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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183465511
OMEB01000015
404076
Bacillota
GCC
Gly
>WENV183465674
OMEB01000417
404076
Bacillota
GCC
Gly
>WENV183465711
OMEB01000581
404076
Bacillota
GCC
Gly
>WENV183465509
OMEB01000015
184504
Bacillota
GTC
Asp
>WENV183465710
OMEB01000581
184504
Bacillota
GTC
Asp
>WENV183465882
OMEB01003443
289472
Bacillota
TTC
Glu
>WENV183465838
OMEB01002377
183994
Bacillota
TCT
Arg
>WENV183465584
OMEB01000122
280492
Bacillota
CTT
Lys
>WENV183466025
OMEB01014372
184497
Bacillota
GGG
Pro
>WENV183465974
OMEB01008896
179563
Bacillota
GAT
Ile
>WENV183465682
OMEB01000436
101000
Bacillota
GTA
Tyr
>WENV183465490
OMEB01000006
404079
Bacillota
CAT
Met
>WENV183465913
OMEB01004787
190476
Bacillota
CAT
Met
>WENV183465628
OMEB01000216
184522
Bacillota
CCT
Arg
>WENV183465602
OMEB01000150
73664
Bacillota
CAG
Leu
>WENV183465688
OMEB01000459
47207
Bacillota
TGA
Ser
>WENV183466133
OMEB01035364
175825
Bacillota
GAT
Ile
>WENV183466026
OMEB01014452
73009
Bacillota
CAG
Leu
>WENV183466101
OMEB01027655
481217
Bacillota
GCA
Cys
>WENV183465685
OMEB01000436
183993
Bacillota
CAT
Met
>WENV183465897
OMEB01004120
175859
Bacillota
TCT
Arg
>WENV183465684
OMEB01000436
289149
Bacillota
GGT
Thr
>WENV183465625
OMEB01000212
47166
Bacillota
CGA
Ser
>WENV183465879
OMEB01003443
289147
Bacillota
GTT
Asn
>WENV183465580
OMEB01000116
289475
Bacillota
GTG
His
>WENV183465616
OMEB01000184
183957
Bacillota
CCT
Arg
>WENV183466067
OMEB01021282
295350
Bacillota
TGC
Ala
>WENV183465766
OMEB01001222
20913
Bacillota
GCT
Ser
>WENV183465495
OMEB01000006
482449
Bacillota
TCC
Gly
>WENV183466090
OMEB01025437
484885
Bacillota
TCC
Gly
>WENV183465836
OMEB01002377
200900
Bacillota
TGG
Pro
>WENV183465866
OMEB01003213
184455
Bacillota
GTC
Asp
>WENV183465748
OMEB01000970
289476
Bacillota
CGT
Thr
>WENV183465801
OMEB01001647
48832
Bacillota
TAA
Leu
>WENV183466094
OMEB01025737
287280
Bacillota
TGT
Thr
>WENV183465696
OMEB01000517
292612
Bacillota
TAC
Val
>WENV183465601
OMEB01000150
56079
Bacillota
AAG
Leu
>WENV183466081
OMEB01023016
292374
Bacillota
TGC
Ala
>WENV183465880
OMEB01003443
403952
Bacillota
CTG
Gln
>WENV183465816
OMEB01001962
404126
Bacillota
GCC
Gly
>WENV183466068
OMEB01021282
186051
Bacillota
GAT
Ile
>WENV183465676
OMEB01000425
117745
Bacillota
GTA
Tyr
>WENV183465759
OMEB01001161
46643
Bacillota
TGA
Ser
>WENV183465881
OMEB01003443
289745
Bacillota
TTT
Lys
>WENV183465941
OMEB01006727
179755
Bacillota
CCG
Arg
>WENV183465646
OMEB01000285
289154
Bacillota
CTT
Lys
>WENV183465914
OMEB01004787
398832
Bacillota
TTC
Glu
>WENV183466139
OMEB01038129
280561
Bacillota
CAT
Met
>WENV183465540
OMEB01000052
280462
Bacillota
GAA
Phe
>WENV183465678
OMEB01000425
280462
Bacillota
GAA
Phe
>WENV183465629
OMEB01000217
398852
Bacillota
CTC
Glu
>WENV183465831
OMEB01002288
398852
Bacillota
CTC
Glu
>WENV183465839
OMEB01002377
404085
Bacillota
CCG
Arg
>WENV183466080
OMEB01023016
201856
Bacillota
GAT
Ile
>WENV183465475
OMEB01000001
312380
Bacillota
TAC
Val
>WENV183465671
OMEB01000403
183995
Bacillota
GGG
Pro
>WENV183465702
OMEB01000523
175857
Bacillota
GTG
His
>WENV183465476
OMEB01000001
285756
Bacillota
GCC
Gly
>WENV183465651
OMEB01000302
184523
Bacillota
GAC
Val
>WENV183465663
OMEB01000349
184523
Bacillota
GAC
Val
>WENV183465581
OMEB01000116
403766
Bacillota
TTG
Gln
>WENV183465679
OMEB01000425
280463
Bacillota
TTT
Lys
>WENV183465704
OMEB01000523
280463
Bacillota
TTT
Lys
>WENV183465634
OMEB01000228
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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