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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180000048
CZKA01000074
501913
Actinomycetota
GCA
Cys
>WENV180000016
CZKA01000015
195667
Actinomycetota
GAT
Ile
>WENV180000032
CZKA01000029
281033
Actinomycetota
CTC
Glu
>WENV180000014
CZKA01000013
74688
Actinomycetota
CAG
Leu
>WENV180000018
CZKA01000016
150409
Actinomycetota
TTG
Gln
>WENV180000054
CZKA01000078
328473
Actinomycetota
CGT
Thr
>WENV180000028
CZKA01000022
313796
Actinomycetota
ACG
Arg
>WENV180000044
CZKA01000066
317597
Actinomycetota
CTT
Lys
>WENV180000049
CZKA01000074
466038
Actinomycetota
GAC
Val
>WENV180000030
CZKA01000025
406658
Actinomycetota
CCG
Arg
>WENV180000034
CZKA01000037
227514
Actinomycetota
CAT
Met
>WENV180000037
CZKA01000040
301037
Actinomycetota
CGC
Ala
>WENV180000047
CZKA01000074
283059
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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