tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = TTC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.461196 (12 seq.)
>WENV180098788 MTBK01266929 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 392 317 - Glu TTC [ENA] ¢þ
>WENV183516138 OMKS01135633 [OMKS] sediment metagenome; hot spring sediment 491 566 + Glu TTC [ENA] ¢þ
>WENV170677166 LDZT01003279 [LDZT] terrestrial metagenome; oil reservoir sample SB1 10442 10517 + Glu TTC [ENA] ¢þ
>WENV170679060 LDZU01006864 [LDZU] terrestrial metagenome; oil reservoir sample SB2 1364 1439 + Glu TTC [ENA] ¢þ
>WENV170967330 MTKW01000919 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2258 2183 - Glu TTC [ENA] ¢þ
>WENV170972035 MTKX01018347 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 49190 49265 + Glu TTC [ENA] ¢þ
>WENV170974573 MTKY01066083 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 13082 13157 + Glu TTC [ENA] ¢þ
>WENV170976298 MTKZ01006422 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 54501 54426 - Glu TTC [ENA] ¢þ
>W1610613627 LGGB01000031 Synergistota Synergistales bacterium 53_16 [LGGB] 10442 10517 + Glu TTC [ENA] ¡û
>W1610614507 LGHG01000115 Synergistota Synergistales bacterium 54_9 [LGHG] 1364 1439 + Glu TTC [ENA] ¡û
>W1710734799 LGGB01000031 Synergistota Synergistales bacterium 53_16 [LGGB] 10442 10517 + Glu TTC [ENA] ¡û
>W1710735488 LGHG01000115 Synergistota Synergistales bacterium 54_9 [LGHG] 1364 1439 + Glu TTC [ENA] ¡û
Identical group No.473791 (12 seq.)
>C171050559 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 2015844 2015769 - Glu TTC - ¡û
>WENV181908729 OGYB01000435 [OGYB] human gut metagenome; faeces 5583 5508 - Glu TTC [ENA] ¢þ
>WENV181914566 OGYF01000443 [OGYF] human gut metagenome; faeces 42882 42807 - Glu TTC [ENA] ¢þ
>WENV182031366 OHCS01012525 [OHCS] human gut metagenome; feces 534 459 - Glu TTC [ENA] ¢þ
>WENV182180765 OHNO01012273 [OHNO] human gut metagenome; feces 1402 1477 + Glu TTC [ENA] ¢þ
>WENV182212967 OHQG01023391 [OHQG] human gut metagenome; feces 489 414 - Glu TTC [ENA] ¢þ
>WENV182215827 OHQM01003687 [OHQM] human gut metagenome; feces 4242 4167 - Glu TTC [ENA] ¢þ
>WENV182537864 OIXH01022119 [OIXH] human gut metagenome; faeces 1024 1099 + Glu TTC [ENA] ¢þ
>WENV182883535 OKSB01014532 [OKSB] human gut metagenome; faeces 515 440 - Glu TTC [ENA] ¢þ
>WENV183039693 OLGB01012493 [OLGB] human gut metagenome; faeces 204 279 + Glu TTC [ENA] ¢þ
>W141452040 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 628737 628662 - Glu TTC [ENA] ¡û
>W121000496 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 196074 195999 - Glu TTC [ENA] ¡û
Identical group No.486066 (5 seq.)
>WENV170564065 CZCB01045918 [CZCB] anaerobic digester metagenome; anaerobic digester 166 91 - Glu TTC [ENA] ¢þ
>W09126623 ACJX01000170 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 93535 93460 - Glu TTC [ENA] ¡û
>C121008053 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 288344 288419 + Glu TTC [Ensembl] ¡û
>W1710530843 FNPD01000010 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 486 561 + Glu TTC [ENA] ¡û
>W1710594082 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 787591 787516 - Glu TTC [ENA] ¡û
Identical group No.488002 (2 seq.)
>W1712039387 NFJQ01000011 Synergistota Cloacibacillus sp. An23 [NFJQ] 58734 58809 + Glu TTC [ENA] ¡û
>WENV181865519 OGWU01035688 [OGWU] human gut metagenome; faeces 546 621 + Glu TTC [ENA] ¢þ
Identical group No.490525 (4 seq.)
>W1711629575 MPPC01000025 Synergistota Aminobacterium sp. EBM-42 [MPPC] 124395 124320 - Glu TTC [ENA] ¡û
>W141278988 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 673261 673336 + Glu TTC [ENA] ¡û
>WENV170719906 LSQX01133135 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 61856 61781 - Glu TTC [ENA] ¢þ
>C10100319 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 1544106 1544031 - Glu TTC [Ensembl] ¡û
Identical group No.491403 (6 seq.)
>W141701215 JMKI01000047 Synergistota Synergistes jonesii [JMKI] 9545 9620 + Glu TTC [ENA] ¡û
>W1710629256 JPZQ01000056 Synergistota Synergistes jonesii [JPZQ] 8715 8790 + Glu TTC [ENA] ¡û
>W1710629300 JPZR01000046 Synergistota Synergistes jonesii [JPZR] 8717 8792 + Glu TTC [ENA] ¡û
>W1710629342 JPZS01000048 Synergistota Synergistes jonesii [JPZS] 8715 8790 + Glu TTC [ENA] ¡û
>W1710631825 JQEK01000023 Synergistota Synergistes jonesii [JQEK] 8715 8790 + Glu TTC [ENA] ¡û
>W1710631890 JQEL01000049 Synergistota Synergistes jonesii [JQEL] 8715 8790 + Glu TTC [ENA] ¡û
Identical group No.504036 (4 seq.)
