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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170572426
FLOH01000850
190929
Actinomycetota
GTC
Asp
>WENV170572934
FLOH01001536
190929
Actinomycetota
GTC
Asp
>WENV170571902
FLOH01000366
31652
Actinomycetota
CGA
Ser
>WENV170570419
FLOH01000004
189770
Actinomycetota
GAA
Phe
>WENV170571827
FLOH01000328
202993
Actinomycetota
CAT
Met
>WENV170570988
FLOH01000048
491020
Actinomycetota
GCA
Cys
>WENV170570771
FLOH01000022
177601
Actinomycetota
CAT
Met
>WENV170571401
FLOH01000149
177601
Actinomycetota
CAT
Met
>WENV170570428
FLOH01000004
119438
Actinomycetota
GTA
Tyr
>WENV170572224
FLOH01000635
119438
Actinomycetota
GTA
Tyr
>WENV170571901
FLOH01000366
281498
Actinomycetota
ACG
Arg
>WENV170571077
FLOH01000065
405556
Actinomycetota
CTG
Gln
>WENV170571898
FLOH01000366
405556
Actinomycetota
CTG
Gln
>WENV170572291
FLOH01000704
405556
Actinomycetota
CTG
Gln
>WENV170571187
FLOH01000088
191257
Actinomycetota
CGG
Pro
>WENV170571688
FLOH01000269
191257
Actinomycetota
CGG
Pro
>WENV170572831
FLOH01001362
480591
Actinomycetota
CCC
Gly
>WENV170571078
FLOH01000065
298505
Actinomycetota
CTC
Glu
>WENV170571899
FLOH01000366
298505
Actinomycetota
CTC
Glu
>WENV170572292
FLOH01000704
298505
Actinomycetota
CTC
Glu
>WENV170570448
FLOH01000004
407933
Actinomycetota
GAC
Val
>WENV170572618
FLOH01001029
407933
Actinomycetota
GAC
Val
>WENV170572810
FLOH01001317
58234
Actinomycetota
GGA
Ser
>WENV170571705
FLOH01000273
480460
Actinomycetota
GCA
Cys
>WENV170572007
FLOH01000443
482586
Actinomycetota
GCA
Cys
>WENV170572617
FLOH01001029
482586
Actinomycetota
GCA
Cys
>WENV170570417
FLOH01000004
289635
Actinomycetota
TTC
Glu
>WENV170570756
FLOH01000020
317626
Actinomycetota
GGC
Ala
>WENV170571825
FLOH01000328
317626
Actinomycetota
GGC
Ala
>WENV170570996
FLOH01000049
313796
Actinomycetota
ACG
Arg
>WENV170571575
FLOH01000207
313796
Actinomycetota
ACG
Arg
>WENV170571998
FLOH01000439
289686
Actinomycetota
GTG
His
>WENV170570443
FLOH01000004
420962
Actinomycetota
TAC
Val
>WENV170572791
FLOH01001299
420962
Actinomycetota
TAC
Val
>WENV170570410
FLOH01000004
481421
Actinomycetota
TCC
Gly
>WENV170571099
FLOH01000071
481421
Actinomycetota
TCC
Gly
>WENV170571863
FLOH01000347
481421
Actinomycetota
TCC
Gly
>WENV170571940
FLOH01000400
481421
Actinomycetota
TCC
Gly
>WENV170571996
FLOH01000439
481421
Actinomycetota
TCC
Gly
>WENV170572410
FLOH01000827
481421
Actinomycetota
TCC
Gly
>WENV170572900
FLOH01001476
481421
Actinomycetota
TCC
Gly
>WENV170570987
FLOH01000048
281008
Actinomycetota
GCC
Gly
>WENV170571704
FLOH01000273
281008
Actinomycetota
GCC
Gly
>WENV170572858
FLOH01001439
281008
Actinomycetota
GCC
Gly
>WENV170570446
FLOH01000004
287577
Actinomycetota
GCC
Gly
>WENV170572006
FLOH01000443
287577
Actinomycetota
GCC
Gly
>WENV170570774
FLOH01000022
480761
Actinomycetota
GCA
Cys
>WENV170572294
FLOH01000710
480761
Actinomycetota
GCA
Cys
>WENV170572759
FLOH01001264
399218
Actinomycetota
TGT
Thr
>WENV170571076
FLOH01000065
200581
Actinomycetota
CAT
Met
>WENV170571628
FLOH01000239
200581
Actinomycetota
CAT
Met
>WENV170572067
FLOH01000508
200581
Actinomycetota
CAT
Met
>WENV170572939
FLOH01001544
200581
Actinomycetota
CAT
Met
>WENV170572720
FLOH01001211
150331
Actinomycetota
TAG
Leu
>WENV170570441
FLOH01000004
192019
Actinomycetota
CAT
Met
>WENV170572227
FLOH01000635
184461
Actinomycetota
CCA
Trp
>WENV170572611
FLOH01001021
184461
Actinomycetota
CCA
Trp
>WENV170572616
FLOH01001029
294850
Actinomycetota
GCC
Gly
>WENV170571747
FLOH01000288
294908
Actinomycetota
CCT
Arg
>WENV170572000
FLOH01000439
407330
Actinomycetota
CCG
Arg
>WENV170572252
FLOH01000659
182527
Actinomycetota
GGG
Pro
>WENV170571930
FLOH01000390
404049
Actinomycetota
GTT
Asn
>WENV170571979
FLOH01000428
404049
Actinomycetota
GTT
Asn
>WENV170572706
FLOH01001190
315779
Actinomycetota
GGC
Ala
>WENV170570425
FLOH01000004
101026
Actinomycetota
TGA
Ser
>WENV170572725
FLOH01001229
101026
Actinomycetota
TGA
Ser
>WENV170571389
FLOH01000146
417479
Actinomycetota
CCT
Arg
>WENV170572226
FLOH01000635
184462
Actinomycetota
CAT
Met
>WENV170572610
FLOH01001021
184462
Actinomycetota
CAT
Met
>WENV170570738
FLOH01000020
56310
Actinomycetota
GGA
Ser
>WENV170572808
FLOH01001317
307128
Actinomycetota
CCA
Trp
>WENV170570753
FLOH01000020
307128
Actinomycetota
CCA
Trp
>WENV170572707
FLOH01001190
189000
Actinomycetota
CAT
Met
>WENV170571748
FLOH01000288
294834
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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