tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = CCA

HIT: 4 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.455995 (55 seq.)
>W1710889749	LNBC01000015	Alphaproteobacteria	Paracoccus aminovorans [LNBC]	73397	73472	+	Trp	CCA	[ENA]	○
>W1711135067	LUYN01000014	Alphaproteobacteria	Rhodobacterales bacterium Alpha_01 [LUYN]	19685	19610	-	Trp	CCA	[ENA]	○
>W1712104769	NIPZ01000088	Alphaproteobacteria	Paracoccus yeei [NIPZ]	59888	59963	+	Trp	CCA	[ENA]	○
>C171067783	CP017781	Alphaproteobacteria	Rhodobacter sp. LPB0142 [CP017781]	2855884	2855809	-	Trp	CCA	-	○
>C171107687	CP020442	Alphaproteobacteria	Paracoccus yeei FDAARGOS_252 [CP020442]	1155238	1155163	-	Trp	CCA	-	○
>W131158894	AQUO01000001	Alphaproteobacteria	Paracoccus sp. N5 [AQUO]	1883049	1883124	+	Trp	CCA	[ENA]	○
>C016009	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 [CP000489, CP000490]	722941	723016	+	Trp	CCA	[Ensembl]	○
>WENV183733614	PJTY01006705	[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment		1277	1202	-	Trp	CCA	[ENA]	◯
>WENV170228404	CEQG01008240	[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		6475	6400	-	Trp	CCA	[ENA]	◯
>WENV170564875	CZPY01000015	[CZPY] metagenome; PAHs-polluted Soil		73397	73472	+	Trp	CCA	[ENA]	◯
>WENV170606714	FUWD010716671	[FUWD] metagenome; unknown		26	101	+	Trp	CCA	[ENA]	◯
>PL191000038	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)	722941	723016	+	Trp	CCA	[Ensembl]	○
>W09103075	AAIT01000032	Alphaproteobacteria	Paracoccus denitrificans PD1222 [AAIT]	7114	7039	-	Trp	CCA	[ENA]	○
>C181099803	CP024422	Alphaproteobacteria	Paracoccus yeei TT13 [CP024422]	669466	669391	-	Trp	CCA	-	○
>C181116766	CP025408	Alphaproteobacteria	Paracoccus tegillarcae BM15 [CP025408]	2056908	2056983	+	Trp	CCA	-	○
>C181190848	CP030239	Alphaproteobacteria	Paracoccus mutanolyticus RSP-02 [CP030239]	1147447	1147372	-	Trp	CCA	-	○
>C181203387	LN832559	Alphaproteobacteria	Paracoccus aminovorans [LN832559]	585601	585676	+	Trp	CCA	-	○
>C191073591	CP031078	Alphaproteobacteria	Paracoccus yeei CCUG 32053 [CP031078]	2690502	2690427	-	Trp	CCA	-	○
>C191134380	CP035090	Alphaproteobacteria	Paracoccus denitrificans ATCC 19367 [CP035090, CP035091]	2317340	2317415	+	Trp	CCA	-	○
>W141558868	JHWH01000007	Alphaproteobacteria	Paracoccus yeei ATCC BAA-599 [JHWH]	152279	152204	-	Trp	CCA	[ENA]	○
>W1910547050	FZNM01000001	Alphaproteobacteria	Paracoccus sediminis DSM 26170 [FZNM]	168542	168617	+	Trp	CCA	[ENA]	○
>W1911397930	NWMQ01000038	Alphaproteobacteria	Paracoccus sp. SY [NWMQ]	6952	7027	+	Trp	CCA	[ENA]	○
>W1810235967	PPGA01000002	Alphaproteobacteria	Paracoccus denitrificans ISTOD1 [PPGA]	292942	293017	+	Trp	CCA	[ENA]	○