>WENV170676916 LDZS01003199 [LDZS] terrestrial metagenome; oil reservoir sample K3 1206 1281 + Glu TTC [ENA] ¢þ
>W11138591 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 971477 971552 + Glu TTC [ENA] ¡û
>W1610613284 LGFQ01000019 Synergistota Synergistales bacterium 54_24 [LGFQ] 1206 1281 + Glu TTC [ENA] ¡û
>W1710734491 LGFQ01000019 Synergistota Synergistales bacterium 54_24 [LGFQ] 1206 1281 + Glu TTC [ENA] ¡û
Identical group No.504092 (7 seq.)
>W141278953 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 157037 157112 + Glu TTC [ENA] ¡û
>WENV170678359 LDZT01014042 [LDZT] terrestrial metagenome; oil reservoir sample SB1 7875 7950 + Glu TTC [ENA] ¢þ
>WENV170678636 LDZU01003517 [LDZU] terrestrial metagenome; oil reservoir sample SB2 140 215 + Glu TTC [ENA] ¢þ
>W1610613711 LGGE01000035 Synergistota Synergistales bacterium 57_84 [LGGE] 7875 7950 + Glu TTC [ENA] ¡û
>W1610614174 LGGV01000142 Synergistota Synergistales bacterium 58_81 [LGGV] 140 215 + Glu TTC [ENA] ¡û
>W1710734864 LGGE01000035 Synergistota Synergistales bacterium 57_84 [LGGE] 7875 7950 + Glu TTC [ENA] ¡û
>W1710735257 LGGV01000142 Synergistota Synergistales bacterium 58_81 [LGGV] 140 215 + Glu TTC [ENA] ¡û
Identical group No.538078 (1 seq.)
>C161104056 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 260308 260233 - Glu TTC - ¡û
Identical group No.541208 (7 seq.)
>W1711744507 MUHX01000026 Synergistota Pyramidobacter sp. C12-8 [MUHX] 23286 23361 + Glu TTC [ENA] ¡û
>WENV181638960 OGNC01044921 [OGNC] metagenome; Human gut stool 379 304 - Glu TTC [ENA] ¢þ
>WENV181973387 OHAA01037263 [OHAA] human gut metagenome; faeces 11 86 + Glu TTC [ENA] ¢þ
>WENV181988779 OHAO01000524 [OHAO] human gut metagenome; faeces 8550 8625 + Glu TTC [ENA] ¢þ
>WENV183763934 PPYE01311247 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 37512 37587 + Glu TTC [ENA] ¢þ
>W10113021 ADFP01000047 Synergistota Pyramidobacter piscolens W5455 [ADFP] 95691 95616 - Glu TTC [ENA] ¡û
>W11116248 ADFP01000047 Synergistota Pyramidobacter piscolens W5455 [ADFP] 95691 95616 - Glu TTC [ENA] ¡û
Identical group No.551485 (6 seq.)
>W1711137562 LVBO01000193 Synergistota Synergistales bacterium Syner_01 [LVBO] 10352 10427 + Glu TTC [ENA] ¡û
>W1711137595 LVBP01000232 Synergistota Synergistales bacterium Syner_02 [LVBP] 173 248 + Glu TTC [ENA] ¡û
>WENV170658299 JTFP01083302 [JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater 149 74 - Glu TTC [ENA] ¢þ
>WENV170686423 LFRM01143735 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 890 815 - Glu TTC [ENA] ¢þ
>W1610948682 LVBO01000193 Synergistota Synergistales bacterium Syner_01 [LVBO] 10352 10427 + Glu TTC [ENA] ¡û
>W1610948715 LVBP01000232 Synergistota Synergistales bacterium Syner_02 [LVBP] 173 248 + Glu TTC [ENA] ¡û
Identical group No.553417 (3 seq.)
>W141146872 AWWC01000024 Synergistota Jonquetella sp. BV3C21 [AWWC] 22070 22145 + Glu TTC [ENA] ¡û
>W09132979 ACOO02000027 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 68344 68269 - Glu TTC [ENA] ¡û
>W121017501 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 480930 480855 - Glu TTC [ENA] ¡û
Identical group No.568337 (4 seq.)
>W1711137630 LVBQ01000074 Synergistota Synergistales bacterium Syner_03 [LVBQ] 249 174 - Glu TTC [ENA] ¡û
>WENV181312248 OFJB01062648 [OFJB] sludge metagenome; sludge 130 55 - Glu TTC [ENA] ¢þ
>WENV170978500 MTKZ01052005 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 223 148 - Glu TTC [ENA] ¢þ
>W1610948750 LVBQ01000074 Synergistota Synergistales bacterium Syner_03 [LVBQ] 249 174 - Glu TTC [ENA] ¡û
Identical group No.601770 (2 seq.)
>WENV170657139 JTFO01090814 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 440 365 - Glu TTC [ENA] ¢þ
>W1710608698 FXBB01000014 Synergistota Dethiosulfovibrio salsuginis [FXBB] 30787 30862 + Glu TTC [ENA] ¡û
Identical group No.614289 (4 seq.)
>WENV181409289 OGCI01000066 [OGCI] hot springs metagenome; Hot spring water 24784 24709 - Glu TTC [ENA] ¢þ
>W09110122 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 230665 230740 + Glu TTC [ENA] ¡û
>C10113006 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1353383 1353308 - Glu TTC [Ensembl] ¡û
>W121031619 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 503252 503327 + Glu TTC [ENA] ¡û
Identical group No.621940 (2 seq.)
>WENV183717986 PDWJ01002112 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1548 1473 - Glu TTC [ENA] ¢þ
>W09108901 ABTR01000001 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 248312 248237 - Glu TTC [ENA] ¡û
Identical group No.641544 (1 seq.)
>C121005677 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 579860 579935 + Glu TTC [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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