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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183564548
OOBY01036107
267574
Actinomycetota
CAC
Val
>WENV183564536
OOBY01032558
254857
Actinomycetota
CCG
Arg
>WENV183564535
OOBY01032177
235149
Actinomycetota
CCT
Arg
>WENV183564443
OOBY01014191
37070
Actinomycetota
CGA
Ser
>WENV183564399
OOBY01007412
338148
Actinomycetota
CTG
Gln
>WENV183564547
OOBY01036107
356045
Actinomycetota
GAC
Val
>WENV183564483
OOBY01019332
16467
Actinomycetota
GCT
Ser
>WENV183564405
OOBY01008060
53078
Actinomycetota
GGA
Ser
>WENV183564400
OOBY01007556
98279
Actinomycetota
GTA
Tyr
>WENV183564478
OOBY01018254
119485
Actinomycetota
TAA
Leu
>WENV183564487
OOBY01021327
198659
Actinomycetota
TAC
Val
>WENV183564447
OOBY01015508
235174
Actinomycetota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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