tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CGC

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.499714 (9 seq.)
>W1711744490 MUHX01000010 Synergistota Pyramidobacter sp. C12-8 [MUHX] 58453 58528 + Ala CGC [ENA] ¡û
>WENV180657867 OCVV010709861 [OCVV] gut metagenome; gut 314 389 + Ala CGC [ENA] ¢þ
>WENV180657869 OCVV010709861 [OCVV] gut metagenome; gut 314 389 + Ala CGC [ENA] ¢þ
>WENV181638883 OGNC01026554 [OGNC] metagenome; Human gut stool 279 204 - Ala CGC [ENA] ¢þ
>WENV183419811 OMAZ01049276 [OMAZ] human gut metagenome; feces 485 560 + Ala CGC [ENA] ¢þ
>WENV183484372 OMFO01026518 [OMFO] human gut metagenome; feces 137 62 - Ala CGC [ENA] ¢þ
>WENV183763962 PPYE01311358 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 28756 28831 + Ala CGC [ENA] ¢þ
>W10113009 ADFP01000008 Synergistota Pyramidobacter piscolens W5455 [ADFP] 67 142 + Ala CGC [ENA] ¡û
>W11116236 ADFP01000008 Synergistota Pyramidobacter piscolens W5455 [ADFP] 67 142 + Ala CGC [ENA] ¡û
Identical group No.516295 (10 seq.)
>WENV180789271 ODIS01387643 [ODIS] human metagenome; G_DNA_Supragingival plaque 66 141 + Ala CGC [ENA] ¢þ
>WENV180797792 ODJB01125366 [ODJB] human metagenome; G_DNA_Supragingival plaque 424 349 - Ala CGC [ENA] ¢þ
>WENV180809806 ODJK01050682 [ODJK] human metagenome; G_DNA_Subgingival plaque 110 185 + Ala CGC [ENA] ¢þ
>WENV180945288 ODUC01104496 [ODUC] human metagenome; G_DNA_Supragingival plaque 175 250 + Ala CGC [ENA] ¢þ
>WENV181051130 ODYD01202178 [ODYD] human metagenome; G_DNA_Supragingival plaque 134 209 + Ala CGC [ENA] ¢þ
>WENV181076684 OEAP01010568 [OEAP] human metagenome; G_DNA_Supragingival plaque 3022 2947 - Ala CGC [ENA] ¢þ
>WENV181080808 OEAS01084067 [OEAS] human metagenome; G_DNA_Supragingival plaque 104 29 - Ala CGC [ENA] ¢þ
>WENV181091942 OEBC01151199 [OEBC] human metagenome; G_DNA_Supragingival plaque 306 381 + Ala CGC [ENA] ¢þ
>WENV183715234 PDWI01229204 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 939 864 - Ala CGC [ENA] ¢þ
>C161104039 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1117009 1116934 - Ala CGC - ¡û
Identical group No.554145 (3 seq.)
>W141146860 AWWC01000020 Synergistota Jonquetella sp. BV3C21 [AWWC] 14743 14818 + Ala CGC [ENA] ¡û
>W09132969 ACOO02000025 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 13925 14000 + Ala CGC [ENA] ¡û
>W121017492 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 310486 310561 + Ala CGC [ENA] ¡û
Identical group No.658520 (9 seq.)
>WENV170678343 LDZT01014019 [LDZT] terrestrial metagenome; oil reservoir sample SB1 40 114 + Ala CGC [ENA] ¢þ
>WENV170678606 LDZU01003376 [LDZU] terrestrial metagenome; oil reservoir sample SB2 57 131 + Ala CGC [ENA] ¢þ
>WENV170967224 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 122589 122663 + Ala CGC [ENA] ¢þ
>WENV170972265 MTKX01025518 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 237 311 + Ala CGC [ENA] ¢þ
>WENV170978115 MTKZ01041200 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 13730 13804 + Ala CGC [ENA] ¢þ
>W1610613695 LGGE01000012 Synergistota Synergistales bacterium 57_84 [LGGE] 40 114 + Ala CGC [ENA] ¡û
>W1610614144 LGGV01000001 Synergistota Synergistales bacterium 58_81 [LGGV] 57 131 + Ala CGC [ENA] ¡û
>W1710734848 LGGE01000012 Synergistota Synergistales bacterium 57_84 [LGGE] 40 114 + Ala CGC [ENA] ¡û
>W1710735227 LGGV01000001 Synergistota Synergistales bacterium 58_81 [LGGV] 57 131 + Ala CGC [ENA] ¡û
Identical group No.673443 (2 seq.)
