This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183704740
PDWI01000568
140876
Alphaproteobacteria
>WENV183712156
PDWI01090915
140876
Alphaproteobacteria
>WENV183714614
PDWI01194553
400214
Alphaproteobacteria
>WENV183706534
PDWI01004596
140932
Alphaproteobacteria
>WENV183709767
PDWI01033530
140932
Alphaproteobacteria
>WENV183710804
PDWI01053772
140932
Alphaproteobacteria
>WENV183714551
PDWI01190276
140932
Alphaproteobacteria
>WENV183704028
PDWI01000005
435083
Alphaproteobacteria
>WENV183710835
PDWI01054280
435083
Alphaproteobacteria
>WENV183711608
PDWI01074484
435083
Alphaproteobacteria
>WENV183713026
PDWI01122030
435083
Alphaproteobacteria
>WENV183713049
PDWI01122610
435083
Alphaproteobacteria
>WENV183713620
PDWI01145640
435083
Alphaproteobacteria
>WENV183713497
PDWI01141036
179639
Alphaproteobacteria
ACG
Arg
>WENV183715267
PDWI01230390
179639
Alphaproteobacteria
ACG
Arg
>WENV183704887
PDWI01000731
102490
Alphaproteobacteria
CAA
Leu
>WENV183704885
PDWI01000731
439135
Alphaproteobacteria
CAC
Val
>WENV183705375
PDWI01001458
439135
Alphaproteobacteria
CAC
Val
>WENV183706228
PDWI01003526
176146
Alphaproteobacteria
CAT
Met
>WENV183704144
PDWI01000052
180029
Alphaproteobacteria
CAT
Met
>WENV183704883
PDWI01000731
180029
Alphaproteobacteria
CAT
Met
>WENV183710848
PDWI01054591
281650
Alphaproteobacteria
CCA
Trp
>WENV183711042
PDWI01059781
281650
Alphaproteobacteria
CCA
Trp
>WENV183704731
PDWI01000557
178509
Alphaproteobacteria
CCT
Arg
>WENV183708740
PDWI01019288
178509
Alphaproteobacteria
CCT
Arg
>WENV183710996
PDWI01058256
178509
Alphaproteobacteria
CCT
Arg
>WENV183712342
PDWI01096723
178509
Alphaproteobacteria
CCT
Arg
>WENV183712904
PDWI01118248
178509
Alphaproteobacteria
CCT
Arg
>WENV183712914
PDWI01118731
178509
Alphaproteobacteria
CCT
Arg
>WENV183715115
PDWI01221825
178509
Alphaproteobacteria
CCT
Arg
>WENV183716292
PDWI01299528
178509
Alphaproteobacteria
CCT
Arg
>WENV183706229
PDWI01003526
29701
Alphaproteobacteria
CGA
Ser
>WENV183712581
PDWI01105594
29701
Alphaproteobacteria
CGA
Ser
>WENV183712388
PDWI01098285
320067
Alphaproteobacteria
CGC
Ala
>WENV183708175
PDWI01013559
282658
Alphaproteobacteria
CGT
Thr
>WENV183708959
PDWI01021858
282658
Alphaproteobacteria
CGT
Thr
>WENV183705200
PDWI01001213
283256
Alphaproteobacteria
CGT
Thr
>WENV183714657
PDWI01196385
283256
Alphaproteobacteria
CGT
Thr
>WENV183704135
PDWI01000047
284796
Alphaproteobacteria
CGT
Thr
>WENV183714665
PDWI01196951
284796
Alphaproteobacteria
CGT
Thr
>WENV183708000
PDWI01012185
305449
Alphaproteobacteria
CGT
Thr
>WENV183713921
PDWI01159246
282613
Alphaproteobacteria
CTC
Glu
>WENV183705276
PDWI01001317
399480
Alphaproteobacteria
GAA
Phe
>WENV183705352
PDWI01001424
399480
Alphaproteobacteria
GAA
Phe
>WENV183708101
PDWI01012946
399480
Alphaproteobacteria
GAA
Phe
>WENV183712957
PDWI01120013
399480
Alphaproteobacteria
GAA
Phe
>WENV183713294
PDWI01132950
399480
Alphaproteobacteria
GAA
Phe
>WENV183713977
PDWI01162063
399480
Alphaproteobacteria
GAA
Phe
>WENV183709151
PDWI01024629
432650
Alphaproteobacteria
GAA
Phe
>WENV183712725
PDWI01111612
400222
Alphaproteobacteria
GCC
Gly
>WENV183704739
PDWI01000568
428327
Alphaproteobacteria
GCC
Gly
>WENV183706533
PDWI01004596
428327
Alphaproteobacteria
GCC
Gly
>WENV183713427
PDWI01137962
398996
Alphaproteobacteria
GCC
Gly
>WENV183713428
PDWI01137962
398996
Alphaproteobacteria
GCC
Gly
>WENV183709473
PDWI01028709
400693
Alphaproteobacteria
GCC
Gly
>WENV183711776
PDWI01080038
400693
Alphaproteobacteria
GCC
Gly
>WENV183704804
PDWI01000650
29495
Alphaproteobacteria
GCT
Ser
>WENV183706074
PDWI01003042
29495
Alphaproteobacteria
GCT
Ser
>WENV183707704
PDWI01010034
29495
Alphaproteobacteria
GCT
Ser
>WENV183708481
PDWI01016612
29495
Alphaproteobacteria
GCT
Ser
>WENV183708809
PDWI01020105
29495
Alphaproteobacteria
GCT
Ser
>WENV183708911
PDWI01021348
29495
Alphaproteobacteria
GCT
Ser
>WENV183716294
PDWI01299692
29495
Alphaproteobacteria
GCT
Ser
>WENV183709859
PDWI01035516
29841
Alphaproteobacteria
GGA
Ser
>WENV183713298
PDWI01133223
29841
Alphaproteobacteria
GGA
Ser
>WENV183715506
PDWI01244267
29841
Alphaproteobacteria
GGA
Ser
>WENV183704546
PDWI01000351
29702
Alphaproteobacteria
GGA
Ser
>WENV183708673
PDWI01018608
29702
Alphaproteobacteria
GGA
Ser
>WENV183707768
PDWI01010517
282589
Alphaproteobacteria
GGC
Ala
>WENV183711451
PDWI01069970
282589
Alphaproteobacteria
GGC
Ala
>WENV183715721
PDWI01258751
282589
Alphaproteobacteria
GGC
Ala
>WENV183716172
PDWI01291808
282589
Alphaproteobacteria
GGC
Ala
>WENV183709261
PDWI01026161
283255
Alphaproteobacteria
GGC
Ala
>WENV183708394
PDWI01015614
283255
Alphaproteobacteria
GGC
Ala
>WENV183709260
PDWI01026161
283255
Alphaproteobacteria
GGC
Ala
>WENV183712187
PDWI01091561
283255
Alphaproteobacteria
GGC
Ala
>WENV183713351
PDWI01135276
283255
Alphaproteobacteria
GGC
Ala
>WENV183716007
PDWI01279519
283255
Alphaproteobacteria
GGC
Ala
>WENV183716008
PDWI01279519
283255
Alphaproteobacteria
GGC
Ala
>WENV183704547
PDWI01000351
178503
Alphaproteobacteria
GGG
Pro
>WENV183708767
PDWI01019607
178503
Alphaproteobacteria
GGG
Pro
>WENV183704241
PDWI01000110
400387
Alphaproteobacteria
GGT
Thr
>WENV183714009
PDWI01163615
400223
Alphaproteobacteria
GGT
Thr
>WENV183715830
PDWI01265841
100383
Alphaproteobacteria
GTA
Tyr
>WENV183705108
PDWI01001045
212319
Alphaproteobacteria
GTG
His
>WENV183707481
PDWI01008652
212319
Alphaproteobacteria
GTG
His
>WENV183711031
PDWI01059483
212319
Alphaproteobacteria
GTG
His
>WENV183704242
PDWI01000110
178507
Alphaproteobacteria
GTG
His
>WENV183716328
PDWI01301767
399879
Alphaproteobacteria
GTT
Asn
>WENV183704145
PDWI01000052
398994
Alphaproteobacteria
GTT
Asn
>WENV183705259
PDWI01001282
398994
Alphaproteobacteria
GTT
Asn
>WENV183707016
PDWI01006368
398994
Alphaproteobacteria
GTT
Asn
>WENV183707156
PDWI01007053
398994
Alphaproteobacteria
GTT
Asn
>WENV183709101
PDWI01023822
398994
Alphaproteobacteria
GTT
Asn
>WENV183712961
PDWI01120113
398994
Alphaproteobacteria
GTT
Asn
>WENV183713629
PDWI01146017
398994
Alphaproteobacteria
GTT
Asn
>WENV183705376
PDWI01001458
314617
Alphaproteobacteria
TAC
Val
>WENV183706461
PDWI01004343
314617
Alphaproteobacteria
TAC
Val
>WENV183715949
PDWI01276242
314617
Alphaproteobacteria
TAC
Val
>WENV183706386
PDWI01004030
281676
Alphaproteobacteria
TAC
Val
>WENV183713198
PDWI01128790
281676
Alphaproteobacteria
TAC
Val
>WENV183715259
PDWI01229938
281676
Alphaproteobacteria
TAC
Val
>WENV183707540
PDWI01008904
118213
Alphaproteobacteria
TAG
Leu
>WENV183704910
PDWI01000759
481268
Alphaproteobacteria
TCC
Gly
>WENV183706027
PDWI01002939
481268
Alphaproteobacteria
TCC
Gly
>WENV183716323
PDWI01301100
481268
Alphaproteobacteria
TCC
Gly
>WENV183704462
PDWI01000272
179386
Alphaproteobacteria
TCT
Arg
>WENV183705199
PDWI01001213
156125
Alphaproteobacteria
TCT
Arg
>WENV183715570
PDWI01248103
329227
Alphaproteobacteria
TGC
Ala
>WENV183716300
PDWI01300063
329227
Alphaproteobacteria
TGC
Ala
>WENV183707387
PDWI01008198
179768
Alphaproteobacteria
TGG
Pro
>WENV183713501
PDWI01141112
179768
Alphaproteobacteria
TGG
Pro
>WENV183708099
PDWI01012898
290029
Alphaproteobacteria
TGT
Thr
>WENV183710476
PDWI01047382
290029
Alphaproteobacteria
TGT
Thr
>WENV183711813
PDWI01081197
290029
Alphaproteobacteria
TGT
Thr
>WENV183704240
PDWI01000110
401067
Alphaproteobacteria
TTC
Glu
>WENV183705109
PDWI01001045
400384
Alphaproteobacteria
TTC
Glu
>WENV183709644
PDWI01031481
400384
Alphaproteobacteria
TTC
Glu
>WENV183712627
PDWI01107603
400384
Alphaproteobacteria
TTC
Glu
>WENV183714711
PDWI01199350
400384
Alphaproteobacteria
TTC
Glu
>WENV183716067
PDWI01283594
401037
Alphaproteobacteria
TTG
Gln
>WENV183704659
PDWI01000466
400386
Alphaproteobacteria
TTG
Gln
>WENV183710384
PDWI01045358
400386
Alphaproteobacteria
TTG
Gln
>WENV183710684
PDWI01051598
400386
Alphaproteobacteria
TTG
Gln
>WENV183710729
PDWI01052515
400386
Alphaproteobacteria
TTG
Gln
>WENV183712427
PDWI01099550
400386
Alphaproteobacteria
TTG
Gln
>WENV183705808
PDWI01002320
283257
Alphaproteobacteria
TTT
Lys
>WENV183709684
PDWI01032065
283257
Alphaproteobacteria
TTT
Lys
>WENV183714048
PDWI01165232
283257
Alphaproteobacteria
TTT
Lys
>WENV183715439
PDWI01241086
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK