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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183571257
OOCE01000315
235153
Actinomycetota
CCT
Arg
>WENV183571452
OOCE01003136
144589
Actinomycetota
ACG
Arg
>WENV183571236
OOCE01000194
37070
Actinomycetota
CGA
Ser
>WENV183571616
OOCE01019179
235174
Actinomycetota
TGC
Ala
>WENV183571382
OOCE01001636
145423
Actinomycetota
TCT
Arg
>WENV183571274
OOCE01000429
254857
Actinomycetota
CCG
Arg
>WENV183571426
OOCE01002274
144636
Actinomycetota
GAT
Ile
>WENV183571476
OOCE01004258
98279
Actinomycetota
GTA
Tyr
>WENV183571450
OOCE01003100
338148
Actinomycetota
CTG
Gln
>WENV183571396
OOCE01001831
113601
Actinomycetota
TAG
Leu
>WENV183571725
OOCE01039860
414234
Actinomycetota
CTG
Gln
>WENV183571614
OOCE01019145
91808
Actinomycetota
CAG
Leu
>WENV183571395
OOCE01001831
235121
Actinomycetota
CGT
Thr
>WENV183571679
OOCE01031283
47164
Actinomycetota
GGA
Ser
>WENV183571741
OOCE01042842
144635
Actinomycetota
TGG
Pro
>WENV183571398
OOCE01001851
119485
Actinomycetota
TAA
Leu
>WENV183571349
OOCE01001201
158513
Actinomycetota
TGG
Pro
>WENV183571617
OOCE01019179
235173
Actinomycetota
GGC
Ala
>WENV183571521
OOCE01006857
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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