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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183549623
OOAZ01004914
235146
Actinomycetota
CGT
Thr
>WENV183549753
OOAZ01011352
235347
Actinomycetota
GGC
Ala
>WENV183549708
OOAZ01008459
166493
Actinomycetota
CTT
Lys
>WENV183549615
OOAZ01004706
144589
Actinomycetota
ACG
Arg
>WENV183549616
OOAZ01004748
37070
Actinomycetota
CGA
Ser
>WENV183549597
OOAZ01004124
273786
Actinomycetota
CGT
Thr
>WENV183549826
OOAZ01021061
411601
Actinomycetota
CCC
Gly
>WENV183549727
OOAZ01009706
162208
Actinomycetota
TAC
Val
>WENV183549639
OOAZ01005554
235174
Actinomycetota
TGC
Ala
>WENV183549724
OOAZ01009431
235101
Actinomycetota
TTT
Lys
>WENV183549771
OOAZ01012935
121510
Actinomycetota
TAA
Leu
>WENV183549629
OOAZ01004950
356045
Actinomycetota
GAC
Val
>WENV183549630
OOAZ01004950
235199
Actinomycetota
CAC
Val
>WENV183549601
OOAZ01004217
44862
Actinomycetota
CGA
Ser
>WENV183549654
OOAZ01006004
254857
Actinomycetota
CCG
Arg
>WENV183549656
OOAZ01006191
144700
Actinomycetota
CAT
Met
>WENV183549571
OOAZ01003079
243671
Actinomycetota
CTC
Glu
>WENV183549572
OOAZ01003079
338148
Actinomycetota
CTG
Gln
>WENV183549733
OOAZ01009965
235148
Actinomycetota
GTT
Asn
>WENV183549175
OOAZ01000187
338238
Actinomycetota
CCA
Trp
>WENV183549707
OOAZ01008422
176456
Actinomycetota
TCT
Arg
>WENV183549840
OOAZ01023490
144825
Actinomycetota
CAT
Met
>WENV183549652
OOAZ01005908
145347
Actinomycetota
CAA
Leu
>WENV183549668
OOAZ01006748
16467
Actinomycetota
GCT
Ser
>WENV183549633
OOAZ01005096
411554
Actinomycetota
CCC
Gly
>WENV183549598
OOAZ01004124
113601
Actinomycetota
TAG
Leu
>WENV183549780
OOAZ01014172
144595
Actinomycetota
CAA
Leu
>WENV183549874
OOAZ01033020
145343
Actinomycetota
GGG
Pro
>WENV183549660
OOAZ01006358
235149
Actinomycetota
CCT
Arg
>WENV183549798
OOAZ01016715
235121
Actinomycetota
CGT
Thr
>WENV183549607
OOAZ01004529
119485
Actinomycetota
TAA
Leu
>WENV183549560
OOAZ01002929
80622
Actinomycetota
CAG
Leu
>WENV183549870
OOAZ01030419
16222
Actinomycetota
GAG
Leu
>WENV183549604
OOAZ01004364
235173
Actinomycetota
GGC
Ala
>WENV183549929
OOAZ01052279
243162
Actinomycetota
GTT
Asn
>WENV183549503
OOAZ01001880
278447
Actinomycetota
GTG
His
>WENV183549655
OOAZ01006191
95593
Actinomycetota
>WENV183549749
OOAZ01010947
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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