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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183612282
OODU01000005
235153
Actinomycetota
CCT
Arg
>WENV183614470
OODU01085458
158720
Actinomycetota
ACG
Arg
>WENV183612423
OODU01000109
245301
Actinomycetota
GCC
Gly
>WENV183612424
OODU01000109
245301
Actinomycetota
GCC
Gly
>WENV183614318
OODU01048402
411601
Actinomycetota
CCC
Gly
>WENV183614165
OODU01030746
174149
Actinomycetota
GAT
Ile
>WENV183614166
OODU01030746
235174
Actinomycetota
TGC
Ala
>WENV183614402
OODU01061857
235101
Actinomycetota
TTT
Lys
>WENV183612292
OODU01000006
153948
Actinomycetota
GGG
Pro
>WENV183614356
OODU01053917
254857
Actinomycetota
CCG
Arg
>WENV183612280
OODU01000005
144636
Actinomycetota
GAT
Ile
>WENV183614500
OODU01102844
338148
Actinomycetota
CTG
Gln
>WENV183612986
OODU01001377
338139
Actinomycetota
GTT
Asn
>WENV183612985
OODU01001377
338139
Actinomycetota
GTT
Asn
>WENV183612984
OODU01001377
338139
Actinomycetota
GTT
Asn
>WENV183614485
OODU01091392
235348
Actinomycetota
CCT
Arg
>WENV183614325
OODU01049894
144595
Actinomycetota
CAA
Leu
>WENV183612370
OODU01000055
414234
Actinomycetota
CTG
Gln
>WENV183612362
OODU01000051
61501
Actinomycetota
CAG
Leu
>WENV183614183
OODU01031945
80622
Actinomycetota
CAG
Leu
>WENV183614449
OODU01077731
16222
Actinomycetota
GAG
Leu
>WENV183612286
OODU01000006
158513
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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