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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170084038
CEAB01000625
190476
Bacillota
CAT
Met
>WENV170084039
CEAB01000625
398832
Bacillota
TTC
Glu
>WENV170084048
CEAB01000743
480322
Bacillota
CTG
Gln
>WENV170084070
CEAB01001646
405363
Bacillota
GCA
Cys
>WENV170084075
CEAB01002248
73009
Bacillota
CAG
Leu
>WENV170084089
CEAB01002467
175842
Bacillota
CAC
Val
>WENV170084110
CEAB01003789
291581
Bacillota
CGG
Pro
>WENV170084109
CEAB01003789
480322
Bacillota
CTG
Gln
>WENV170084116
CEAB01004084
295166
Bacillota
TGC
Ala
>WENV170084131
CEAB01004189
99852
Bacillota
GTA
Tyr
>WENV170084139
CEAB01004685
56074
Bacillota
TGA
Ser
>WENV170084206
CEAB01007224
280447
Bacillota
GAC
Val
>WENV170084223
CEAB01007539
291576
Bacillota
CCC
Gly
>WENV170084255
CEAB01008483
398833
Bacillota
TGT
Thr
>WENV170084260
CEAB01008932
175859
Bacillota
TCT
Arg
>WENV170084311
CEAB01010346
280444
Bacillota
GGT
Thr
>WENV170084328
CEAB01011287
295350
Bacillota
TGC
Ala
>WENV170084329
CEAB01011287
186051
Bacillota
GAT
Ile
>WENV170084356
CEAB01012597
175831
Bacillota
ACG
Arg
>WENV170084370
CEAB01013752
175859
Bacillota
TCT
Arg
>WENV170084385
CEAB01014287
398833
Bacillota
TGT
Thr
>WENV170084410
CEAB01015318
291576
Bacillota
CCC
Gly
>WENV170084411
CEAB01015339
99852
Bacillota
GTA
Tyr
>WENV170084433
CEAB01015992
280466
Bacillota
TAC
Val
>WENV170084461
CEAB01016651
190476
Bacillota
CAT
Met
>WENV170084462
CEAB01016651
398832
Bacillota
TTC
Glu
>WENV170084491
CEAB01017860
73009
Bacillota
CAG
Leu
>WENV170084514
CEAB01019176
480324
Bacillota
TTG
Gln
>WENV170084517
CEAB01019525
280444
Bacillota
GGT
Thr
>WENV170084518
CEAB01019525
280444
Bacillota
GGT
Thr
>WENV170084516
CEAB01019525
175849
Bacillota
GTC
Asp
>WENV170084549
CEAB01020299
118669
Bacillota
GTA
Tyr
>WENV170084558
CEAB01020360
99852
Bacillota
GTA
Tyr
>WENV170084761
CEAB01028066
405363
Bacillota
GCA
Cys
>WENV170084757
CEAB01028066
175849
Bacillota
GTC
Asp
>WENV170084759
CEAB01028066
175849
Bacillota
GTC
Asp
>WENV170084766
CEAB01028172
280444
Bacillota
GGT
Thr
>WENV170084768
CEAB01028172
280444
Bacillota
GGT
Thr
>WENV170084767
CEAB01028172
175849
Bacillota
GTC
Asp
>WENV170084774
CEAB01028583
480322
Bacillota
CTG
Gln
>WENV170084781
CEAB01029159
186051
Bacillota
GAT
Ile
>WENV170084791
CEAB01029329
73009
Bacillota
CAG
Leu
>WENV170084848
CEAB01031124
56074
Bacillota
TGA
Ser
>WENV170084862
CEAB01032205
280473
Bacillota
TGG
Pro
>WENV170084880
CEAB01032795
5692
Bacillota
GCT
Ser
>WENV170084893
CEAB01033024
398832
Bacillota
TTC
Glu
>WENV170084940
CEAB01034750
398852
Bacillota
CTC
Glu
>WENV170084941
CEAB01034750
398852
Bacillota
CTC
Glu
>WENV170084942
CEAB01034750
398852
Bacillota
CTC
Glu
>WENV170084949
CEAB01035289
175868
Bacillota
GTT
Asn
>WENV170084970
CEAB01035437
484885
Bacillota
TCC
Gly
>WENV170084973
CEAB01035855
280428
Bacillota
GAA
Phe
>WENV170084978
CEAB01035907
175868
Bacillota
GTT
Asn
>WENV170084977
CEAB01035907
398854
Bacillota
CTC
Glu
>WENV170085004
CEAB01036554
175831
Bacillota
ACG
Arg
>WENV170085032
CEAB01037143
175868
Bacillota
GTT
Asn
>WENV170085044
CEAB01037603
291581
Bacillota
CGG
Pro
>WENV170085043
CEAB01037603
480322
Bacillota
CTG
Gln
>WENV170085049
CEAB01037843
280473
Bacillota
TGG
Pro
>WENV170085059
CEAB01038038
175842
Bacillota
CAC
Val
>WENV170085072
CEAB01038549
480322
Bacillota
CTG
Gln
>WENV170085074
CEAB01038553
480322
Bacillota
CTG
Gln
>WENV170085080
CEAB01038733
73009
Bacillota
CAG
Leu
