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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170378473
CETV01023894
281633
Actinomycetota
CCA
Trp
>WENV170378562
CETV01029208
209510
Actinomycetota
GAT
Ile
>WENV170378688
CETV01040751
286398
Actinomycetota
GTT
Asn
>WENV170378689
CETV01040751
202993
Actinomycetota
CAT
Met
>WENV170378735
CETV01043798
57288
Actinomycetota
TGA
Ser
>WENV170378742
CETV01045024
302020
Actinomycetota
CCG
Arg
>WENV170378952
CETV01068507
281633
Actinomycetota
CCA
Trp
>WENV170378998
CETV01077392
20383
Actinomycetota
CGA
Ser
>WENV170379115
CETV01091734
57196
Actinomycetota
GAG
Leu
>WENV170379131
CETV01092870
285876
Actinomycetota
CGT
Thr
>WENV170379189
CETV01101308
313796
Actinomycetota
ACG
Arg
>WENV170379204
CETV01102469
486372
Actinomycetota
GCA
Cys
>WENV170379368
CETV01120897
417479
Actinomycetota
CCT
Arg
>WENV170379402
CETV01125100
118175
Actinomycetota
GTA
Tyr
>WENV170379404
CETV01125100
181905
Actinomycetota
CAT
Met
>WENV170379487
CETV01132337
286927
Actinomycetota
TCT
Arg
>WENV170379582
CETV01138283
177601
Actinomycetota
CAT
Met
>WENV170379743
CETV01204487
198609
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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