tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = TCT

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.279667 (18 seq.)
>WENV180096320 MTBK01123270 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 366 442 + Arg TCT [ENA] ¢þ
>WENV181230114 OFEK01000298 [OFEK] activated sludge metagenome; Anaerobic digester 14272 14348 + Arg TCT [ENA] ¢þ
>WENV183516425 OMKS01177328 [OMKS] sediment metagenome; hot spring sediment 401 325 - Arg TCT [ENA] ¢þ
>WENV170677158 LDZT01003271 [LDZT] terrestrial metagenome; oil reservoir sample SB1 17871 17947 + Arg TCT [ENA] ¢þ
>WENV170678346 LDZT01014019 [LDZT] terrestrial metagenome; oil reservoir sample SB1 348 424 + Arg TCT [ENA] ¢þ
>WENV170678609 LDZU01003376 [LDZU] terrestrial metagenome; oil reservoir sample SB2 365 441 + Arg TCT [ENA] ¢þ
>WENV170679047 LDZU01006790 [LDZU] terrestrial metagenome; oil reservoir sample SB2 7958 8034 + Arg TCT [ENA] ¢þ
>WENV170967227 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 122896 122972 + Arg TCT [ENA] ¢þ
>WENV170972268 MTKX01025518 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 544 620 + Arg TCT [ENA] ¢þ
>WENV170978118 MTKZ01041200 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 14037 14113 + Arg TCT [ENA] ¢þ
>W1610613619 LGGB01000023 Synergistota Synergistales bacterium 53_16 [LGGB] 17871 17947 + Arg TCT [ENA] ¡û
>W1610613698 LGGE01000012 Synergistota Synergistales bacterium 57_84 [LGGE] 348 424 + Arg TCT [ENA] ¡û
>W1610614147 LGGV01000001 Synergistota Synergistales bacterium 58_81 [LGGV] 365 441 + Arg TCT [ENA] ¡û
>W1610614494 LGHG01000041 Synergistota Synergistales bacterium 54_9 [LGHG] 7958 8034 + Arg TCT [ENA] ¡û
>W1710734791 LGGB01000023 Synergistota Synergistales bacterium 53_16 [LGGB] 17871 17947 + Arg TCT [ENA] ¡û
>W1710734851 LGGE01000012 Synergistota Synergistales bacterium 57_84 [LGGE] 348 424 + Arg TCT [ENA] ¡û
>W1710735230 LGGV01000001 Synergistota Synergistales bacterium 58_81 [LGGV] 365 441 + Arg TCT [ENA] ¡û
>W1710735475 LGHG01000041 Synergistota Synergistales bacterium 54_9 [LGHG] 7958 8034 + Arg TCT [ENA] ¡û
Identical group No.279965 (8 seq.)
>WENV170563809 CZCB01030560 [CZCB] anaerobic digester metagenome; anaerobic digester 3194 3118 - Arg TCT [ENA] ¢þ
>WENV170684597 LFRM01047713 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 145 221 + Arg TCT [ENA] ¢þ
>WENV170691137 LFRM01381674 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 5554 5478 - Arg TCT [ENA] ¢þ
>WENV170968856 MTKW01015695 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1950 2026 + Arg TCT [ENA] ¢þ
>W09126600 ACJX01000115 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 986 910 - Arg TCT [ENA] ¡û
>C121008082 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 884841 884765 - Arg TCT [Ensembl] ¡û
>W1710530833 FNPD01000003 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 175932 175856 - Arg TCT [ENA] ¡û
>W1710594056 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 204275 204351 + Arg TCT [ENA] ¡û
Identical group No.284788 (10 seq.)