>WENV170085134
CEAB01040464
179755
Bacillota
CCG
Arg
>WENV170085219
CEAB01042843
175859
Bacillota
TCT
Arg
>WENV170085261
CEAB01044274
175859
Bacillota
TCT
Arg
>WENV170085302
CEAB01045889
280447
Bacillota
GAC
Val
>WENV170085339
CEAB01047001
5692
Bacillota
GCT
Ser
>WENV170085338
CEAB01047001
56074
Bacillota
TGA
Ser
>WENV170085340
CEAB01047079
480322
Bacillota
CTG
Gln
>WENV170085348
CEAB01047101
398852
Bacillota
CTC
Glu
>WENV170085349
CEAB01047101
398852
Bacillota
CTC
Glu
>WENV170085370
CEAB01047842
179755
Bacillota
CCG
Arg
>WENV170085375
CEAB01048241
291581
Bacillota
CGG
Pro
>WENV170085374
CEAB01048241
480322
Bacillota
CTG
Gln
>WENV170085377
CEAB01048266
175868
Bacillota
GTT
Asn
>WENV170085376
CEAB01048266
398854
Bacillota
CTC
Glu
>WENV170085435
CEAB01050172
179563
Bacillota
GAT
Ile
>WENV170085434
CEAB01050172
295166
Bacillota
TGC
Ala
>WENV170085437
CEAB01050214
186051
Bacillota
GAT
Ile
>WENV170085457
CEAB01050338
280428
Bacillota
GAA
Phe
>WENV170085455
CEAB01050338
280466
Bacillota
TAC
Val
>WENV170085456
CEAB01050338
175849
Bacillota
GTC
Asp
>WENV170085503
CEAB01051809
175842
Bacillota
CAC
Val
>WENV170085567
CEAB01054955
175842
Bacillota
CAC
Val
>WENV170085595
CEAB01055522
179810
Bacillota
TCT
Arg
>WENV170085596
CEAB01055522
175857
Bacillota
GTG
His
>WENV170085622
CEAB01056646
280500
Bacillota
TGC
Ala
>WENV170085623
CEAB01056692
291576
Bacillota
CCC
Gly
>WENV170085631
CEAB01057294
175868
Bacillota
GTT
Asn
>WENV170085641
CEAB01057911
303718
Bacillota
TGT
Thr
>WENV170085652
CEAB01058140
280447
Bacillota
GAC
Val
>WENV170085655
CEAB01058452
480324
Bacillota
TTG
Gln
>WENV170085665
CEAB01059014
73009
Bacillota
CAG
Leu
>WENV170085666
CEAB01059027
480322
Bacillota
CTG
Gln
>WENV170085667
CEAB01059035
280447
Bacillota
GAC
Val
>WENV170085679
CEAB01059635
56074
Bacillota
TGA
Ser
>WENV170085692
CEAB01060367
312380
Bacillota
TAC
Val
>WENV170085722
CEAB01061498
280473
Bacillota
TGG
Pro
>WENV170085751
CEAB01062315
398854
Bacillota
CTC
Glu
>WENV170085764
CEAB01062695
179563
Bacillota
GAT
Ile
>WENV170085778
CEAB01062963
175859
Bacillota
TCT
Arg
>WENV170085782
CEAB01062992
280428
Bacillota
GAA
Phe
>WENV170085780
CEAB01062992
280466
Bacillota
TAC
Val
>WENV170085781
CEAB01062992
175849
Bacillota
GTC
Asp
>WENV170085794
CEAB01063703
175842
Bacillota
CAC
Val
>WENV170085807
CEAB01064385
186051
Bacillota
GAT
Ile
>WENV170085828
CEAB01065056
175868
Bacillota
GTT
Asn
>WENV170085879
CEAB01067549
73664
Bacillota
CAG
Leu
>WENV170085881
CEAB01067569
5692
Bacillota
GCT
Ser
>WENV170085893
CEAB01068062
179755
Bacillota
CCG
Arg
>WENV170085901
CEAB01068553
480324
Bacillota
TTG
Gln
>WENV170085928
CEAB01068788
190476
Bacillota
CAT
Met
>WENV170085937
CEAB01068801
398857
Bacillota
TTC
Glu
>WENV170085963
CEAB01069928
280444
Bacillota
GGT
Thr
>WENV170085962
CEAB01069928
175849
Bacillota
GTC
Asp
>WENV170085987
CEAB01071035
175868
Bacillota
GTT
Asn
>WENV170085999
CEAB01071735
303718
Bacillota
TGT
Thr
>WENV170086065
CEAB01073149
280473
Bacillota
TGG
Pro
>WENV170086108
CEAB01073846
73009
Bacillota
CAG
Leu
>WENV170086109
CEAB01073920
398833
Bacillota
TGT
Thr
>WENV170086163
CEAB01075668
179755
Bacillota
CCG
Arg
>WENV170086170
CEAB01076167
280447
Bacillota
GAC
Val
>WENV170086197
CEAB01076774
398833
Bacillota
TGT
Thr
>WENV170086198
CEAB01076897
175842
Bacillota
CAC
Val
>WENV170086199
CEAB01077021
291581
Bacillota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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