tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = TCT

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.352263 (2 seq.)
>CHL090101386 AY217738 Alveolata Eimeria tenella 32550 32623 + Arg TCT [ENA] ¡û
>CHL090101396 AY217738 Alveolata Eimeria tenella 2172 2099 - Arg TCT [ENA] ¡û
Identical group No.467230 (67 seq.)
>WENV180037082 FVAA010587610 [FVAA] soil metagenome; Soil 1 73 + Arg TCT [ENA] ¢þ
>WENV180038606 LLBY010000546 [LLBY] soil metagenome; soil from tomato rhizosphere 32239 32167 - Arg TCT [ENA] ¢þ
>WENV180040784 LLBZ010014679 [LLBZ] soil metagenome; soil from tomato rhizosphere 14946 15018 + Arg TCT [ENA] ¢þ
>WENV180103770 OAPB01005375 [OAPB] marine metagenome; Sterile flask 533 605 + Arg TCT [ENA] ¢þ
>WENV180365016 OBOB01003039 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 587 661 + Arg TCT [ENA] ¢þ
>WENV180374693 OBOK01006624 [OBOK] marine metagenome; seawater 473 401 - Arg TCT [ENA] ¢þ
>WENV180375291 OBOL01001474 [OBOL] marine metagenome; Surface water 1576 1648 + Arg TCT [ENA] ¢þ
>WENV180376469 OBOM01012139 [OBOM] marine metagenome; Seawater 290 216 - Arg TCT [ENA] ¢þ
>WENV180387975 OBPG01020911 [OBPG] marine metagenome; Sterile flask 266 194 - Arg TCT [ENA] ¢þ
>WENV180388544 OBPH01021083 [OBPH] marine metagenome; Sterile flask 228 300 + Arg TCT [ENA] ¢þ
>WENV180388997 OBPI01014030 [OBPI] marine metagenome; Sterile flask 335 407 + Arg TCT [ENA] ¢þ
>WENV180390017 OBPK01013991 [OBPK] marine metagenome; Sterile flask 548 620 + Arg TCT [ENA] ¢þ
>WENV180394636 OBPS01030132 [OBPS] marine metagenome; ENVO:00002010 seawater 156 84 - Arg TCT [ENA] ¢þ
>WENV180399255 OBQG01042527 [OBQG] marine metagenome; ENV:00002010 125 53 - Arg TCT [ENA] ¢þ
>WENV180589546 OCOS01000010 [OCOS] marine metagenome; Sterile flask 5791 5719 - Arg TCT [ENA] ¢þ
>WENV180650559 OCSY01072847 [OCSY] marine metagenome; 30 L Plastic container 116 188 + Arg TCT [ENA] ¢þ
>WENV181092498 OEBK01003768 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 64 136 + Arg TCT [ENA] ¢þ
>WENV181321538 OFKM01009452 [OFKM] marine metagenome; sea ice 120 192 + Arg TCT [ENA] ¢þ
>WENV181322049 OFKP01001608 [OFKP] marine metagenome; sea ice 1090 1162 + Arg TCT [ENA] ¢þ
>WENV181323761 OFKZ01003331 [OFKZ] marine metagenome; sea ice 601 673 + Arg TCT [ENA] ¢þ
>WENV181323906 OFKZ01028858 [OFKZ] marine metagenome; sea ice 349 276 - Arg TCT [ENA] ¢þ
>WENV181324055 OFLB01000425 [OFLB] marine metagenome; seawater 805 733 - Arg TCT [ENA] ¢þ
>WENV181324764 OFLH01003831 [OFLH] marine metagenome; sea ice 710 636 - Arg TCT [ENA] ¢þ
>WENV181329601 OFLX01026663 [OFLX] seawater metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV183060140 OLHW01019825 [OLHW] seawater metagenome; Sea water 131 59 - Arg TCT [ENA] ¢þ
>WENV183614856 OOEA01004162 [OOEA] marine metagenome; sea ice 853 779 - Arg TCT [ENA] ¢þ
>WENV183615432 OOEB01016636 [OOEB] marine metagenome; sea ice 73 1 - Arg TCT [ENA] ¢þ
>WENV183616489 OOED01045426 [OOED] marine metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV183617603 OOEG01014289 [OOEG] marine metagenome; sea ice 519 591 + Arg TCT [ENA] ¢þ
>WENV183620944 OOFT01000304 [OOFT] marine metagenome; sea ice 2332 2404 + Arg TCT [ENA] ¢þ
>WENV183621098 OOFT01006318 [OOFT] marine metagenome; sea ice 1298 1225 - Arg TCT [ENA] ¢þ
>WENV183621278 OOFT01036931 [OOFT] marine metagenome; sea ice 623 551 - Arg TCT [ENA] ¢þ
>WENV183623260 OOFX01045240 [OOFX] marine metagenome; sea ice 233 161 - Arg TCT [ENA] ¢þ
>WENV183623338 OOFX01080405 [OOFX] marine metagenome; sea ice 454 382 - Arg TCT [ENA] ¢þ
>WENV183623634 OOGA01023372 [OOGA] marine metagenome; sea ice 327 254 - Arg TCT [ENA] ¢þ
>WENV183624941 OOGE01041437 [OOGE] marine metagenome; sea ice 148 76 - Arg TCT [ENA] ¢þ
>WENV183624956 OOGE01045325 [OOGE] marine metagenome; sea ice 439 367 - Arg TCT [ENA] ¢þ
>WENV183625631 OOGG01004608 [OOGG] marine metagenome; sea ice 330 403 + Arg TCT [ENA] ¢þ