>C121008079 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 885636 885562 - Ala CGC [Ensembl] ¡û
>W1710594053 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 201372 201446 + Ala CGC [ENA] ¡û
Identical group No.674603 (26 seq.)
>W1711137626 LVBQ01000057 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1483 1409 - Ala CGC [ENA] ¡û
>W1712039380 NFJQ01000010 Synergistota Cloacibacillus sp. An23 [NFJQ] 146164 146238 + Ala CGC [ENA] ¡û
>C171050566 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1826943 1826869 - Ala CGC - ¡û
>WENV181908675 OGYB01000277 [OGYB] human gut metagenome; faeces 4730 4656 - Ala CGC [ENA] ¢þ
>WENV181910628 OGYC01024532 [OGYC] human gut metagenome; faeces 117 191 + Ala CGC [ENA] ¢þ
>WENV181914579 OGYF01000478 [OGYF] human gut metagenome; faeces 4937 5011 + Ala CGC [ENA] ¢þ
>WENV182005717 OHBE01013067 [OHBE] human gut metagenome; faeces 392 466 + Ala CGC [ENA] ¢þ
>WENV182031225 OHCS01006036 [OHCS] human gut metagenome; feces 2746 2820 + Ala CGC [ENA] ¢þ
>WENV182143500 OHKV01002349 [OHKV] human gut metagenome; feces 3061 2987 - Ala CGC [ENA] ¢þ
>WENV182212767 OHQG01006607 [OHQG] human gut metagenome; feces 1820 1746 - Ala CGC [ENA] ¢þ
>WENV182215884 OHQM01005647 [OHQM] human gut metagenome; feces 2896 2970 + Ala CGC [ENA] ¢þ
>WENV182220976 OHQS01024422 [OHQS] human gut metagenome; feces 856 782 - Ala CGC [ENA] ¢þ
>WENV182537611 OIXH01011377 [OIXH] human gut metagenome; faeces 1009 1083 + Ala CGC [ENA] ¢þ
>WENV183039176 OLGB01004012 [OLGB] human gut metagenome; faeces 215 289 + Ala CGC [ENA] ¢þ
>WENV183488841 OMFZ01002131 [OMFZ] human gut metagenome; feces 289 215 - Ala CGC [ENA] ¢þ
>WENV183580177 OOCM01028024 [OOCM] human gut metagenome; human gut 72 146 + Ala CGC [ENA] ¢þ
>WENV170685884 LFRM01113997 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 505 579 + Ala CGC [ENA] ¢þ
>W141452030 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 412151 412225 + Ala CGC [ENA] ¡û
>W141701206 JMKI01000036 Synergistota Synergistes jonesii [JMKI] 85962 86036 + Ala CGC [ENA] ¡û
>W121000488 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 41906 41980 + Ala CGC [ENA] ¡û
>W1610948746 LVBQ01000057 Synergistota Synergistales bacterium Syner_03 [LVBQ] 1483 1409 - Ala CGC [ENA] ¡û
>W1710629247 JPZQ01000040 Synergistota Synergistes jonesii [JPZQ] 85063 85137 + Ala CGC [ENA] ¡û
>W1710629291 JPZR01000030 Synergistota Synergistes jonesii [JPZR] 85065 85139 + Ala CGC [ENA] ¡û
>W1710629333 JPZS01000033 Synergistota Synergistes jonesii [JPZS] 85063 85137 + Ala CGC [ENA] ¡û
>W1710631843 JQEK01000045 Synergistota Synergistes jonesii [JQEK] 85064 85138 + Ala CGC [ENA] ¡û
>W1710631881 JQEL01000036 Synergistota Synergistes jonesii [JQEL] 85064 85138 + Ala CGC [ENA] ¡û
Identical group No.676119 (6 seq.)
