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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615707
OOEB01101422
237493
Alphaproteobacteria
CCA
Trp
>WENV183615367
OOEB01008310
25586
Alphaproteobacteria
TGA
Ser
>WENV183615734
OOEB01116274
147083
Alphaproteobacteria
GGG
Pro
>WENV183615778
OOEB01144330
199865
Alphaproteobacteria
CAT
Met
>WENV183615627
OOEB01065514
95928
Alphaproteobacteria
TAG
Leu
>WENV183615529
OOEB01033259
339846
Alphaproteobacteria
GAC
Val
>WENV183615402
OOEB01012609
147334
Alphaproteobacteria
CAT
Met
>WENV183615764
OOEB01135592
99414
Alphaproteobacteria
GTA
Tyr
>WENV183615536
OOEB01033740
192195
Alphaproteobacteria
GTC
Asp
>WENV183615299
OOEB01001535
59164
Alphaproteobacteria
GAG
Leu
>WENV183615798
OOEB01153753
412281
Alphaproteobacteria
CTG
Gln
>WENV183615488
OOEB01024759
369678
Alphaproteobacteria
GGT
Thr
>WENV183615774
OOEB01142729
377327
Alphaproteobacteria
GCC
Gly
>WENV183615695
OOEB01095799
351007
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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