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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183428871
OMBO01000408
180990
Bacillota
CGG
Pro
>WENV183428762
OMBO01000240
283494
Bacillota
GTT
Asn
>WENV183429193
OMBO01004750
118683
Bacillota
GTA
Tyr
>WENV183428758
OMBO01000235
401879
Bacillota
TTG
Gln
>WENV183428864
OMBO01000408
285945
Bacillota
TTT
Lys
>WENV183428817
OMBO01000324
183730
Bacillota
CAT
Met
>WENV183428777
OMBO01000251
184114
Bacillota
GTG
His
>WENV183428866
OMBO01000408
281413
Bacillota
TGT
Thr
>WENV183428572
OMBO01000059
283762
Bacillota
CCT
Arg
>WENV183428971
OMBO01000842
184086
Bacillota
GTT
Asn
>WENV183428763
OMBO01000240
407852
Bacillota
TTC
Glu
>WENV183429361
OMBO01015939
179563
Bacillota
GAT
Ile
>WENV183428463
OMBO01000007
285947
Bacillota
CTG
Gln
>WENV183428601
OMBO01000074
481167
Bacillota
GCA
Cys
>WENV183428460
OMBO01000006
283493
Bacillota
CTC
Glu
>WENV183429222
OMBO01006200
73664
Bacillota
CAG
Leu
>WENV183429370
OMBO01016374
280447
Bacillota
GAC
Val
>WENV183429354
OMBO01015678
5692
Bacillota
GCT
Ser
>WENV183429470
OMBO01028168
284101
Bacillota
GTC
Asp
>WENV183429381
OMBO01017840
73009
Bacillota
CAG
Leu
>WENV183428625
OMBO01000085
180991
Bacillota
TCT
Arg
>WENV183429378
OMBO01017538
487804
Bacillota
GGT
Thr
>WENV183429352
OMBO01015309
481217
Bacillota
GCA
Cys
>WENV183428759
OMBO01000235
46953
Bacillota
AAG
Leu
>WENV183429230
OMBO01006502
189473
Bacillota
GAT
Ile
>WENV183429441
OMBO01024411
291581
Bacillota
CGG
Pro
>WENV183428863
OMBO01000408
302092
Bacillota
TAC
Val
>WENV183428839
OMBO01000359
283760
Bacillota
GGT
Thr
>WENV183429468
OMBO01028168
9377
Bacillota
TGA
Ser
>WENV183428879
OMBO01000422
284016
Bacillota
CTT
Lys
>WENV183428633
OMBO01000097
285946
Bacillota
GGT
Thr
>WENV183428821
OMBO01000324
20460
Bacillota
GCT
Ser
>WENV183428764
OMBO01000240
285948
Bacillota
CGT
Thr
>WENV183428714
OMBO01000175
180992
Bacillota
CCT
Arg
>WENV183429440
OMBO01024411
480322
Bacillota
CTG
Gln
>WENV183429261
OMBO01008531
175868
Bacillota
GTT
Asn
>WENV183428949
OMBO01000706
29760
Bacillota
CGA
Ser
>WENV183429304
OMBO01011568
119278
Bacillota
TAG
Leu
>WENV183429344
OMBO01014747
322848
Bacillota
CTT
Lys
>WENV183429260
OMBO01008531
398854
Bacillota
CTC
Glu
>WENV183428731
OMBO01000200
400614
Bacillota
CCG
Arg
>WENV183429362
OMBO01016006
480324
Bacillota
TTG
Gln
>WENV183428464
OMBO01000007
20648
Bacillota
CGA
Ser
>WENV183428548
OMBO01000048
303718
Bacillota
TGT
Thr
>WENV183428655
OMBO01000119
303718
Bacillota
TGT
Thr
>WENV183429055
OMBO01001588
303718
Bacillota
TGT
Thr
>WENV183428602
OMBO01000074
178972
Bacillota
TCT
Arg
>WENV183428865
OMBO01000408
100512
Bacillota
TAG
Leu
>WENV183428934
OMBO01000588
100225
Bacillota
CAG
Leu
>WENV183428462
OMBO01000007
481771
Bacillota
CCC
Gly
>WENV183428452
OMBO01000005
317482
Bacillota
TAC
Val
>WENV183428888
OMBO01000450
317482
Bacillota
TAC
Val
>WENV183429166
OMBO01003975
483485
Bacillota
CCC
Gly
>WENV183428742
OMBO01000221
20461
Bacillota
GGA
Ser
>WENV183429373
OMBO01016608
281326
Bacillota
TGC
Ala
>WENV183429321
OMBO01012250
73616
Bacillota
CAA
Leu
>WENV183429471
OMBO01028168
283492
Bacillota
GAA
Phe
>WENV183429315
OMBO01012039
198522
Bacillota
GAT
Ile
>WENV183428718
OMBO01000178
283761
Bacillota
CGT
Thr
>WENV183428757
OMBO01000235
105208
Bacillota
GTA
Tyr
>WENV183429450
OMBO01025856
46835
Bacillota
TAA
Leu
>WENV183428916
OMBO01000509
398832
Bacillota
TTC
Glu
>WENV183429449
OMBO01025856
175915
Bacillota
GTC
Asp
>WENV183428740
OMBO01000216
46821
Bacillota
TAA
Leu
>WENV183428626
OMBO01000085
74129
Bacillota
CAG
Leu
>WENV183428960
OMBO01000771
74812
Bacillota
TAA
Leu
>WENV183428869
OMBO01000408
178962
Bacillota
ACG
Arg
>WENV183429414
OMBO01022141
280476
Bacillota
TTT
Lys
>WENV183429184
OMBO01004395
8724
Bacillota
GCT
Ser
>WENV183428952
OMBO01000717
298260
Bacillota
GTT
Asn
>WENV183429288
OMBO01010855
175857
Bacillota
GTG
His
>WENV183428752
OMBO01000226
285756
Bacillota
GCC
Gly
>WENV183429442
OMBO01024805
398833
Bacillota
TGT
Thr
>WENV183429514
OMBO01036283
280486
Bacillota
TGC
Ala
>WENV183428743
OMBO01000221
47133
Bacillota
AAG
Leu
>WENV183428767
OMBO01000245
47133
Bacillota
AAG
Leu
>WENV183429353
OMBO01015678
56074
Bacillota
TGA
Ser
>WENV183429296
OMBO01011144
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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