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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735366
PJUA01016837
176233
Alphaproteobacteria
>WENV183735329
PJUA01012449
76208
Alphaproteobacteria
CAG
Leu
>WENV183735257
PJUA01005906
73747
Alphaproteobacteria
CAG
Leu
>WENV183734933
PJUA01000175
73735
Alphaproteobacteria
CAG
Leu
>WENV183735089
PJUA01000837
73735
Alphaproteobacteria
CAG
Leu
>WENV183735019
PJUA01000397
281238
Alphaproteobacteria
CAT
Met
>WENV183734958
PJUA01000239
399210
Alphaproteobacteria
CAT
Met
>WENV183735369
PJUA01016901
280873
Alphaproteobacteria
CCA
Trp
>WENV183735044
PJUA01000556
296763
Alphaproteobacteria
CCA
Trp
>WENV183735013
PJUA01000373
184194
Alphaproteobacteria
CCT
Arg
>WENV183734932
PJUA01000175
29451
Alphaproteobacteria
CGA
Ser
>WENV183735152
PJUA01001322
281235
Alphaproteobacteria
CGC
Ala
>WENV183735110
PJUA01000997
176634
Alphaproteobacteria
CGG
Pro
>WENV183734975
PJUA01000312
399238
Alphaproteobacteria
CGT
Thr
>WENV183735224
PJUA01003993
481305
Alphaproteobacteria
CTG
Gln
>WENV183735085
PJUA01000820
403890
Alphaproteobacteria
GAC
Val
>WENV183735339
PJUA01014151
176633
Alphaproteobacteria
GAT
Ile
>WENV183735370
PJUA01017512
176633
Alphaproteobacteria
GAT
Ile
>WENV183735393
PJUA01021874
176633
Alphaproteobacteria
GAT
Ile
>WENV183735065
PJUA01000650
480507
Alphaproteobacteria
GCA
Cys
>WENV183734987
PJUA01000334
404744
Alphaproteobacteria
GCC
Gly
>WENV183735071
PJUA01000752
404744
Alphaproteobacteria
GCC
Gly
>WENV183735262
PJUA01006236
404744
Alphaproteobacteria
GCC
Gly
>WENV183735401
PJUA01023497
29939
Alphaproteobacteria
GGA
Ser
>WENV183734974
PJUA01000311
176636
Alphaproteobacteria
GGG
Pro
>WENV183735325
PJUA01011949
118100
Alphaproteobacteria
GTA
Tyr
>WENV183735105
PJUA01000979
99915
Alphaproteobacteria
GTA
Tyr
>WENV183735119
PJUA01001107
99915
Alphaproteobacteria
GTA
Tyr
>WENV183735079
PJUA01000792
281231
Alphaproteobacteria
GTG
His
>WENV183734997
PJUA01000356
281232
Alphaproteobacteria
GTT
Asn
>WENV183735066
PJUA01000650
281232
Alphaproteobacteria
GTT
Asn
>WENV183735080
PJUA01000792
119367
Alphaproteobacteria
TAG
Leu
>WENV183735298
PJUA01009677
179858
Alphaproteobacteria
TCT
Arg
>WENV183735043
PJUA01000542
184192
Alphaproteobacteria
TCT
Arg
>WENV183735042
PJUA01000542
155778
Alphaproteobacteria
TGG
Pro
>WENV183734980
PJUA01000313
289359
Alphaproteobacteria
TTC
Glu
>WENV183735124
PJUA01001126
289359
Alphaproteobacteria
TTC
Glu
>WENV183735041
PJUA01000542
284374
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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