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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183506829
OMGY01003313
377363
Bacillota
GAA
Phe
>WENV183506927
OMGY01004313
377363
Bacillota
GAA
Phe
>WENV183506917
OMGY01004231
99852
Bacillota
GTA
Tyr
>WENV183507830
OMGY01080982
280870
Bacillota
TGC
Ala
>WENV183507269
OMGY01013354
343590
Bacillota
GCC
Gly
>WENV183507687
OMGY01048653
280500
Bacillota
TGC
Ala
>WENV183506915
OMGY01004231
349107
Bacillota
GCC
Gly
>WENV183506929
OMGY01004372
349107
Bacillota
GCC
Gly
>WENV183507090
OMGY01007414
349107
Bacillota
GCC
Gly
>WENV183506788
OMGY01002918
480520
Bacillota
TCC
Gly
>WENV183506916
OMGY01004231
405363
Bacillota
GCA
Cys
>WENV183506640
OMGY01001767
444314
Bacillota
GTT
Asn
>WENV183506914
OMGY01004231
280428
Bacillota
GAA
Phe
>WENV183507089
OMGY01007414
280428
Bacillota
GAA
Phe
>WENV183506414
OMGY01000817
141454
Bacillota
TAG
Leu
>WENV183506268
OMGY01000450
176678
Bacillota
GTC
Asp
>WENV183506064
OMGY01000084
280492
Bacillota
CTT
Lys
>WENV183506501
OMGY01001051
280492
Bacillota
CTT
Lys
>WENV183506417
OMGY01000817
280642
Bacillota
TTG
Gln
>WENV183506774
OMGY01002842
175842
Bacillota
CAC
Val
>WENV183506418
OMGY01000817
280639
Bacillota
TTT
Lys
>WENV183507480
OMGY01024929
291629
Bacillota
CCA
Trp
>WENV183506327
OMGY01000614
236579
Bacillota
GAT
Ile
>WENV183506333
OMGY01000618
184497
Bacillota
GGG
Pro
>WENV183506597
OMGY01001537
184497
Bacillota
GGG
Pro
>WENV183506800
OMGY01003026
184497
Bacillota
GGG
Pro
>WENV183506836
OMGY01003440
184497
Bacillota
GGG
Pro
>WENV183507379
OMGY01018246
296941
Bacillota
TGC
Ala
>WENV183506942
OMGY01004484
298270
Bacillota
TAC
Val
>WENV183506421
OMGY01000817
176018
Bacillota
CAT
Met
>WENV183507868
OMGY01093372
179661
Bacillota
CAT
Met
>WENV183506200
OMGY01000291
376224
Bacillota
TGG
Pro
>WENV183506282
OMGY01000482
179176
Bacillota
ACG
Arg
>WENV183506730
OMGY01002273
179176
Bacillota
ACG
Arg
>WENV183506326
OMGY01000614
295166
Bacillota
TGC
Ala
>WENV183506825
OMGY01003277
190476
Bacillota
CAT
Met
>WENV183506416
OMGY01000817
176014
Bacillota
TCT
Arg
>WENV183506415
OMGY01000817
398916
Bacillota
>WENV183506255
OMGY01000413
73664
Bacillota
CAG
Leu
>WENV183507019
OMGY01006225
280447
Bacillota
GAC
Val
>WENV183507182
OMGY01010025
280447
Bacillota
GAC
Val
>WENV183507362
OMGY01017602
280447
Bacillota
GAC
Val
>WENV183506484
OMGY01001009
5692
Bacillota
GCT
Ser
>WENV183507355
OMGY01017510
5692
Bacillota
GCT
Ser
>WENV183507878
OMGY01099000
312274
Bacillota
GGC
Ala
>WENV183507477
OMGY01024929
186123
Bacillota
GTC
Asp
>WENV183507007
OMGY01006038
280427
Bacillota
TAC
Val
>WENV183506290
OMGY01000495
284723
Bacillota
TAC
