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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183716409
PDWJ01000001
400387
Alphaproteobacteria
GGT
Thr
>WENV183716411
PDWJ01000001
178509
Alphaproteobacteria
CCT
Arg
>WENV183716414
PDWJ01000002
179390
Alphaproteobacteria
TGG
Pro
>WENV183716416
PDWJ01000002
118213
Alphaproteobacteria
TAG
Leu
>WENV183716417
PDWJ01000002
400384
Alphaproteobacteria
TTC
Glu
>WENV183716419
PDWJ01000002
283255
Alphaproteobacteria
GGC
Ala
>WENV183716420
PDWJ01000002
29495
Alphaproteobacteria
GCT
Ser
>WENV183716438
PDWJ01000008
178503
Alphaproteobacteria
GGG
Pro
>WENV183716476
PDWJ01000018
398994
Alphaproteobacteria
GTT
Asn
>WENV183716477
PDWJ01000020
283257
Alphaproteobacteria
TTT
Lys
>WENV183716488
PDWJ01000024
340918
Alphaproteobacteria
CGT
Thr
>WENV183716490
PDWJ01000026
29701
Alphaproteobacteria
CGA
Ser
>WENV183716491
PDWJ01000026
301916
Alphaproteobacteria
TAC
Val
>WENV183716538
PDWJ01000042
398994
Alphaproteobacteria
GTT
Asn
>WENV183716564
PDWJ01000049
435083
Alphaproteobacteria
>WENV183716584
PDWJ01000058
401067
Alphaproteobacteria
TTC
Glu
>WENV183716585
PDWJ01000058
400387
Alphaproteobacteria
GGT
Thr
>WENV183716586
PDWJ01000058
178507
Alphaproteobacteria
GTG
His
>WENV183716589
PDWJ01000063
353624
Alphaproteobacteria
CCA
Trp
>WENV183716590
PDWJ01000063
283256
Alphaproteobacteria
CGT
Thr
>WENV183716591
PDWJ01000063
156125
Alphaproteobacteria
TCT
Arg
>WENV183716592
PDWJ01000063
428327
Alphaproteobacteria
GCC
Gly
>WENV183716593
PDWJ01000063
140876
Alphaproteobacteria
>WENV183716641
PDWJ01000100
435083
Alphaproteobacteria
>WENV183716644
PDWJ01000100
77412
Alphaproteobacteria
CAG
Leu
>WENV183716698
PDWJ01000139
399480
Alphaproteobacteria
GAA
Phe
>WENV183716767
PDWJ01000174
97838
Alphaproteobacteria
GAG
Leu
>WENV183716768
PDWJ01000174
400386
Alphaproteobacteria
TTG
Gln
>WENV183716790
PDWJ01000188
400693
Alphaproteobacteria
GCC
Gly
>WENV183716817
PDWJ01000208
178509
Alphaproteobacteria
CCT
Arg
>WENV183716864
PDWJ01000230
180029
Alphaproteobacteria
CAT
Met
>WENV183716866
PDWJ01000230
446430
Alphaproteobacteria
CAC
Val
>WENV183716870
PDWJ01000232
282658
Alphaproteobacteria
CGT
Thr
>WENV183716880
PDWJ01000236
398996
Alphaproteobacteria
GCC
Gly
>WENV183716895
PDWJ01000246
281650
Alphaproteobacteria
CCA
Trp
>WENV183716964
PDWJ01000316
400386
Alphaproteobacteria
TTG
Gln
>WENV183717024
PDWJ01000385
29869
Alphaproteobacteria
GGA
Ser
>WENV183717025
PDWJ01000385
446430
Alphaproteobacteria
CAC
Val
>WENV183717026
PDWJ01000385
178505
Alphaproteobacteria
CCG
Arg
>WENV183717037
PDWJ01000399
281676
Alphaproteobacteria
TAC
Val
>WENV183717043
PDWJ01000403
314617
Alphaproteobacteria
TAC
Val
>WENV183717046
PDWJ01000404
428327
Alphaproteobacteria
GCC
Gly
>WENV183717051
PDWJ01000412
29701
Alphaproteobacteria
CGA
Ser
>WENV183717057
PDWJ01000414
481268
Alphaproteobacteria
TCC
Gly
>WENV183717060
PDWJ01000417
140876
Alphaproteobacteria
>WENV183717061
PDWJ01000421
179639
Alphaproteobacteria
ACG
Arg
>WENV183717091
PDWJ01000454
178503
Alphaproteobacteria
GGG
Pro
>WENV183717195
PDWJ01000562
29495
Alphaproteobacteria
GCT
Ser
>WENV183717279
PDWJ01000682
118213
Alphaproteobacteria
TAG
Leu
>WENV183717398
PDWJ01000856
290029
Alphaproteobacteria
TGT
Thr
>WENV183717418
PDWJ01000902
481268
Alphaproteobacteria
TCC
Gly
>WENV183717465
PDWJ01000958
283255
Alphaproteobacteria
GGC
Ala
>WENV183717468
PDWJ01000962
400384
Alphaproteobacteria
TTC
Glu
>WENV183717651
PDWJ01001320
179639
Alphaproteobacteria
ACG
Arg
>WENV183717746
PDWJ01001518
140932
Alphaproteobacteria
>WENV183717766
PDWJ01001557
398994
Alphaproteobacteria
GTT
Asn
>WENV183717785
PDWJ01001625
283257
Alphaproteobacteria
TTT
Lys
>WENV183717888
PDWJ01001877
29841
Alphaproteobacteria
GGA
Ser
>WENV183718050
PDWJ01002269
212319
Alphaproteobacteria
GTG
His
>WENV183718059
PDWJ01002285
305449
Alphaproteobacteria
CGT
Thr
>WENV183718130
PDWJ01002520
353624
Alphaproteobacteria
CCA
Trp
>WENV183718143
PDWJ01002570
399480
Alphaproteobacteria
GAA
Phe
>WENV183718457
PDWJ01004189
398994
Alphaproteobacteria
GTT
Asn
>WENV183718477
PDWJ01004327
29495
Alphaproteobacteria
GCT
Ser
>WENV183718561
PDWJ01004905
399480
Alphaproteobacteria
GAA
Phe
>WENV183718599
PDWJ01005291
29495
Alphaproteobacteria
GCT
Ser
>WENV183718914
PDWJ01007672
29701
Alphaproteobacteria
CGA
Ser
>WENV183718993
PDWJ01008526
29495
Alphaproteobacteria
GCT
Ser
>WENV183719021
PDWJ01008908
400384
Alphaproteobacteria
TTC
Glu
>WENV183719120
PDWJ01009883
178509
Alphaproteobacteria
CCT
Arg
>WENV183719137
PDWJ01010095
180029
Alphaproteobacteria
CAT
Met
>WENV183719138
PDWJ01010095
398994
Alphaproteobacteria
GTT
Asn
>WENV183719206
PDWJ01010738
284796
Alphaproteobacteria
CGT
Thr
>WENV183719207
PDWJ01010765
178509
Alphaproteobacteria
CCT
Arg
>WENV183719230
PDWJ01010918
401037
Alphaproteobacteria
TTG
Gln
>WENV183719358
PDWJ01012942
212319
Alphaproteobacteria
GTG
His
>WENV183719395
PDWJ01013772
283255
Alphaproteobacteria
GGC
Ala
>WENV183719396
PDWJ01013772
283255
Alphaproteobacteria
GGC
Ala
>WENV183719446
PDWJ01014300
453762
Alphaproteobacteria
CAC
Val
>WENV183719504
PDWJ01015363
400384
Alphaproteobacteria
TTC
Glu
>WENV183719598
PDWJ01016980
140876
Alphaproteobacteria
>WENV183719604
PDWJ01017013
199130
Alphaproteobacteria
GAT
Ile
>WENV183719690
PDWJ01018709
29702
Alphaproteobacteria
GGA
Ser
>WENV183719709
PDWJ01018981
284796
Alphaproteobacteria
CGT
Thr
>WENV183719970
PDWJ01024086
283257
Alphaproteobacteria
TTT
Lys
>WENV183719971
PDWJ01024087
283257
Alphaproteobacteria
TTT
Lys
>WENV183720011
PDWJ01024643
29495
Alphaproteobacteria
GCT
Ser
>WENV183720039
PDWJ01025239
398994
Alphaproteobacteria
GTT
Asn
>WENV183720321
PDWJ01031471
428327
Alphaproteobacteria
GCC
Gly
>WENV183720339
PDWJ01031876
179768
Alphaproteobacteria
TGG
Pro
>WENV183720341
PDWJ01031922
283257
Alphaproteobacteria
TTT
Lys
>WENV183720433
PDWJ01034308
399480
Alphaproteobacteria
GAA
Phe
>WENV183720522
PDWJ01036196
178503
Alphaproteobacteria
GGG
Pro
>WENV183720592
PDWJ01038673
400386
Alphaproteobacteria
TTG
Gln
>WENV183720593
PDWJ01038690
400386
Alphaproteobacteria
TTG
Gln
>WENV183720784
PDWJ01045344
178509
Alphaproteobacteria
CCT
Arg
>WENV183720850
PDWJ01047277
399480
Alphaproteobacteria
GAA
Phe
>WENV183720957
PDWJ01050522
283257
Alphaproteobacteria
TTT
Lys
>WENV183720963
PDWJ01050736
29701
Alphaproteobacteria
CGA
Ser
>WENV183721071
PDWJ01054196
281676
Alphaproteobacteria
TAC
Val
>WENV183721104
PDWJ01055423
400384
Alphaproteobacteria
TTC
Glu
>WENV183721187
PDWJ01058140
400384
Alphaproteobacteria
TTC
Glu
>WENV183721297
PDWJ01063146
398994
Alphaproteobacteria
GTT
Asn
>WENV183721436
PDWJ01069436
435083
Alphaproteobacteria
>WENV183721459
PDWJ01070700
178509
Alphaproteobacteria
CCT
Arg
>WENV183721695
PDWJ01080895
435083
Alphaproteobacteria
>WENV183721784
PDWJ01086033
398994
Alphaproteobacteria
GTT
Asn
>WENV183721864
PDWJ01091618
140876
Alphaproteobacteria
>WENV183721947
PDWJ01096123
400384
Alphaproteobacteria
TTC
Glu
>WENV183722089
PDWJ01105129
283255
Alphaproteobacteria
GGC
Ala
>WENV183722090
PDWJ01105129
283255
Alphaproteobacteria
GGC
Ala
>WENV183722238
PDWJ01114018
29701
Alphaproteobacteria
CGA
Ser
>WENV183722402
PDWJ01125500
29495
Alphaproteobacteria
GCT
Ser
>WENV183722411
PDWJ01126794
398994
Alphaproteobacteria
GTT
Asn
>WENV183722467
PDWJ01131428
29702
Alphaproteobacteria
GGA
Ser
>WENV183722559
PDWJ01138646
398994
Alphaproteobacteria
GTT
Asn
>WENV183722692
PDWJ01148467
481268
Alphaproteobacteria
TCC
Gly
>WENV183722698
PDWJ01148814
400384
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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