>W1810445012	PZKF01000047	Alphaproteobacteria	Phaeovulum veldkampii DSM 11550 [PZKF]	16862	16787	-	Trp	CCA	[ENA]	○
>W1810543584	QDKM01000002	Alphaproteobacteria	Pararhodobacter oceanensis AM505 [QDKM]	57579	57654	+	Trp	CCA	[ENA]	○
>W1810585300	QFCQ01000001	Alphaproteobacteria	Paracoccus thiocyanatus SST [QFCQ]	3729	3804	+	Trp	CCA	[ENA]	○
>W1810685685	QKZL01000028	Alphaproteobacteria	Palleronia aestuarii DSM 22009 [QKZL]	1318	1243	-	Trp	CCA	[ENA]	○
>W1810721653	QNSD01000034	Alphaproteobacteria	Rhodobacter sp. 140A [QNSD]	7298	7373	+	Trp	CCA	[ENA]	○
>W1810759466	QPJL01000002	Alphaproteobacteria	Paracoccus lutimaris CECT 8525 [QPJL]	21140	21065	-	Trp	CCA	[ENA]	○
>W1810762330	QPML01000059	Alphaproteobacteria	Paracoccus versutus MAL 1HM19 [QPML]	4732	4807	+	Trp	CCA	[ENA]	○
>W1810862251	QTUJ01000002	Alphaproteobacteria	Paracoccus versutus DSM 17099 [QTUJ]	587331	587406	+	Trp	CCA	[ENA]	○
>W1810884875	QUMX01000056	Alphaproteobacteria	Paracoccus versutus DSM 582 [QUMX]	5330	5405	+	Trp	CCA	[ENA]	○
>C11117048	CP002897	Alphaproteobacteria	Paracoccus denitrificans [CP002897]	2919112	2919037	-	Trp	CCA	[Ensembl]	○
>W1511325042	JQFU01000066	Alphaproteobacteria	Rhodovulum sp. NI22 [JQFU]	806	881	+	Trp	CCA	[ENA]	○
>W1511348608	JRKO01000019	Alphaproteobacteria	Paracoccus versutus DSM 582 [JRKO]	4792	4867	+	Trp	CCA	[ENA]	○
>W1511348666	JRKP01000086	Alphaproteobacteria	Paracoccus sanguinis 39524 [JRKP]	1070	995	-	Trp	CCA	[ENA]	○
>W1511348680	JRKQ01000010	Alphaproteobacteria	Paracoccus sanguinis 5503 [JRKQ]	41159	41084	-	Trp	CCA	[ENA]	○
>W1511348755	JRKR01000126	Alphaproteobacteria	Paracoccus sanguinis 10990 [JRKR]	1022	947	-	Trp	CCA	[ENA]	○
>W1511348782	JRKS01000009	Alphaproteobacteria	Paracoccus sphaerophysae HAMBI 3106 [JRKS]	53977	53902	-	Trp	CCA	[ENA]	○
>W1511348819	JRKT01000013	Alphaproteobacteria	Paracoccus sanguinis 4681 [JRKT]	41044	40969	-	Trp	CCA	[ENA]	○
>C161029307	CP010869	Alphaproteobacteria	Actibacterium sp. EMB200-NS6 [CP010869]	378275	378350	+	Trp	CCA	[Ensembl]	○
>W121060012	AJFB01001406	Alphaproteobacteria	Paracoccus denitrificans SD1 [AJFB]	228	153	-	Trp	CCA	[ENA]	○
>W1610049849	BBFH01000895	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	711	636	-	Trp	CCA	[ENA]	○
>W1610081509	BDDO01000043	Alphaproteobacteria	Paenirhodobacter sp. MME-103 [BDDO]	152	227	+	Trp	CCA	[ENA]	○
>W1610750127	LNBC01000015	Alphaproteobacteria	Paracoccus aminovorans [LNBC]	73397	73472	+	Trp	CCA	[ENA]	○
>W1610946187	LUYN01000014	Alphaproteobacteria	Rhodobacterales bacterium Alpha_01 [LUYN]	19685	19610	-	Trp	CCA	[ENA]	○
