tRNA genes clustered and arranged according to each identical group

Hydrogenophilia

Anticodon = CCG

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.276824 (3 seq.)
>W1711414510 MGZO01000090 Hydrogenophilia Hydrogenophilales bacterium RIFOXYD1_FULL_62_11 [MGZO] 45963 46039 + Arg CCG [ENA] ¡û
>W1610593876 LDUG01000020 Betaproteobacteria Thiobacillus denitrificans [LDUG] 30352 30276 - Arg CCG [ENA] ¡û
>W1710713351 LDUG01000020 Betaproteobacteria Thiobacillus denitrificans [LDUG] 30352 30276 - Arg CCG [ENA] ¡û
Identical group No.287697 (51 seq.)
>W1711385360 MEEC01000256 Betaproteobacteria Lautropia sp. SCN 70-15 [MEEC] 2902 2826 - Arg CCG [ENA] ¡û
>W1711386461 MEFK01000241 Betaproteobacteria Thiobacillus sp. SCN 63-374 [MEFK] 7019 6943 - Arg CCG [ENA] ¡û
>W1711387309 MEGN01000001 Betaproteobacteria Thiobacillus sp. SCN 65-179 [MEGN] 248143 248067 - Arg CCG [ENA] ¡û
>W1711387375 MEGO01000073 Betaproteobacteria Thiobacillus sp. SCN 64-317 [MEGO] 10442 10366 - Arg CCG [ENA] ¡û
>W1711387402 MEGP01000025 Betaproteobacteria Thiobacillus sp. SCN 63-57 [MEGP] 44508 44584 + Arg CCG [ENA] ¡û
>W1711414476 MGZN01000201 Hydrogenophilia Hydrogenophilales bacterium RIFOXYA1_FULL_63_33 [MGZN] 1963 1887 - Arg CCG [ENA] ¡û
>W1711423789 MIDJ01000025 Betaproteobacteria Thiobacillus sp. GWE1_62_9 [MIDJ] 15364 15288 - Arg CCG [ENA] ¡û
>W1711504048 MKUE01000110 Betaproteobacteria Thiobacillus sp. 65-1059 [MKUE] 15706 15630 - Arg CCG [ENA] ¡û
>W1711504095 MKUF01000015 Betaproteobacteria Thiobacillus sp. 65-69 [MKUF] 353164 353240 + Arg CCG [ENA] ¡û
>W1711504108 MKUG01000015 Betaproteobacteria Thiobacillus sp. 65-1402 [MKUG] 15960 15884 - Arg CCG [ENA] ¡û
>W1711506510 MKWL01000022 Betaproteobacteria Thiobacillus sp. 0-1251 [MKWL] 100830 100906 + Arg CCG [ENA] ¡û
>W1711506554 MKWM01000073 Betaproteobacteria Thiobacillus sp. 63-78 [MKWM] 22935 22859 - Arg CCG [ENA] ¡û
>W1711506587 MKWN01000043 Betaproteobacteria Thiobacillus sp. 65-29 [MKWN] 69947 70023 + Arg CCG [ENA] ¡û
>W131160251 AQWL01000002 Betaproteobacteria Thiobacillus denitrificans DSM 12475 [AQWL] 214712 214788 + Arg CCG [ENA] ¡û
>W131163045 AQZM01000002 Betaproteobacteria Methyloversatilis universalis EHg5 [AQZM] 133877 133953 + Arg CCG [ENA] ¡û
>W131166926 ARCV01000005 Betaproteobacteria Methyloversatilis thermotolerans NVD [ARCV] 420350 420274 - Arg CCG [ENA] ¡û
>W131168097 ARDU01000010 Betaproteobacteria Thiobacillus thioparus DSM 505 [ARDU] 101235 101159 - Arg CCG [ENA] ¡û
>W131170303 ARFL01000001 Betaproteobacteria Methyloversatilis discipulorum RZ94 [ARFL] 534924 535000 + Arg CCG [ENA] ¡û
>W131186131 ARVV01000001 Betaproteobacteria Methyloversatilis discipulorum RZ18-153 [ARVV] 225469 225393 - Arg CCG [ENA] ¡û
>W131186644 ARWH01000001 Betaproteobacteria Methyloversatilis universalis Fam500 [ARWH] 3436289 3436365 + Arg CCG [ENA] ¡û
>C025380 CP000116 Betaproteobacteria Thiobacillus denitrificans ATCC 25259 [CP000116] 157660 157736 + Arg CCG [Ensembl] ¡û
>WENV180254538 OBEQ010638613 [OBEQ] groundwater metagenome; groundwater 1205 1129 - Arg CCG [ENA] ¢þ
>WENV180297008 OBJA01007440 [OBJA] soil metagenome; sediment, water from around vicinity 4069 4145 + Arg CCG [ENA] ¢þ
>WENV180310880 OBJT01043030 [OBJT] soil metagenome; soil 471 395 - Arg CCG [ENA] ¢þ
>WENV181167736 OEIU01065881 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 170 94 - Arg CCG [ENA] ¢þ
>WENV181223045 OFDC01001381 [OFDC] hot springs metagenome; Water 3 79 + Arg CCG [ENA] ¢þ
>WENV181227588 OFDN01019909 [OFDN] hot springs metagenome; Water 2083 2159 + Arg CCG [ENA] ¢þ