>W1712039381 NFJQ01000010 Synergistota Cloacibacillus sp. An23 [NFJQ] 67747 67671 - Arg TCT [ENA] ¡û
>WENV180224033 OBBI01027454 [OBBI] human gut metagenome; human gut 49 125 + Arg TCT [ENA] ¢þ
>WENV180240576 OBDD01018894 [OBDD] human gut metagenome; human gut 343 267 - Arg TCT [ENA] ¢þ
>WENV182688088 OJOA01060762 [OJOA] human gut metagenome; human gut 108 32 - Arg TCT [ENA] ¢þ
>W141701219 JMKI01000047 Synergistota Synergistes jonesii [JMKI] 18396 18320 - Arg TCT [ENA] ¡û
>W1710629260 JPZQ01000056 Synergistota Synergistes jonesii [JPZQ] 17566 17490 - Arg TCT [ENA] ¡û
>W1710629301 JPZR01000046 Synergistota Synergistes jonesii [JPZR] 17569 17493 - Arg TCT [ENA] ¡û
>W1710629343 JPZS01000048 Synergistota Synergistes jonesii [JPZS] 17566 17490 - Arg TCT [ENA] ¡û
>W1710631829 JQEK01000023 Synergistota Synergistes jonesii [JQEK] 17567 17491 - Arg TCT [ENA] ¡û
>W1710631894 JQEL01000049 Synergistota Synergistes jonesii [JQEL] 17567 17491 - Arg TCT [ENA] ¡û
Identical group No.306791 (2 seq.)
>W1711629553 MPPC01000010 Synergistota Aminobacterium sp. EBM-42 [MPPC] 237261 237337 + Arg TCT [ENA] ¡û
>C10100331 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 986631 986555 - Arg TCT [Ensembl] ¡û
Identical group No.318588 (3 seq.)
>WENV170676921 LDZS01003200 [LDZS] terrestrial metagenome; oil reservoir sample K3 21404 21328 - Arg TCT [ENA] ¢þ
>W1610613289 LGFQ01000020 Synergistota Synergistales bacterium 54_24 [LGFQ] 21404 21328 - Arg TCT [ENA] ¡û
>W1710734496 LGFQ01000020 Synergistota Synergistales bacterium 54_24 [LGFQ] 21404 21328 - Arg TCT [ENA] ¡û
Identical group No.318592 (4 seq.)
>WENV170676975 LDZS01003840 [LDZS] terrestrial metagenome; oil reservoir sample K3 7489 7413 - Arg TCT [ENA] ¢þ
>C121005706 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1131060 1130984 - Arg TCT [Ensembl] ¡û
>W1610613337 LGFS01000002 Synergistota Thermovirga lienii [LGFS] 7489 7413 - Arg TCT [ENA] ¡û
>W1710734544 LGFS01000002 Synergistota Thermovirga lienii [LGFS] 7489 7413 - Arg TCT [ENA] ¡û
Identical group No.330345 (4 seq.)
>WENV181908455 OGYB01000037 [OGYB] human gut metagenome; faeces 46144 46220 + Arg TCT [ENA] ¢þ
>WENV182172334 OHMY01002713 [OHMY] human gut metagenome; feces 638 714 + Arg TCT [ENA] ¢þ
>W141452044 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 518149 518073 - Arg TCT [ENA] ¡û
>W121000490 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 92759 92835 + Arg TCT [ENA] ¡û
Identical group No.342457 (11 seq.)
>WENV180731938 ODGW01041905 [ODGW] human metagenome; G_DNA_Supragingival plaque 380 304 - Arg TCT [ENA] ¢þ
>WENV180751849 ODHS01207578 [ODHS] human metagenome; G_DNA_Supragingival plaque 157 233 + Arg TCT [ENA] ¢þ
>WENV180797795 ODJB01125366 [ODJB] human metagenome; G_DNA_Supragingival plaque 149 73 - Arg TCT [ENA] ¢þ
>WENV180809809 ODJK01050682 [ODJK] human metagenome; G_DNA_Subgingival plaque 385 461 + Arg TCT [ENA] ¢þ
>WENV180945291 ODUC01104496 [ODUC] human metagenome; G_DNA_Supragingival plaque 450 526 + Arg TCT [ENA] ¢þ
>WENV180982154 ODVE01174101 [ODVE] human metagenome; G_DNA_Supragingival plaque 61 137 + Arg TCT [ENA] ¢þ
>WENV181050869 ODYD01078804 [ODYD] human metagenome; G_DNA_Supragingival plaque 380 304 - Arg TCT [ENA] ¢þ
>WENV181076687 OEAP01010568 [OEAP] human metagenome; G_DNA_Supragingival plaque 2747 2671 - Arg TCT [ENA] ¢þ
>WENV181081188 OEAS01144434 [OEAS] human metagenome; G_DNA_Supragingival plaque 430 354 - Arg TCT [ENA] ¢þ
>WENV183715237 PDWI01229204 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 664 588 - Arg TCT [ENA] ¢þ
>C161104042 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1116736 1116660 - Arg TCT - ¡û
Identical group No.352331 (4 seq.)