>W1711629550 MPPC01000010 Synergistota Aminobacterium sp. EBM-42 [MPPC] 233722 233796 + Ala CGC [ENA] ¡û
>W141278997 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 1209411 1209485 + Ala CGC [ENA] ¡û
>WENV170657118 JTFO01088202 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 55 129 + Ala CGC [ENA] ¢þ
>WENV170685551 LFRM01097755 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 319 393 + Ala CGC [ENA] ¢þ
>WENV170719194 LSQX01104951 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 273495 273569 + Ala CGC [ENA] ¢þ
>C10100328 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 996396 996322 - Ala CGC [Ensembl] ¡û
Identical group No.681850 (5 seq.)
>WENV183515350 OMKS01058415 [OMKS] sediment metagenome; hot spring sediment 191 117 - Ala CGC [ENA] ¢þ
>WENV170676972 LDZS01003840 [LDZS] terrestrial metagenome; oil reservoir sample K3 7771 7697 - Ala CGC [ENA] ¢þ
>C121005703 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1131342 1131268 - Ala CGC [Ensembl] ¡û
>W1610613334 LGFS01000002 Synergistota Thermovirga lienii [LGFS] 7771 7697 - Ala CGC [ENA] ¡û
>W1710734541 LGFS01000002 Synergistota Thermovirga lienii [LGFS] 7771 7697 - Ala CGC [ENA] ¡û
Identical group No.683545 (11 seq.)
>WENV181409405 OGCI01000159 [OGCI] hot springs metagenome; Hot spring water 38998 38924 - Ala CGC [ENA] ¢þ
>WENV170563197 CZCB01011742 [CZCB] anaerobic digester metagenome; anaerobic digester 2635 2709 + Ala CGC [ENA] ¢þ
>WENV170676918 LDZS01003200 [LDZS] terrestrial metagenome; oil reservoir sample K3 21678 21604 - Ala CGC [ENA] ¢þ
>W09110132 ABUW01000004 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 75641 75715 + Ala CGC [ENA] ¡û
>W09126597 ACJX01000115 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 1425 1351 - Ala CGC [ENA] ¡û
>C10112976 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 879262 879336 + Ala CGC [Ensembl] ¡û
>W11138607 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 83000 83074 + Ala CGC [ENA] ¡û
>W121031628 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 865473 865547 + Ala CGC [ENA] ¡û
>W1610613286 LGFQ01000020 Synergistota Synergistales bacterium 54_24 [LGFQ] 21678 21604 - Ala CGC [ENA] ¡û
>W1710530830 FNPD01000003 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 176373 176299 - Ala CGC [ENA] ¡û
>W1710734493 LGFQ01000020 Synergistota Synergistales bacterium 54_24 [LGFQ] 21678 21604 - Ala CGC [ENA] ¡û
Identical group No.684090 (6 seq.)
>WENV170677155 LDZT01003271 [LDZT] terrestrial metagenome; oil reservoir sample SB1 17567 17641 + Ala CGC [ENA] ¢þ
>WENV170679044 LDZU01006790 [LDZU] terrestrial metagenome; oil reservoir sample SB2 7654 7728 + Ala CGC [ENA] ¢þ
>W1610613616 LGGB01000023 Synergistota Synergistales bacterium 53_16 [LGGB] 17567 17641 + Ala CGC [ENA] ¡û
>W1610614491 LGHG01000041 Synergistota Synergistales bacterium 54_9 [LGHG] 7654 7728 + Ala CGC [ENA] ¡û
>W1710734788 LGGB01000023 Synergistota Synergistales bacterium 53_16 [LGGB] 17567 17641 + Ala CGC [ENA] ¡û
>W1710735472 LGHG01000041 Synergistota Synergistales bacterium 54_9 [LGHG] 7654 7728 + Ala CGC [ENA] ¡û
Identical group No.717775 (4 seq.)
>WENV183710576 PDWI01049562 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2055 1981 - Ala CGC [ENA] ¢þ
>WENV183717197 PDWJ01000566 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 11742 11668 - Ala CGC [ENA] ¢þ
>WENV183721171 PDWJ01057633 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 383 309 - Ala CGC [ENA] ¢þ
>W09108911 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 122664 122738 + Ala CGC [ENA] ¡û
Identical group No.744201 (2 seq.)
>WENV170656377 JTFO01011938 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 791 717 - Ala CGC [ENA] ¢þ
>W1710608678 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 100983 100909 - Ala CGC [ENA] ¡û
Identical group No.762363 (1 seq.)
>W141278979 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 826805 826731 - Ala CGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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