tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = CCA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.459397 (75 seq.)
>WENV180103707 OAPB01000563 [OAPB] marine metagenome; Sterile flask 268 342 + Trp CCA [ENA] ¢þ
>WENV180104455 OAPC01009773 [OAPC] marine metagenome; na 804 731 - Trp CCA [ENA] ¢þ
>WENV180210190 OBAL01148157 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 277 205 - Trp CCA [ENA] ¢þ
>WENV180310266 OBJS01390277 [OBJS] beach sand metagenome; beach sand 44 116 + Trp CCA [ENA] ¢þ
>WENV180356652 OBNL01004284 [OBNL] marine metagenome; ENVO:00002010 427 499 + Trp CCA [ENA] ¢þ
>WENV180358795 OBNQ01017002 [OBNQ] marine metagenome; ENVO 00002150 195 268 + Trp CCA [ENA] ¢þ
>WENV180365065 OBOB01006718 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 274 346 + Trp CCA [ENA] ¢þ
>WENV180374566 OBOK01000303 [OBOK] marine metagenome; seawater 3127 3055 - Trp CCA [ENA] ¢þ
>WENV180389942 OBPK01005511 [OBPK] marine metagenome; Sterile flask 1348 1276 - Trp CCA [ENA] ¢þ
>WENV180394727 OBPS01051159 [OBPS] marine metagenome; ENVO:00002010 seawater 364 290 - Trp CCA [ENA] ¢þ
>WENV180589528 OCOS01000001 [OCOS] marine metagenome; Sterile flask 2185 2113 - Trp CCA [ENA] ¢þ
>WENV180593917 OCOY01003520 [OCOY] marine metagenome; ENVO:00002010 1526 1599 + Trp CCA [ENA] ¢þ
>WENV181092579 OEBK01010607 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 352 280 - Trp CCA [ENA] ¢þ
>WENV181162582 OEIO01001508 [OEIO] marine metagenome; sea ice 2352 2278 - Trp CCA [ENA] ¢þ
>WENV181316113 OFJS01013922 [OFJS] marine metagenome; sea ice 496 422 - Trp CCA [ENA] ¢þ
>WENV181370284 OFQS01002196 [OFQS] freshwater metagenome; Freshwater Lake 431 505 + Trp CCA [ENA] ¢þ
>WENV181395883 OFSB01015519 [OFSB] freshwater metagenome; Freshwater Lake 213 287 + Trp CCA [ENA] ¢þ
>WENV183615168 OOEA01087878 [OOEA] marine metagenome; sea ice 381 307 - Trp CCA [ENA] ¢þ
>WENV183615271 OOEB01000512 [OOEB] marine metagenome; sea ice 646 572 - Trp CCA [ENA] ¢þ
>WENV183615912 OOEC01003652 [OOEC] marine metagenome; sea ice 525 451 - Trp CCA [ENA] ¢þ
>WENV183616833 OOEE01003388 [OOEE] marine metagenome; sea ice 73 147 + Trp CCA [ENA] ¢þ
>WENV183617516 OOEG01003812 [OOEG] marine metagenome; sea ice 1226 1152 - Trp CCA [ENA] ¢þ
>WENV183617995 OOFL01001065 [OOFL] marine metagenome; seawater 17 91 + Trp CCA [ENA] ¢þ
>WENV183620699 OOFS01015143 [OOFS] marine metagenome; sea ice 837 763 - Trp CCA [ENA] ¢þ
>WENV183621068 OOFT01004527 [OOFT] marine metagenome; sea ice 289 362 + Trp CCA [ENA] ¢þ
>WENV183621123 OOFT01007356 [OOFT] marine metagenome; sea ice 8 82 + Trp CCA [ENA] ¢þ
>WENV183621442 OOFU01000905 [OOFU] marine metagenome; sea ice 915 989 + Trp CCA [ENA] ¢þ
>WENV183621994 OOFV01002316 [OOFV] marine metagenome; seawater 1282 1354 + Trp CCA [ENA] ¢þ
>WENV183622595 OOFW01000003 [OOFW] marine metagenome; sea ice 4984 4910 - Trp CCA [ENA] ¢þ
>WENV183622972 OOFX01000163 [OOFX] marine metagenome; sea ice 3801 3727 - Trp CCA [ENA] ¢þ
>WENV183623355 OOFY01000083 [OOFY] marine metagenome; sea ice 1988 1914 - Trp CCA [ENA] ¢þ
>WENV183623447 OOGA01001502 [OOGA] marine metagenome; sea ice 649 723 + Trp CCA [ENA] ¢þ
>WENV183624364 OOGD01002885 [OOGD] marine metagenome; sea ice 861 935 + Trp CCA [ENA] ¢þ
>WENV183624581 OOGD01050013 [OOGD] marine metagenome; sea ice 314 240 - Trp CCA [ENA] ¢þ
>WENV183624687 OOGE01000895 [OOGE] marine metagenome; sea ice 2554 2480 - Trp CCA [ENA] ¢þ
>WENV183628066 OOGM01008637 [OOGM] marine metagenome; sea ice 334 260 - Trp CCA [ENA] ¢þ
>WENV183628222 OOGN01000067 [OOGN] marine metagenome; sea ice 5874 5800 - Trp CCA [ENA] ¢þ
>WENV183628658 OOGO01005703 [OOGO] marine metagenome; sea ice 1404 1330 - Trp CCA [ENA] ¢þ
>WENV183630783 OOGU01002307 [OOGU] marine metagenome; sea ice 1679 1753 + Trp CCA [ENA] ¢þ
>WENV170275989 CERM01240505 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 74 + Trp CCA [ENA] ¢þ
>WENV170297725 CESE01276227 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1538 1610 + Trp CCA [ENA] ¢þ