>W1711744493 MUHX01000010 Synergistota Pyramidobacter sp. C12-8 [MUHX] 58718 58794 + Arg TCT [ENA] ¡û
>WENV183763965 PPYE01311358 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 29022 29098 + Arg TCT [ENA] ¢þ
>W10113012 ADFP01000008 Synergistota Pyramidobacter piscolens W5455 [ADFP] 333 409 + Arg TCT [ENA] ¡û
>W11116239 ADFP01000008 Synergistota Pyramidobacter piscolens W5455 [ADFP] 333 409 + Arg TCT [ENA] ¡û
Identical group No.352498 (1 seq.)
>W11138610 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 83285 83361 + Arg TCT [ENA] ¡û
Identical group No.363956 (3 seq.)
>W141146863 AWWC01000020 Synergistota Jonquetella sp. BV3C21 [AWWC] 15017 15093 + Arg TCT [ENA] ¡û
>W09132972 ACOO02000025 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 14199 14275 + Arg TCT [ENA] ¡û
>W121017495 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 310760 310836 + Arg TCT [ENA] ¡û
Identical group No.376716 (10 seq.)
>W1711137628 LVBQ01000072 Synergistota Synergistales bacterium Syner_03 [LVBQ] 80 4 - Arg TCT [ENA] ¡û
>C171050544 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1887153 1887229 + Arg TCT - ¡û
>WENV180274755 OBHE01033770 [OBHE] human gut metagenome; human gut 21 97 + Arg TCT [ENA] ¢þ
>WENV180544557 OCIQ01033914 [OCIQ] human gut metagenome; human gut 366 290 - Arg TCT [ENA] ¢þ
>WENV181312121 OFJB01045396 [OFJB] sludge metagenome; sludge 672 748 + Arg TCT [ENA] ¢þ
>WENV181915882 OGYF01023162 [OGYF] human gut metagenome; faeces 580 504 - Arg TCT [ENA] ¢þ
>WENV182031328 OHCS01010137 [OHCS] human gut metagenome; feces 463 387 - Arg TCT [ENA] ¢þ
>WENV182212671 OHQG01003305 [OHQG] human gut metagenome; feces 463 387 - Arg TCT [ENA] ¢þ
>WENV170656547 JTFO01024204 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 267 191 - Arg TCT [ENA] ¢þ
>W1610948748 LVBQ01000072 Synergistota Synergistales bacterium Syner_03 [LVBQ] 80 4 - Arg TCT [ENA] ¡û
Identical group No.406120 (3 seq.)
>WENV170656380 JTFO01011938 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 522 446 - Arg TCT [ENA] ¢þ
>W09108914 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 123053 123129 + Arg TCT [ENA] ¡û
>W1710608681 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 100714 100638 - Arg TCT [ENA] ¡û
Identical group No.417199 (1 seq.)
>W121031631 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 865741 865817 + Arg TCT [ENA] ¡û
Identical group No.424045 (3 seq.)
>WENV181409408 OGCI01000159 [OGCI] hot springs metagenome; Hot spring water 38726 38650 - Arg TCT [ENA] ¢þ
>W09110135 ABUW01000004 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 75913 75989 + Arg TCT [ENA] ¡û
>C10112979 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 879534 879610 + Arg TCT [Ensembl] ¡û
Identical group No.430981 (1 seq.)
>W141278956 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 428126 428202 + Arg TCT [ENA] ¡û
Identical group No.441661 (1 seq.)
>W141279000 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 1222865 1222941 + Arg TCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK