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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183491517
OMGG01022165
178115
Bacillota
CCT
Arg
>WENV183491508
OMGG01020133
368566
Bacillota
GTG
His
>WENV183491438
OMGG01008738
187706
Bacillota
TGG
Pro
>WENV183491313
OMGG01001426
280466
Bacillota
TAC
Val
>WENV183491510
OMGG01021076
25692
Bacillota
CGA
Ser
>WENV183491463
OMGG01012603
184497
Bacillota
GGG
Pro
>WENV183491490
OMGG01016846
215243
Bacillota
CAT
Met
>WENV183491348
OMGG01002100
312274
Bacillota
GGC
Ala
>WENV183491305
OMGG01001291
186123
Bacillota
GTC
Asp
>WENV183491311
OMGG01001397
481217
Bacillota
GCA
Cys
>WENV183491212
OMGG01000481
407726
Bacillota
CTG
Gln
>WENV183491337
OMGG01001868
407726
Bacillota
CTG
Gln
>WENV183491070
OMGG01000076
398835
Bacillota
GCC
Gly
>WENV183491312
OMGG01001426
290325
Bacillota
GCC
Gly
>WENV183491485
OMGG01016074
332181
Bacillota
TGT
Thr
>WENV183491167
OMGG01000297
303552
Bacillota
GTT
Asn
>WENV183491306
OMGG01001291
291634
Bacillota
GAA
Phe
>WENV183491398
OMGG01005378
346451
Bacillota
TTT
Lys
>WENV183491513
OMGG01021655
179245
Bacillota
GTC
Asp
>WENV183491388
OMGG01004722
295350
Bacillota
TGC
Ala
>WENV183491316
OMGG01001426
137739
Bacillota
TAG
Leu
>WENV183491437
OMGG01008738
238199
Bacillota
ACG
Arg
>WENV183491472
OMGG01014556
481235
Bacillota
GCA
Cys
>WENV183491509
OMGG01021007
114298
Bacillota
CAG
Leu
>WENV183491427
OMGG01008102
484885
Bacillota
TCC
Gly
>WENV183491451
OMGG01010486
401685
Bacillota
TTG
Gln
>WENV183491205
OMGG01000459
303718
Bacillota
TGT
Thr
>WENV183491170
OMGG01000303
73638
Bacillota
AAG
Leu
>WENV183491469
OMGG01013750
179243
Bacillota
CGG
Pro
>WENV183491496
OMGG01017566
292374
Bacillota
TGC
Ala
>WENV183491310
OMGG01001397
398857
Bacillota
TTC
Glu
>WENV183491461
OMGG01012596
204381
Bacillota
GAT
Ile
>WENV183491465
OMGG01013021
481236
Bacillota
CCC
Gly
>WENV183491434
OMGG01008738
118363
Bacillota
TAG
Leu
>WENV183491454
OMGG01010511
46835
Bacillota
TAA
Leu
>WENV183491452
OMGG01010486
309916
Bacillota
TTT
Lys
>WENV183491495
OMGG01017566
201856
Bacillota
GAT
Ile
>WENV183491488
OMGG01016074
289123
Bacillota
GGT
Thr
>WENV183491429
OMGG01008225
285601
Bacillota
TTC
Glu
>WENV183491484
OMGG01015663
280486
Bacillota
TGC
Ala
>WENV183491340
OMGG01001915
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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