tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = CAT

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.88724 (7 seq.)
>WENV180212315 OBAN01006119 [OBAN] marine metagenome; ENVO 00002150 283 367 + Ile2 CAT [ENA] ¢þ
>WENV180370125 OBOH01033070 [OBOH] marine metagenome; ENVO:00002010 393 309 - Ile2 CAT [ENA] ¢þ
>WENV180594057 OCOY01021981 [OCOY] marine metagenome; ENVO:00002010 259 175 - Ile2 CAT [ENA] ¢þ
>CHL1810002573 GU323224 Stramenopiles Thalassiosira oceanica CCMP1005 (GU323224) 62624 62708 + Met CAT [ENA] ¡û
>CHL1810002661 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 32505 32591 + Met CAT [ENA] ¡û
>CHL1810008344 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 30564 30478 - Met CAT [ENA] ¡û
>CHL090102726 EF067920 stramenopiles Phaeodactylum tricornutum 30471 30557 + Met CAT [ENA] ¡û
Identical group No.90110 (10 seq.)
>WENV180210282 OBAL01182705 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 37 123 + Ile2 CAT [ENA] ¢þ
>WENV180309971 OBJS01113127 [OBJS] beach sand metagenome; beach sand 94 180 + Ile2 CAT [ENA] ¢þ
>WENV181322464 OFKR01014426 [OFKR] marine metagenome; sea ice 217 303 + Ile2 CAT [ENA] ¢þ
>WENV181322779 OFKU01017104 [OFKU] marine metagenome; sea ice 134 220 + Ile2 CAT [ENA] ¢þ
>WENV183621453 OOFU01001318 [OOFU] marine metagenome; sea ice 298 212 - Ile2 CAT [ENA] ¢þ
>WENV183623497 OOGA01005079 [OOGA] marine metagenome; sea ice 242 156 - Ile2 CAT [ENA] ¢þ
>WENV183625611 OOGG01003621 [OOGG] marine metagenome; sea ice 574 660 + Ile2 CAT [ENA] ¢þ
>CHL1810002634 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 29915 30001 + Met CAT [ENA] ¡û
>CHL1810010623 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 40857 40943 + Met CAT [ENA] ¡û
>CHL1810013697 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 5889 5803 - Met CAT [ENA] ¡û
Identical group No.117618 (1 seq.)
>CHL1810003206 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 58213 58130 - Met CAT [ENA] ¡û
Identical group No.234499 (1 seq.)
>CHL090101377 AY217738 Alveolata Eimeria tenella 6230 6308 + Met CAT [ENA] ¡û
Identical group No.235590 (2 seq.)
>CHL1810003186 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 62057 62132 + Met CAT [ENA] ¡û
>CHL1810003196 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 81700 81625 - Met CAT [ENA] ¡û
Identical group No.239900 (1 seq.)
>CHL090103191 U87145 Alveolata Toxoplasma gondii 6385 6462 + Met CAT [ENA] ¡û
Identical group No.253184 (2 seq.)
>CHL090101372 AY217738 Alveolata Eimeria tenella 2378 2454 + Met CAT [ENA] ¡û
>CHL090101391 AY217738 Alveolata Eimeria tenella 32344 32268 - Met CAT [ENA] ¡û
Identical group No.288600 (60 seq.)
>WENV180038603 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 41875 41800 - fMet CAT [ENA] ¢þ
>WENV180103689 OAPB01000224 [OAPB] marine metagenome; Sterile flask 1971 1896 - fMet CAT [ENA] ¢þ
>WENV180114885 OAPS01062749 [OAPS] marine metagenome; sea water 142 69 - fMet CAT [ENA] ¢þ
>WENV180294507 OBIY01200284 [OBIY] beach sand metagenome; beach sand 167 92 - fMet CAT [ENA] ¢þ
>WENV180310115 OBJS01231205 [OBJS] beach sand metagenome; beach sand 102 177 + fMet CAT [ENA] ¢þ
>WENV180365423 OBOB01130896 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 265 338 + fMet CAT [ENA] ¢þ
>WENV180388849 OBPI01000461 [OBPI] marine metagenome; Sterile flask 2606 2681 + fMet CAT [ENA] ¢þ
>WENV180589539 OCOS01000008 [OCOS] marine metagenome; Sterile flask 5082 5007 - fMet CAT [ENA] ¢þ
>WENV181304801 OFIC01004629 [OFIC] marine metagenome; sea ice 454 527 + fMet CAT [ENA] ¢þ
>WENV181304926 OFIE01000371 [OFIE] marine metagenome; sea ice 402 477 + fMet CAT [ENA] ¢þ
>WENV181316049 OFJS01000176 [OFJS] marine metagenome; sea ice 1955 1880 - fMet CAT [ENA] ¢þ
>WENV181321603 OFKM01021318 [OFKM] marine metagenome; sea ice 516 441 - fMet CAT [ENA] ¢þ
>WENV181322016 OFKP01000364 [OFKP] marine metagenome; sea ice 735 810 + fMet CAT [ENA] ¢þ
>WENV181322403 OFKR01002552 [OFKR] marine metagenome; sea ice 476 549 + fMet CAT [ENA] ¢þ
>WENV181322635 OFKT01007692 [OFKT] marine metagenome; sea ice 326 401 + fMet CAT [ENA] ¢þ
>WENV181322713 OFKU01000415 [OFKU] marine metagenome; sea ice 670 743 + fMet CAT [ENA] ¢þ
>WENV181322831 OFKV01000320 [OFKV] marine metagenome; sea ice 1954 2027 + fMet CAT [ENA] ¢þ
>WENV181323705 OFKZ01000198 [OFKZ] marine metagenome; sea ice 1775 1850 + fMet CAT [ENA] ¢þ
>WENV181324233 OFLD01000237 [OFLD] marine metagenome; sea ice 1158 1231 + fMet CAT [ENA] ¢þ