>W1710046248	BBFH01000895	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	711	636	-	Trp	CCA	[ENA]	○
>W1710080160	BDDO01000043	Alphaproteobacteria	Paenirhodobacter sp. MME-103 [BDDO]	152	227	+	Trp	CCA	[ENA]	○
>W1710518481	FNEA01000046	Alphaproteobacteria	Paracoccus denitrificans [FNEA]	19526	19451	-	Trp	CCA	[ENA]	○
>W1710528233	FNNA01000012	Alphaproteobacteria	Paracoccus sanguinis [FNNA]	8750	8825	+	Trp	CCA	[ENA]	○
>W1710547690	FODE01000015	Alphaproteobacteria	Paracoccus alcaliphilus [FODE]	70812	70737	-	Trp	CCA	[ENA]	○
>W1710563607	FOPU01000052	Alphaproteobacteria	Paracoccus aminovorans [FOPU]	4924	4999	+	Trp	CCA	[ENA]	○
>W1710574702	FOYK01000046	Alphaproteobacteria	Paracoccus denitrificans [FOYK]	4747	4822	+	Trp	CCA	[ENA]	○
>W1710581786	FPKI01000065	Alphaproteobacteria	Paracoccus pantotrophus [FPKI]	19246	19171	-	Trp	CCA	[ENA]	○
>W1710596209	FTMK01000035	Alphaproteobacteria	Paracoccus thiocyanatus [FTMK]	19755	19680	-	Trp	CCA	[ENA]	○
Identical group No.463568 (55 seq.)
>W1710991257	LPXN01000158	Alphaproteobacteria	Oceanibaculum pacificum [LPXN]	211	286	+	Trp	CCA	[ENA]	○
>W1711628171	MPOB01000020	Alphaproteobacteria	Oceanibaculum nanhaiense L54-1-50 [MPOB]	251	326	+	Trp	CCA	[ENA]	○
>PL171000683	CP007795	Alphaproteobacteria	Azospirillum brasilense Az39 plasmid:AbAZ39_p2	52393	52318	-	Trp	CCA	[ENA]	○
>PL171000938	CP012916	Alphaproteobacteria	Azospirillum brasilense Sp 7 plasmid:ABSP7_p2	806485	806410	-	Trp	CCA	[ENA]	○
>PL171001770	HE577329	Alphaproteobacteria	Azospirillum brasilense Sp245 sp245 plasmid:AZOBR_p2	272620	272695	+	Trp	CCA	[ENA]	○
>W131045458	AMRL01000043	Alphaproteobacteria	Oceanibaculum indicum P24 [AMRL]	15508	15433	-	Trp	CCA	[ENA]	○
>W131109473	APHV01000270	Alphaproteobacteria	Azospirillum brasilense FP2 [APHV]	15479	15554	+	Trp	CCA	[ENA]	○
>W131223677	AUCG01000003	Alphaproteobacteria	Niveispirillum irakense DSM 11586 [AUCG]	111227	111302	+	Trp	CCA	[ENA]	○
>WENV180282727	OBIC01002574	[OBIC] beach sand metagenome; beach sand		2512	2437	-	Trp	CCA	[ENA]	◯
>WENV180309517	OBJS01004202	[OBJS] beach sand metagenome; beach sand		706	631	-	Trp	CCA	[ENA]	◯
>WENV180368276	OBOF01048912	[OBOF] marine metagenome; ENVO:00002010		135	210	+	Trp	CCA	[ENA]	◯
>WENV180393562	OBPQ01080057	[OBPQ] marine metagenome; polypropylene bottle		315	240	-	Trp	CCA	[ENA]	◯
>WENV180588455	OCOP01061594	[OCOP] marine metagenome; water		398	470	+	Trp	CCA	[ENA]	◯
>WENV180595195	OCPB01041848	[OCPB] marine metagenome; ENVO:00002149		394	319	-	Trp	CCA	[ENA]	◯
>WENV181192774	OEPS011023594	[OEPS] soil metagenome; soil		206	131	-	Trp	CCA	[ENA]	◯
