876 - Arg CCT [ENA] ¢þ
>W1610663156 LJUK01000183 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 4803 4728 - Arg CCT [ENA] ¡û
Identical group No.385994 (2 seq.)
>W131231768 AUIS01000004 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 12976 12901 - Arg CCT [ENA] ¡û
>WENV170652886 JRYH01076585 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 87 12 - Arg CCT [ENA] ¢þ
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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