>WENV181312217 OFJB01056630 [OFJB] sludge metagenome; sludge 663 739 + Arg CCG [ENA] ¢þ
>WENV181411827 OGCI01050417 [OGCI] hot springs metagenome; Hot spring water 179 103 - Arg CCG [ENA] ¢þ
>WENV181414822 OGCL01001531 [OGCL] hot springs metagenome; Hot spring water 17810 17886 + Arg CCG [ENA] ¢þ
>W141216080 AZUP01000001 Betaproteobacteria Methyloversatilis discipulorum FAM1 [AZUP] 2868235 2868311 + Arg CCG [ENA] ¡û
>WENV170006546 AMWB02031160 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 2930 2854 - Arg CCG [ENA] ¢þ
>WENV170007412 AMWB02119047 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 34 110 + Arg CCG [ENA] ¢þ
>WENV170650114 JRYD01012029 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 3662 3586 - Arg CCG [ENA] ¢þ
>WENV170652614 JRYH01009156 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 14579 14503 - Arg CCG [ENA] ¢þ
>WENV170653114 JRYI01004321 [JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO 1013 1089 + Arg CCG [ENA] ¢þ
>WENV170654734 JRYL01010574 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 472 396 - Arg CCG [ENA] ¢þ
>WENV170713185 LNFM01025748 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5424 5348 - Arg CCG [ENA] ¢þ
>C181043018 CP020026 Betaproteobacteria Rhodocyclaceae bacterium Thauera-like [CP020026] 46208 46132 - Arg CCG - ¡û
>C181081464 CP023439 Betaproteobacteria Thauera sp. K11 [CP023439] 4882541 4882617 + Arg CCG - ¡û
>C181165161 CP028425 Betaproteobacteria Zoogloeaceae bacteirum Par-f-2 [CP028425] 3092217 3092141 - Arg CCG - ¡û
>C181176832 CP029331 Betaproteobacteria Thauera hydrothermalis GD-2 [CP029331] 46202 46126 - Arg CCG - ¡û
>W09101576 AAFH01000002 Betaproteobacteria Thiobacillus denitrificans ATCC 25259 [AAFH] 508634 508710 + Arg CCG [ENA] ¡û
>W1810005517 BFBP01000022 Betaproteobacteria Azospira sp. I13 [BFBP] 1047 1123 + Arg CCG [ENA] ¡û
>W1810444917 PZKC01000010 Betaproteobacteria Pseudothauera lacus D20 [PZKC] 83225 83301 + Arg CCG [ENA] ¡û
>W1810679169 QKOE01000008 Betaproteobacteria Parazoarcus communis SWub3 [QKOE] 34730 34654 - Arg CCG [ENA] ¡û
>W11114398 ADDK02000001 Betaproteobacteria Azospira oryzae PS [ADDK] 1747912 1747988 + Arg CCG [ENA] ¡û
>W11162834 AFHG01000053 Betaproteobacteria Methyloversatilis universalis FAM5 [AFHG] 140890 140814 - Arg CCG [ENA] ¡û
>C121006927 CP003153 Betaproteobacteria Azospira oryzae PS [CP003153] 964543 964619 + Arg CCG [Ensembl] ¡û
>W1610617582 LGUD01000001 Betaproteobacteria Rhodocyclaceae bacterium Paddy-1 [LGUD] 504449 504525 + Arg CCG [ENA] ¡û
>W1710743132 LGUD01000001 Betaproteobacteria Rhodocyclaceae bacterium Paddy-1 [LGUD] 504449 504525 + Arg CCG [ENA] ¡û
Identical group No.407891 (1 seq.)
>W1711583417 MNXE01000031 Hydrogenophilia Hydrogenophilaceae bacterium CG1_02_62_390 [MNXE] 22442 22518 + Arg CCG [ENA] ¡û
Identical group No.565160 (5 seq.)
>W131225557 AUDR01000012 Hydrogenophilia Tepidiphilus margaritifer DSM 15129 [AUDR] 128661 128586 - Arg CCG [ENA] ¡û
>WENV170008102 AMZC01001728 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 1339 1264 - Arg CCG [ENA] ¢þ
>W1510741365 CYHH01000003 Hydrogenophilia Tepidiphilus thermophilus JCM 19170 [CYHH] 37369 37444 + Arg CCG [ENA] ¡û
>W1610632366 LIPU01000003 Hydrogenophilia Tepidiphilus thermophilus [LIPU] 37369 37444 + Arg CCG [ENA] ¡û
>W1710766752 LIPU01000003 Hydrogenophilia Tepidiphilus thermophilus [LIPU] 37369 37444 + Arg CCG [ENA] ¡û
Identical group No.572228 (1 seq.)
>C191003406 AP018558 Hydrogenophilia Hydrogenophilus thermoluteolus TH-1 [AP018558] 119294 119369 + Arg CCG - ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK