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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183500590
OMGQ01036617
176499
Actinomycetota
CAT
Met
>WENV183500370
OMGQ01008473
14009
Actinomycetota
GGA
Ser
>WENV183500547
OMGQ01028535
280498
Actinomycetota
GTT
Asn
>WENV183500442
OMGQ01015039
176639
Actinomycetota
CGG
Pro
>WENV183500250
OMGQ01004740
176641
Actinomycetota
CTT
Lys
>WENV183500329
OMGQ01006929
349164
Actinomycetota
CTC
Glu
>WENV183500373
OMGQ01008549
117881
Actinomycetota
TAG
Leu
>WENV183500441
OMGQ01014836
56152
Actinomycetota
TGA
Ser
>WENV183500249
OMGQ01004738
281239
Actinomycetota
TTT
Lys
>WENV183500466
OMGQ01017095
56153
Actinomycetota
GGA
Ser
>WENV183500310
OMGQ01006293
20205
Actinomycetota
GCT
Ser
>WENV183500069
OMGQ01001429
480329
Actinomycetota
CCC
Gly
>WENV183500511
OMGQ01021845
175882
Actinomycetota
TGG
Pro
>WENV183500268
OMGQ01005044
281240
Actinomycetota
CCT
Arg
>WENV183500609
OMGQ01045119
99916
Actinomycetota
CAG
Leu
>WENV183500330
OMGQ01006929
398853
Actinomycetota
CTG
Gln
>WENV183500505
OMGQ01021187
176642
Actinomycetota
CAA
Leu
>WENV183500589
OMGQ01036617
117903
Actinomycetota
GTA
Tyr
>WENV183500372
OMGQ01008549
280470
Actinomycetota
CGT
Thr
>WENV183500465
OMGQ01017063
482493
Actinomycetota
CCC
Gly
>WENV183500454
OMGQ01016297
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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