>WENV183625730 OOGG01014742 [OOGG] marine metagenome; sea ice 737 665 - Arg TCT [ENA] ¢þ
>WENV183627555 OOGL01011912 [OOGL] marine metagenome; sea ice 709 781 + Arg TCT [ENA] ¢þ
>WENV183628448 OOGN01053461 [OOGN] marine metagenome; sea ice 221 293 + Arg TCT [ENA] ¢þ
>WENV170506566 CEVW01277827 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 260 334 + Arg TCT [ENA] ¢þ
>WENV170533134 CEWO01099466 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 429 503 + Arg TCT [ENA] ¢þ
>WENV170533172 CEWO01103023 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 386 458 + Arg TCT [ENA] ¢þ
>WENV170567068 FLLY01038718 [FLLY] seawater metagenome; seawater 99 27 - Arg TCT [ENA] ¢þ
>WENV170568727 FLMP01071408 [FLMP] seawater metagenome; seawater 870 798 - Arg TCT [ENA] ¢þ
>WENV170639252 JFJP01001711 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4002 4074 + Arg TCT [ENA] ¢þ
>WENV170813809 MDSW01206453 [MDSW] marine metagenome; seawater 552 626 + Arg TCT [ENA] ¢þ
>WENV170817009 MDSX01041960 [MDSX] marine metagenome; seawater 5077 5149 + Arg TCT [ENA] ¢þ
>CHL1810002657 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 19587 19659 + Arg TCT [ENA] ¡û
>CHL1810005316 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 12792 12719 - Arg TCT [ENA] ¡û
>CHL1810008293 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 6463 6391 - Arg TCT [ENA] ¡û
>CHL1810008317 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 42523 42451 - Arg TCT [ENA] ¡û
>CHL1810008425 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 48130 48056 - Arg TCT [ENA] ¡û
>CHL1810010644 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 25435 25363 - Arg TCT [ENA] ¡û
>CHL1810013633 KJ958479 Stramenopiles Chaetoceros simplex (KJ958479) 55778 55706 - Arg TCT [ENA] ¡û
>CHL1810013644 KJ958482 Stramenopiles Rhizosolenia imbricata (KJ958482) 55265 55337 + Arg TCT [ENA] ¡û
>CHL1810013699 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 8383 8455 + Arg TCT [ENA] ¡û
>CHL1810059290 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 42615 42543 - Arg TCT [ENA] ¡û
>CHL1810059301 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 53284 53356 + Arg TCT [ENA] ¡û
>CHL1810059349 MG755796 Stramenopiles Guinardia striata (MG755796) 5675 5603 - Arg TCT [ENA] ¡û
>CHL1810059400 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 43093 43021 - Arg TCT [ENA] ¡û
>CHL1810059429 MG755800 Stramenopiles Entomoneis sp. (MG755800) 16680 16608 - Arg TCT [ENA] ¡û
>CHL1810059437 MG755801 Stramenopiles Triceratium dubium (MG755801) 54859 54931 + Arg TCT [ENA] ¡û
>CHL1810059463 MG755802 Stramenopiles Rhizosolenia fallax (MG755802) 56277 56349 + Arg TCT [ENA] ¡û
>CHL090102745 EF067920 stramenopiles Phaeodactylum tricornutum 16962 16890 - Arg TCT [ENA] ¡û
>CHL090103372 Z67753 stramenopiles Odontella sinensis 64846 64773 - Arg TCT [ENA] ¡û
Identical group No.480778 (2 seq.)
>CHL1810003193 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 84802 84874 + Arg TCT [ENA] ¡û
>CHL1810003203 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 58955 58883 - Arg TCT [ENA] ¡û
Identical group No.492373 (3 seq.)
>WENV180015595 FQKF010951464 [FQKF] soil metagenome; Soil 403 331 - Arg TCT [ENA] ¢þ
>CHL1810002630 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 16905 16977 + Arg TCT [ENA] ¡û
>CHL1810008373 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 16888 16816 - Arg TCT [ENA] ¡û
Identical group No.629583 (2 seq.)
>CHL090103199 U87145 Alveolata Toxoplasma gondii 32832 32904 + Arg TCT [ENA] ¡û
>CHL090103207 U87145 Alveolata Toxoplasma gondii 2165 2093 - Arg TCT [ENA] ¡û
Identical group No.833182 (1 seq.)
>CHL1810046776 LC008447 Alveolata Lepidodinium chlorophorum (LC008447) 36143 36215 + Arg TCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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