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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181098396
OECI01000004
398852
Bacillota
CTC
Glu
>WENV181098409
OECI01000009
223045
Bacillota
GAT
Ile
>WENV181098422
OECI01000012
175857
Bacillota
GTG
His
>WENV181098424
OECI01000012
280463
Bacillota
TTT
Lys
>WENV181098432
OECI01000016
342104
Bacillota
TAC
Val
>WENV181098448
OECI01000023
280462
Bacillota
GAA
Phe
>WENV181098450
OECI01000023
398852
Bacillota
CTC
Glu
>WENV181098575
OECI01000111
398852
Bacillota
CTC
Glu
>WENV181098624
OECI01000156
73664
Bacillota
CAG
Leu
>WENV181098622
OECI01000156
56079
Bacillota
AAG
Leu
>WENV181098623
OECI01000156
56079
Bacillota
AAG
Leu
>WENV181098703
OECI01000228
117745
Bacillota
GTA
Tyr
>WENV181098763
OECI01000290
280492
Bacillota
CTT
Lys
>WENV181098790
OECI01000323
229015
Bacillota
GTG
His
>WENV181098885
OECI01000455
303718
Bacillota
TGT
Thr
>WENV181098997
OECI01000705
179917
Bacillota
CAT
Met
>WENV181099054
OECI01000819
280492
Bacillota
CTT
Lys
>WENV181099077
OECI01000889
5692
Bacillota
GCT
Ser
>WENV181099076
OECI01000889
56074
Bacillota
TGA
Ser
>WENV181099100
OECI01000965
175842
Bacillota
CAC
Val
>WENV181099189
OECI01001334
398832
Bacillota
TTC
Glu
>WENV181099196
OECI01001354
175868
Bacillota
GTT
Asn
>WENV181099258
OECI01001692
175868
Bacillota
GTT
Asn
>WENV181099277
OECI01001831
280447
Bacillota
GAC
Val
>WENV181099335
OECI01002138
175859
Bacillota
TCT
Arg
>WENV181099337
OECI01002146
73009
Bacillota
CAG
Leu
>WENV181099346
OECI01002188
175899
Bacillota
GTC
Asp
>WENV181099349
OECI01002188
117745
Bacillota
GTA
Tyr
>WENV181099351
OECI01002188
280462
Bacillota
GAA
Phe
>WENV181099352
OECI01002188
280463
Bacillota
TTT
Lys
>WENV181099359
OECI01002240
280444
Bacillota
GGT
Thr
>WENV181099372
OECI01002335
280473
Bacillota
TGG
Pro
>WENV181099384
OECI01002375
480324
Bacillota
TTG
Gln
>WENV181099421
OECI01002755
398833
Bacillota
TGT
Thr
>WENV181099453
OECI01002974
480322
Bacillota
CTG
Gln
>WENV181099503
OECI01003606
291576
Bacillota
CCC
Gly
>WENV181099512
OECI01003897
349107
Bacillota
GCC
Gly
>WENV181099516
OECI01003897
349107
Bacillota
GCC
Gly
>WENV181099515
OECI01003897
280428
Bacillota
GAA
Phe
>WENV181099513
OECI01003897
280466
Bacillota
TAC
Val
>WENV181099514
OECI01003897
175849
Bacillota
GTC
Asp
>WENV181099517
OECI01003909
291576
Bacillota
CCC
Gly
>WENV181099528
OECI01004043
190476
Bacillota
CAT
Met
>WENV181099529
OECI01004043
398832
Bacillota
TTC
Glu
>WENV181099531
OECI01004053
175868
Bacillota
GTT
Asn
>WENV181099551
OECI01004380
179755
Bacillota
CCG
Arg
>WENV181099573
OECI01004753
455259
Bacillota
TTC
Glu
>WENV181099599
OECI01005451
280473
Bacillota
TGG
Pro
>WENV181099602
OECI01005467
99852
Bacillota
GTA
Tyr
>WENV181099615
OECI01005722
480324
Bacillota
TTG
Gln
>WENV181099624
OECI01005998
480322
Bacillota
CTG
Gln
>WENV181099634
OECI01006157
291581
Bacillota
CGG
Pro
>WENV181099633
OECI01006157
480322
Bacillota
CTG
Gln
>WENV181099669
OECI01006975
280447
Bacillota
GAC
Val
>WENV181099670
OECI01006991
280447
Bacillota
GAC
Val
>WENV181099683
OECI01007438
179563
Bacillota
GAT
Ile
>WENV181099682
OECI01007438
