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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170565569
FJVZ01000239
406658
Actinomycetota
CCG
Arg
>WENV170565570
FJVZ01000321
293206
Actinomycetota
GGT
Thr
>WENV170565571
FJVZ01000337
178511
Actinomycetota
TGT
Thr
>WENV170565573
FJVZ01000389
281115
Actinomycetota
>WENV170565574
FJVZ01000389
281115
Actinomycetota
>WENV170565575
FJVZ01000463
317611
Actinomycetota
TTC
Glu
>WENV170565576
FJVZ01000463
183945
Actinomycetota
GTC
Asp
>WENV170565577
FJVZ01000463
209301
Actinomycetota
GAA
Phe
>WENV170565578
FJVZ01000484
200202
Actinomycetota
CTT
Lys
>WENV170565582
FJVZ01000647
399113
Actinomycetota
GAC
Val
>WENV170565584
FJVZ01000650
293206
Actinomycetota
GGT
Thr
>WENV170565585
FJVZ01000650
290573
Actinomycetota
CAT
Met
>WENV170565587
FJVZ01000652
183945
Actinomycetota
GTC
Asp
>WENV170565591
FJVZ01000753
406658
Actinomycetota
CCG
Arg
>WENV170565592
FJVZ01000774
221022
Actinomycetota
CAT
Met
>WENV170565593
FJVZ01000816
281001
Actinomycetota
GTG
His
>WENV170565594
FJVZ01000827
221022
Actinomycetota
CAT
Met
>WENV170565596
FJVZ01000834
221022
Actinomycetota
CAT
Met
>WENV170565597
FJVZ01000851
5755
Actinomycetota
GCT
Ser
>WENV170565598
FJVZ01000851
289100
Actinomycetota
ACG
Arg
>WENV170565599
FJVZ01000851
289100
Actinomycetota
ACG
Arg
>WENV170565601
FJVZ01000873
200202
Actinomycetota
CTT
Lys
>WENV170565602
FJVZ01000875
200202
Actinomycetota
CTT
Lys
>WENV170565605
FJVZ01000948
195667
Actinomycetota
GAT
Ile
>WENV170565607
FJVZ01000992
73094
Actinomycetota
CAG
Leu
>WENV170565610
FJVZ01001055
221022
Actinomycetota
CAT
Met
>WENV170565615
FJVZ01001116
221022
Actinomycetota
CAT
Met
>WENV170565618
FJVZ01001202
480460
Actinomycetota
GCA
Cys
>WENV170565619
FJVZ01001202
399113
Actinomycetota
GAC
Val
>WENV170565620
FJVZ01001202
399113
Actinomycetota
GAC
Val
>WENV170565622
FJVZ01001264
56125
Actinomycetota
GGA
Ser
>WENV170565624
FJVZ01001284
183946
Actinomycetota
TGG
Pro
>WENV170565625
FJVZ01001315
56126
Actinomycetota
GAG
Leu
>WENV170565626
FJVZ01001339
179086
Actinomycetota
CGC
Ala
>WENV170565627
FJVZ01001414
56126
Actinomycetota
GAG
Leu
>WENV170565628
FJVZ01001451
179086
Actinomycetota
CGC
Ala
>WENV170565631
FJVZ01001483
399126
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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