>W141223561	BADK01000106	Alphaproteobacteria	Azospirillum sp. B506 [BADK]	28	103	+	Trp	CCA	[ENA]	○
>WENV183725900	PJQF01033406	[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm		362	437	+	Trp	CCA	[ENA]	◯
>WENV183735044	PJUA01000556	[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment		314	389	+	Trp	CCA	[ENA]	◯
>WENV183736387	PJUC01001698	[PJUC] soil metagenome; Soil enriched on filter paper		3865	3790	-	Trp	CCA	[ENA]	◯
>WENV170680890	LFEF01030955	[LFEF] freshwater metagenome; waterbloom		2840	2765	-	Trp	CCA	[ENA]	◯
>WENV170771809	LXNI01004385	[LXNI] sponge metagenome; marine sponge reef		290	365	+	Trp	CCA	[ENA]	◯
>WENV170774637	LXNJ01051894	[LXNJ] sponge metagenome; marine sponge reef		266	341	+	Trp	CCA	[ENA]	◯
>WENV170902406	MDTD01184821	[MDTD] marine metagenome; seawater		5436	5361	-	Trp	CCA	[ENA]	◯
>WENV170959360	MKWU01004495	[MKWU] sponge metagenome;		16129	16054	-	Trp	CCA	[ENA]	◯
>PL191000275	CP022363	Alphaproteobacteria	Azospirillum sp. TSH58 plasmid:TSH58_p03 (CP022363)	613601	613526	-	Trp	CCA	[ENA]	○
>PL191000967	CP032323	Alphaproteobacteria	Azospirillum brasilense MTCC4035 plasmid:p2 (CP032323)	112298	112373	+	Trp	CCA	[ENA]	○
>PL191001009	CP032341	Alphaproteobacteria	Azospirillum brasilense MTCC4038 plasmid:p2 (CP032341)	242156	242231	+	Trp	CCA	[ENA]	○
>PL191001061	CP032347	Alphaproteobacteria	Azospirillum brasilense MTCC4039 plasmid:p2 (CP032347)	78789	78714	-	Trp	CCA	[ENA]	○
>C181177424	CP029353	Alphaproteobacteria	Azospirillum thermophilum CFH 70021 [CP029352, CP029353, CP029354, CP029355]	902703	902778	+	Trp	CCA	-	○
>C181185924	CP029829	Alphaproteobacteria	Azospirillum ramasamyi M2T2B2 [CP029829]	337094	337169	+	Trp	CCA	-	○
>W141520297	JGVN01000003	Alphaproteobacteria	Azospirillum argentinense brasilense [JGVN]	625433	625358	-	Trp	CCA	[ENA]	○
>C191170695	CP039634	Alphaproteobacteria	Azospirillum sp. TSH100 [CP039634, CP039635, CP039636, CP039637, CP039638, CP039639]	1425255	1425330	+	Trp	CCA	-	○
>C191170812	CP039650	Alphaproteobacteria	Azospirillum sp. TSA2s TSA2S [CP039642, CP039645, CP039646, CP039647, CP039648, CP039649, CP039650]	1731487	1731562	+	Trp	CCA	-	○
>W1910545514	FZLR01000013	Alphaproteobacteria	Rhodospirillaceae bacterium Spongia-Bin9 [FZLR]	217	292	+	Trp	CCA	[ENA]	○
>W1910548170	FZOI01000003	Alphaproteobacteria	Azospirillum sp. RU38E [FZOI]	272440	272365	-	Trp	CCA	[ENA]	○
>W1910548552	FZOP01000003	Alphaproteobacteria	Azospirillum sp. RU37A [FZOP]	272440	272365	-	Trp	CCA	[ENA]	○
>W1910612957	LGQT01000160	Alphaproteobacteria	Azospirillum sp. TSH7 [LGQT]	273	348	+	Trp	CCA	[ENA]	○
>W1910613021	LGQU01000169	Alphaproteobacteria	Azospirillum sp. TSH20 [LGQU]	279	354	+	Trp	CCA	[ENA]	○