>WENV181324841 OFLH01016092 [OFLH] marine metagenome; sea ice 80 155 + fMet CAT [ENA] ¢þ
>WENV181415503 OGCL01012625 [OGCL] hot springs metagenome; Hot spring water 2564 2489 - fMet CAT [ENA] ¢þ
>WENV183615054 OOEA01043474 [OOEA] marine metagenome; sea ice 67 142 + fMet CAT [ENA] ¢þ
>WENV183615281 OOEB01000955 [OOEB] marine metagenome; sea ice 1064 989 - fMet CAT [ENA] ¢þ
>WENV183615922 OOEC01005498 [OOEC] marine metagenome; sea ice 510 583 + fMet CAT [ENA] ¢þ
>WENV183616740 OOEE01000119 [OOEE] marine metagenome; sea ice 9470 9397 - fMet CAT [ENA] ¢þ
>WENV183617483 OOEG01001227 [OOEG] marine metagenome; sea ice 2732 2659 - fMet CAT [ENA] ¢þ
>WENV183621443 OOFU01000905 [OOFU] marine metagenome; sea ice 2919 2992 + fMet CAT [ENA] ¢þ
>WENV183622596 OOFW01000003 [OOFW] marine metagenome; sea ice 2987 2914 - fMet CAT [ENA] ¢þ
>WENV183622973 OOFX01000163 [OOFX] marine metagenome; sea ice 1796 1723 - fMet CAT [ENA] ¢þ
>WENV183624358 OOGD01002514 [OOGD] marine metagenome; sea ice 1990 1917 - fMet CAT [ENA] ¢þ
>WENV183624549 OOGD01037623 [OOGD] marine metagenome; sea ice 575 648 + fMet CAT [ENA] ¢þ
>WENV183624688 OOGE01000895 [OOGE] marine metagenome; sea ice 550 477 - fMet CAT [ENA] ¢þ
>WENV183625583 OOGG01001621 [OOGG] marine metagenome; sea ice 144 219 + fMet CAT [ENA] ¢þ
>WENV183627422 OOGL01003590 [OOGL] marine metagenome; sea ice 2118 2043 - fMet CAT [ENA] ¢þ
>WENV183627974 OOGM01000148 [OOGM] marine metagenome; sea ice 1780 1853 + fMet CAT [ENA] ¢þ
>WENV183628590 OOGO01002524 [OOGO] marine metagenome; sea ice 1868 1941 + fMet CAT [ENA] ¢þ
>WENV170025008 BCQL01180649 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 211 286 + Met CAT [ENA] ¢þ
>WENV170274433 CERM01017452 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1128 1055 - Met CAT [ENA] ¢þ
>WENV170516064 CEWB01078953 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 240 313 + Met CAT [ENA] ¢þ
>WENV170639212 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 31174 31099 - Met CAT [ENA] ¢þ
>WENV170805707 MDSW01069367 [MDSW] marine metagenome; seawater 10312 10385 + Met CAT [ENA] ¢þ
>WENV170806995 MDSW01090924 [MDSW] marine metagenome; seawater 7111 7184 + Met CAT [ENA] ¢þ
>WENV170817004 MDSX01041960 [MDSX] marine metagenome; seawater 1598 1671 + Met CAT [ENA] ¢þ
>WENV170847223 MDTA01056597 [MDTA] marine metagenome; seawater 3342 3415 + Met CAT [ENA] ¢þ
>CHL1810002649 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 24519 24443 - Met CAT [ENA] ¡û
>CHL1810002675 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 27112 27037 - Met CAT [ENA] ¡û
>CHL1810005296 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 22276 22349 + Met CAT [ENA] ¡û
>CHL1810008325 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 36929 37002 + Met CAT [ENA] ¡û
>CHL1810008370 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 24905 24830 - Met CAT [ENA] ¡û
>CHL1810010641 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 35412 35337 - Met CAT [ENA] ¡û
>CHL1810013668 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 13662 13587 - Met CAT [ENA] ¡û
>CHL1810034272 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 63043 63116 + Met CAT [ENA] ¡û
>CHL1810034279 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 136884 136811 - Met CAT [ENA] ¡û
>CHL1810059316 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 66918 66845 - Met CAT [ENA] ¡û
>CHL1810059426 MG755800 Stramenopiles Entomoneis sp. (MG755800) 24779 24704 - Met CAT [ENA] ¡û
>CHL1810059450 MG755801 Stramenopiles Triceratium dubium (MG755801) 57149 57076 - Met CAT [ENA] ¡û
>CHL1810059487 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 13821 13748 - Met CAT [ENA] ¡û
>CHL090102742 EF067920 stramenopiles Phaeodactylum tricornutum 24860 24785 - Met CAT [ENA] ¡û
>CHL090103358 Z67753 stramenopiles Odontella sinensis 62586 62659 + Met CAT [ENA] ¡û
>ENV09000193 ABSN01026862 Freshwater sediment metagenome lwFormaldehyde_C1 528 603 + Met CAT [ENA] ¡û
Identical group No.297391 (1 seq.)
>CHL1810003208 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 56016 55942 - Met CAT [ENA] ¡û
Identical group No.430610 (2 seq.)
>CHL090103189 U87145 Alveolata Toxoplasma gondii 2379 2454 + Met CAT [ENA] ¡û
>CHL090103204 U87145 Alveolata Toxoplasma gondii 32618 32543 - Met CAT [ENA] ¡û
Identical group No.639041 (1 seq.)
>CHL1810046783 LC008447 Alveolata Lepidodinium chlorophorum (LC008447) 63856 63784 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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