353153
Bacillota
TGC
Ala
>WENV181099684
OECI01007485
99852
Bacillota
GTA
Tyr
>WENV181099688
OECI01007635
291581
Bacillota
CGG
Pro
>WENV181099687
OECI01007635
480322
Bacillota
CTG
Gln
>WENV181099694
OECI01008059
175831
Bacillota
ACG
Arg
>WENV181099696
OECI01008180
280444
Bacillota
GGT
Thr
>WENV181099695
OECI01008180
175849
Bacillota
GTC
Asp
>WENV181099697
OECI01008205
398854
Bacillota
CTC
Glu
>WENV181099714
OECI01009005
73009
Bacillota
CAG
Leu
>WENV181099722
OECI01009147
175899
Bacillota
GTC
Asp
>WENV181099747
OECI01010301
407858
Bacillota
GCC
Gly
>WENV181099753
OECI01010740
175868
Bacillota
GTT
Asn
>WENV181099764
OECI01011770
280428
Bacillota
GAA
Phe
>WENV181099791
OECI01012938
280444
Bacillota
GGT
Thr
>WENV181099795
OECI01013413
398854
Bacillota
CTC
Glu
>WENV181099817
OECI01015473
189473
Bacillota
GAT
Ile
>WENV181099837
OECI01017119
342104
Bacillota
TAC
Val
>WENV181099866
OECI01019665
398833
Bacillota
TGT
Thr
>WENV181099871
OECI01019859
343590
Bacillota
GCC
Gly
>WENV181099892
OECI01021585
349107
Bacillota
GCC
Gly
>WENV181099893
OECI01021585
405363
Bacillota
GCA
Cys
>WENV181099891
OECI01021585
175849
Bacillota
GTC
Asp
>WENV181099894
OECI01021655
398854
Bacillota
CTC
Glu
>WENV181099896
OECI01021894
291581
Bacillota
CGG
Pro
>WENV181099895
OECI01021894
480322
Bacillota
CTG
Gln
>WENV181099911
OECI01025204
280500
Bacillota
TGC
Ala
>WENV181099910
OECI01025204
175916
Bacillota
GAT
Ile
>WENV181099928
OECI01027348
280500
Bacillota
TGC
Ala
>WENV181099940
OECI01028549
280444
Bacillota
GGT
Thr
>WENV181099939
OECI01028549
175849
Bacillota
GTC
Asp
>WENV181099949
OECI01030456
280447
Bacillota
GAC
Val
>WENV181099950
OECI01030619
175831
Bacillota
ACG
Arg
>WENV181099965
OECI01033440
186051
Bacillota
GAT
Ile
>WENV181099979
OECI01037654
280473
Bacillota
TGG
Pro
>WENV181100003
OECI01042519
480324
Bacillota
TTG
Gln
>WENV181100025
OECI01045673
349107
Bacillota
GCC
Gly
>WENV181100026
OECI01045673
405363
Bacillota
GCA
Cys
>WENV181100023
OECI01045673
280466
Bacillota
TAC
Val
>WENV181100024
OECI01045673
175849
Bacillota
GTC
Asp
>WENV181100051
OECI01053367
323864
Bacillota
TGC
Ala
>WENV181100060
OECI01058176
497729
Bacillota
CCA
Trp
>WENV181100066
OECI01060203
332891
Bacillota
TGC
Ala
>WENV181100082
OECI01064761
189473
Bacillota
GAT
Ile
>WENV181100095
OECI01067248
360353
Bacillota
CTT
Lys
>WENV181100100
OECI01068507
175825
Bacillota
GAT
Ile
>WENV181100099
OECI01068507
280436
Bacillota
TGC
Ala
>WENV181100132
OECI01081865
175831
Bacillota
ACG
Arg
>WENV181100144
OECI01087131
280444
Bacillota
GGT
Thr
>WENV181100143
OECI01087131
175849
Bacillota
GTC
Asp
>WENV181100167
OECI01095852
290325
Bacillota
GCC
Gly
>WENV181100197
OECI01122822
175849
Bacillota
GTC
Asp
>WENV181100235
OECI01156370
296941
Bacillota
TGC
Ala
>WENV181100337
OECI01235459
349107
Bacillota
GCC
Gly
>WENV181100346
OECI01237493
73009
Bacillota
CAG
Leu
>WENV181100348
OECI01237895
46643
Bacillota
TGA
Ser
>WENV181100358
OECI01238332
175842
Bacillota
CAC
Val
>WENV181100363
OECI01238372
280428
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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