>W1910613034	LGQV01000022	Alphaproteobacteria	Azospirillum sp. TSH58 [LGQV]	16072	16147	+	Trp	CCA	[ENA]	○
>W1910613203	LGQX01000100	Alphaproteobacteria	Azospirillum sp. TSH100 [LGQX]	271	346	+	Trp	CCA	[ENA]	○
>W1910613302	LGQZ01000131	Alphaproteobacteria	Azospirillum sp. TSO22-1 [LGQZ]	16289	16214	-	Trp	CCA	[ENA]	○
>W1910613415	LGRK01000056	Alphaproteobacteria	Azospirillum sp. Sp 7 [LGRK]	140254	140179	-	Trp	CCA	[ENA]	○
>W1911138098	NOWT01000010	Alphaproteobacteria	Azospirillum brasilense 2A1 [NOWT]	27252	27327	+	Trp	CCA	[ENA]	○
>W1911768752	QXHE01000005	Alphaproteobacteria	Azospirillum brasilense SR80 [QXHE]	35958	35883	-	Trp	CCA	[ENA]	○
>W1810222236	POQV01000003	Alphaproteobacteria	Azospirillum brasilense Ab-V5 [POQV]	148328	148403	+	Trp	CCA	[ENA]	○
>W1810223542	POTD01000007	Alphaproteobacteria	Azospirillum brasilense Ab-V6 [POTD]	148115	148190	+	Trp	CCA	[ENA]	○
>W1810226097	POWG01000019	Alphaproteobacteria	Azospirillum argentinense REC3 [POWG]	75415	75340	-	Trp	CCA	[ENA]	○
>W1810692550	QLKQ01000003	Alphaproteobacteria	Azospirillum brasilense HAMBI_3172 [QLKQ]	114736	114811	+	Trp	CCA	[ENA]	○
>C10101250	AP010946	Alphaproteobacteria	Azospirillum sp. B510 [AP010946]	648712	648787	+	Trp	CCA	[Ensembl]	○
>C121016576	FQ311868	Alphaproteobacteria	Azospirillum lipoferum 4B [FQ311868]	418092	418167	+	Trp	CCA	[Ensembl]	○
>C161085677	CP015285	Alphaproteobacteria	Azospirillum humicireducens SgZ-5 [CP015285]	395844	395919	+	Trp	CCA	[Ensembl]	○
>W1610845929	LPXN01000158	Alphaproteobacteria	Oceanibaculum pacificum [LPXN]	211	286	+	Trp	CCA	[ENA]	○
>W1710607918	FXAK01000007	Alphaproteobacteria	Azospirillum oryzae [FXAK]	635265	635340	+	Trp	CCA	[ENA]	○
>W1710626710	JPIR01000065	Alphaproteobacteria	Azospirillum brasilense [JPIR]	28924	28849	-	Trp	CCA	[ENA]	○
>W1710626799	JPIS01000150	Alphaproteobacteria	Azospirillum brasilense [JPIS]	1537	1612	+	Trp	CCA	[ENA]	○
Identical group No.551762 (1 seq.)
>PL171001253	CP016463	Alphaproteobacteria	Bosea sp. RAC05 plasmid:pBSY19_1	478462	478537	+	Trp	CCA	[ENA]	○
Identical group No.585817 (4 seq.)
>PL191001406	CP039965	Alphaproteobacteria	Pseudorhodobacter sp. S12M18 plasmid:unnamed1 (CP039965)	579751	579676	-	Trp	CCA	[ENA]	○
>W1910574853	JQHS01000004	Alphaproteobacteria	Falsirhodobacter deserti W402 [JQHS]	980291	980216	-	Trp	CCA	[ENA]	○
>W1511698373	LGHS01000061	Alphaproteobacteria	Pseudorhodobacter aquimaris KCTC 23043 [LGHS]	60915	60840	-	Trp	CCA	[ENA]	○
>W1710593901	FSQW01000001	Alphaproteobacteria	Parasphingorhabdus marina DSM 22363 [FSQW]	1039640	1039565	-	Trp	CCA	[ENA]	○