This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Herpesvirales
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.170488 (4 seq.)
>VRL181000448
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
4508
4586
+
Arg
CCT
[ENA]
¡û
>VRL181000451
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
145866
145788
-
Arg
CCT
[ENA]
¡û
>VRL181000540
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
4508
4586
+
Arg
CCT
[ENA]
¡û
>VRL181000543
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
146039
145961
-
Arg
CCT
[ENA]
¡û
Identical group No.238683 (3 seq.)
>VRL0100047
AF105037
Herpesvirales
Murid herpesvirus 4
5384
5460
+
Gly
GCC
[ENA]
¡û
>VRL0100066
U97553
Herpesvirales
Murid herpesvirus 4
5384
5460
+
Gly
GCC
[ENA]
¡û
>VRL0100069
Y11705
Herpesvirales
Murid herpesvirus 4
5279
5355
+
Gly
GCC
[ENA]
¡û
Identical group No.334579 (2 seq.)
>VRL181000001
EF495130
Herpesvirales
Wood mouse herpesvirus Brest/An711 (EF495130)
2563
2636
+
Met
CAT
[ENA]
¡û
>VRL181000010
GQ169129
Herpesvirales
Wood mouse herpesvirus WM8 (GQ169129)
1088
1161
+
Met
CAT
[ENA]
¡û
Identical group No.350270 (3 seq.)
>VRL0100045
AF105037
Herpesvirales
Murid herpesvirus 4
1182
1255
+
Met
CAT
[ENA]
¡û
>VRL0100064
U97553
Herpesvirales
Murid herpesvirus 4
1182
1255
+
Met
CAT
[ENA]
¡û
>VRL0100067
Y11705
Herpesvirales
Murid herpesvirus 4
1077
1150
+
Met
CAT
[ENA]
¡û
Identical group No.433573 (5 seq.)
>VRL0100046
AF105037
Herpesvirales
Murid herpesvirus 4
1588
1659
+
Thr
AGT
[ENA]
¡û
>VRL0100065
U97553
Herpesvirales
Murid herpesvirus 4
1588
1659
+
Thr
AGT
[ENA]
¡û
>VRL0100068
Y11705
Herpesvirales
Murid herpesvirus 4
1483
1554
+
Thr
AGT
[ENA]
¡û
>VRL181000002
EF495130
Herpesvirales
Wood mouse herpesvirus Brest/An711 (EF495130)
2969
3040
+
Thr
AGT
[ENA]
¡û
>VRL181000011
GQ169129
Herpesvirales
Wood mouse herpesvirus WM8 (GQ169129)
1494
1565
+
Thr
AGT
[ENA]
¡û
Identical group No.458616 (2 seq.)
>VRL181000449
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
8658
8730
+
Asp
GTC
[ENA]
¡û
>VRL181000541
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
8659
8731
+
Asp
GTC
[ENA]
¡û
Identical group No.458617 (2 seq.)
>VRL181000452
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
139424
139353
-
Asp
GTC
[ENA]
¡û
>VRL181000544
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
139598
139527
-
Asp
GTC
[ENA]
¡û
Identical group No.507928 (2 seq.)
>VRL181000450
KJ668231
Herpesvirales
Falconid herpesvirus 1 S-18 (KJ668231)
11730
11800
+
Asp
GTC
[ENA]
¡û
>VRL181000542
KX589235
Herpesvirales
Columbid alphaherpesvirus 1 HLJ (KX589235)
11736
11806
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK