tRNA genes clustered and arranged according to each identical group

Line Islands Corals, microbial fraction from water of Palmyra (SRP000140)

Anticodon = CAT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.306714 (18 seq.)
>W1711191106 LWSJ01000005 Planctomycetota Roseimaritima ulvae [LWSJ] 20399 20473 + Met CAT [ENA] ¡û
>W131050196 AMWG01000021 Planctomycetota Rhodopirellula baltica SWK14 [AMWG] 207448 207524 + Met CAT [ENA] ¡û
>W131065041 ANMO01000216 Planctomycetota Rhodopirellula europaea 6C [ANMO] 383068 383141 + Met CAT [ENA] ¡û
>W131066004 ANOF01000188 Planctomycetota Rhodopirellula europaea SH398 [ANOF] 57556 57480 - Met CAT [ENA] ¡û
>C016640 BX119912 Planctomycetota Rhodopirellula baltica [BX119912] 3655905 3655829 - Met CAT [Ensembl] ¡û
>W141041929 AMCW01000055 Planctomycetota Rhodopirellula baltica SH28 [AMCW] 89633 89557 - Met CAT [ENA] ¡û
>WENV180587869 OCOO01082987 [OCOO] marine metagenome; seawater 224 298 + Met CAT [ENA] ¢þ
>WENV182553727 OJCR01025058 [OJCR] seawater metagenome; Sea water 788 714 - Met CAT [ENA] ¢þ
>ENV08000879 ABMK01229656 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 9 83 + Met CAT [ENA] ¡û
>WENV170595859 FUFK012003154 [FUFK] metagenome; unknown 377 450 + Met CAT [ENA] ¢þ
>W1910938954 NIZW01000015 Planctomycetota Rhodopirellula bahusiensis SWK21 [NIZW] 167553 167479 - Met CAT [ENA] ¡û
>W1911146636 NPDI01000047 Planctomycetota Rhodopirellula sp. MGV [NPDI] 90784 90858 + Met CAT [ENA] ¡û
>SRA1000862 SRR001048.11088 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 9 83 + Met CAT [SRA]
>SRA1000877 SRR001048.183293 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 9 83 + Met CAT [SRA]
>W1810237735 PPHI01000089 Planctomycetota Rhodopirellula baltica BR-MGV [PPHI] 70765 70691 - Met CAT [ENA] ¡û
>W1511646522 LECT01000031 Planctomycetota Rhodopirellula islandica K833 [LECT] 166262 166336 + Met CAT [ENA] ¡û
>W11156023 AFAR01000103 Planctomycetota Rhodopirellula baltica WH47 [AFAR] 20409 20333 - Met CAT [ENA] ¡û
>W1610992709 LWSJ01000005 Planctomycetota Roseimaritima ulvae [LWSJ] 20399 20473 + Met CAT [ENA] ¡û
Identical group No.551034 (3 seq.)
>ENV08000873 ABMK01166720 marine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 82 10 - Met CAT [ENA] ¡û
>WENV170441096 CEUV01147993 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 837 765 - Met CAT [ENA] ¢þ
>SRA1000874 SRR001048.159846 Line Islands Corals, microbial fraction from water of Palmyra (SRP000140) 82 10 - Met CAT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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