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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183627804
OOGL01049565
398995
Alphaproteobacteria
CAC
Val
>WENV183627526
OOGL01009610
299509
Alphaproteobacteria
GTT
Asn
>WENV183627817
OOGL01053293
140963
Alphaproteobacteria
>WENV183627522
OOGL01009238
180022
Alphaproteobacteria
ACG
Arg
>WENV183627790
OOGL01046999
353346
Alphaproteobacteria
CAT
Met
>WENV183627948
OOGL01088714
282748
Alphaproteobacteria
CGT
Thr
>WENV183627431
OOGL01003963
78115
Alphaproteobacteria
GAG
Leu
>WENV183627772
OOGL01042867
287439
Alphaproteobacteria
CCA
Trp
>WENV183627934
OOGL01085091
32420
Alphaproteobacteria
CGA
Ser
>WENV183627767
OOGL01042030
485713
Alphaproteobacteria
CTG
Gln
>WENV183627859
OOGL01063455
29729
Alphaproteobacteria
GCT
Ser
>WENV183627376
OOGL01001628
353332
Alphaproteobacteria
CGT
Thr
>WENV183627309
OOGL01000121
400544
Alphaproteobacteria
GGT
Thr
>WENV183627338
OOGL01000613
234327
Alphaproteobacteria
GAT
Ile
>WENV183627726
OOGL01033869
398994
Alphaproteobacteria
GTT
Asn
>WENV183627854
OOGL01062427
233665
Alphaproteobacteria
CCT
Arg
>WENV183627778
OOGL01044178
413432
Alphaproteobacteria
GGT
Thr
>WENV183627302
OOGL01000061
400693
Alphaproteobacteria
GCC
Gly
>WENV183627614
OOGL01018011
406748
Alphaproteobacteria
TAC
Val
>WENV183627336
OOGL01000586
352375
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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