>WENV170305654 CESI01155659 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1739 1667 - Trp CCA [ENA] ¢þ
>WENV170325205 CEST01002712 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 28230 28158 - Trp CCA [ENA] ¢þ
>WENV170327838 CESU01107116 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3466 3538 + Trp CCA [ENA] ¢þ
>WENV170533225 CEWO01108572 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 161 233 + Trp CCA [ENA] ¢þ
>WENV170533468 CEWO01132192 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3517 3445 - Trp CCA [ENA] ¢þ
>WENV170538011 CEWR01045205 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 188 115 - Trp CCA [ENA] ¢þ
>WENV170603461 FUWD010310810 [FUWD] metagenome; unknown 98 24 - Trp CCA [ENA] ¢þ
>WENV170639211 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 33699 33625 - Trp CCA [ENA] ¢þ
>WENV170639267 JFJP01001724 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 66 139 + Trp CCA [ENA] ¢þ
>WENV170807351 MDSW01097126 [MDSW] marine metagenome; seawater 3707 3635 - Trp CCA [ENA] ¢þ
>WENV170810586 MDSW01151423 [MDSW] marine metagenome; seawater 4522 4450 - Trp CCA [ENA] ¢þ
>WENV170814974 MDSX01002410 [MDSX] marine metagenome; seawater 5439 5367 - Trp CCA [ENA] ¢þ
>WENV170820883 MDSY01013321 [MDSY] marine metagenome; seawater 2546 2474 - Trp CCA [ENA] ¢þ
>WENV170919355 MDTF01008253 [MDTF] marine metagenome; seawater 1742 1814 + Trp CCA [ENA] ¢þ
>CHL1810000617 AP014625 Stramenopiles Triparma laevis (AP014625) 17001 16929 - Trp CCA [ENA] ¡û
>CHL1810002648 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 26484 26412 - Trp CCA [ENA] ¡û
>CHL1810002674 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 29047 28974 - Trp CCA [ENA] ¡û
>CHL1810005313 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 25997 25925 - Trp CCA [ENA] ¡û
>CHL1810008369 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 26882 26809 - Trp CCA [ENA] ¡û
>CHL1810013614 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 30100 30173 + Trp CCA [ENA] ¡û
>CHL1810013666 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 20766 20694 - Trp CCA [ENA] ¡û
>CHL1810013673 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 25037 25109 + Trp CCA [ENA] ¡û
>CHL1810013701 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 30659 30733 + Trp CCA [ENA] ¡û
>CHL1810013728 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 24661 24735 + Trp CCA [ENA] ¡û
>CHL1810059245 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 37933 38008 + Trp CCA [ENA] ¡û
>CHL1810059297 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 28326 28398 + Trp CCA [ENA] ¡û
>CHL1810059328 MG755796 Stramenopiles Guinardia striata (MG755796) 40681 40755 + Trp CCA [ENA] ¡û
>CHL1810059358 MG755798 Stramenopiles Attheya longicornis (MG755798) 43334 43408 + Trp CCA [ENA] ¡û
>CHL1810059432 MG755801 Stramenopiles Triceratium dubium (MG755801) 27177 27249 + Trp CCA [ENA] ¡û
>CHL1810059485 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 21171 21099 - Trp CCA [ENA] ¡û
>CHL1810059520 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 24773 24847 + Trp CCA [ENA] ¡û
>CHL1810059628 MG755808 Stramenopiles Acanthoceras zachariasii (MG755808) 28866 28938 + Trp CCA [ENA] ¡û
>CHL090102741 EF067920 stramenopiles Phaeodactylum tricornutum 26877 26805 - Trp CCA [ENA] ¡û
>CHL090102750 EF067921 stramenopiles Thalassiosira pseudonana 24922 24995 + Trp CCA [ENA] ¡û
Identical group No.639042 (1 seq.)
>CHL1810046784 LC008447 Alveolata Lepidodinium chlorophorum (LC008447) 63301 63227 - Trp CCA [ENA] ¡û
Identical group No.669994 (1 seq.)
>CHL1810003213 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 26141 26070 - Trp CCA [ENA] ¡û
Identical group No.803292 (1 seq.)
>CHL090101382 AY217738 Alveolata Eimeria tenella 15004 15076 + Trp CCA [ENA] ¡û
Identical group No.828717 (1 seq.)
>CHL090103197 U87145 Alveolata Toxoplasma gondii 15340 15413 + Trp CCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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