Val
>WENV183507144
OMGY01008802
73009
Bacillota
CAG
Leu
>WENV183507198
OMGY01010629
73009
Bacillota
CAG
Leu
>WENV183507363
OMGY01017693
73009
Bacillota
CAG
Leu
>WENV183506955
OMGY01004684
73009
Bacillota
CAG
Leu
>WENV183506745
OMGY01002436
481217
Bacillota
GCA
Cys
>WENV183506639
OMGY01001767
399266
Bacillota
>WENV183506007
OMGY01000042
280646
Bacillota
TGC
Ala
>WENV183507403
OMGY01019770
281417
Bacillota
GTC
Asp
>WENV183506806
OMGY01003034
291581
Bacillota
CGG
Pro
>WENV183507335
OMGY01016122
291581
Bacillota
CGG
Pro
>WENV183507428
OMGY01021172
291581
Bacillota
CGG
Pro
>WENV183506807
OMGY01003041
175859
Bacillota
TCT
Arg
>WENV183507093
OMGY01007454
175859
Bacillota
TCT
Arg
>WENV183507244
OMGY01012344
175859
Bacillota
TCT
Arg
>WENV183506777
OMGY01002855
330433
Bacillota
GTG
His
>WENV183507258
OMGY01013032
280641
Bacillota
GTT
Asn
>WENV183505954
OMGY01000013
290325
Bacillota
GCC
Gly
>WENV183507845
OMGY01083969
175831
Bacillota
ACG
Arg
>WENV183507217
OMGY01011385
187589
Bacillota
CAT
Met
>WENV183506666
OMGY01001952
284627
Bacillota
GAA
Phe
>WENV183507599
OMGY01036131
284627
Bacillota
GAA
Phe
>WENV183506411
OMGY01000815
281305
Bacillota
CAT
Met
>WENV183506423
OMGY01000817
176015
Bacillota
TGG
Pro
>WENV183507478
OMGY01024929
291634
Bacillota
GAA
Phe
>WENV183506514
OMGY01001134
399041
Bacillota
CCA
Trp
>WENV183507466
OMGY01024268
137739
Bacillota
TAG
Leu
>WENV183506711
OMGY01002197
27216
Bacillota
GCT
Ser
>WENV183506667
OMGY01001952
484885
Bacillota
TCC
Gly
>WENV183506805
OMGY01003034
480322
Bacillota
CTG
Gln
>WENV183506874
OMGY01003790
480322
Bacillota
CTG
Gln
>WENV183507073
OMGY01007201
480322
Bacillota
CTG
Gln
>WENV183507334
OMGY01016122
480322
Bacillota
CTG
Gln
>WENV183507427
OMGY01021172
480322
Bacillota
CTG
Gln
>WENV183507232
OMGY01012033
399272
Bacillota
GCA
Cys
>WENV183506897
OMGY01004049
187364
Bacillota
CAT
Met
>WENV183506762
OMGY01002628
141533
Bacillota
CAA
Leu
>WENV183506595
OMGY01001511
175868
Bacillota
GTT
Asn
>WENV183506307
OMGY01000536
120584
Bacillota
GTA
Tyr
>WENV183507716
OMGY01052721
291576
Bacillota
CCC
Gly
>WENV183506648
OMGY01001883
480324
Bacillota
TTG
Gln
>WENV183507086
OMGY01007369
480324
Bacillota
TTG
Gln
>WENV183506596
OMGY01001525
497729
Bacillota
CCA
Trp
>WENV183506725
OMGY01002250
497729
Bacillota
CCA
Trp
>WENV183506812
OMGY01003093
497729
Bacillota
CCA
Trp
>WENV183506814
OMGY01003123
497729
Bacillota
CCA
Trp
>WENV183506963
OMGY01004826
497729
Bacillota
CCA
Trp
>WENV183507591
OMGY01035041
175899
Bacillota
GTC
Asp
>WENV183507583
OMGY01033849
303718
Bacillota
TGT
Thr
>WENV183506966
OMGY01004952
73638
Bacillota
AAG
Leu
>WENV183506254
OMGY01000413
56079
Bacillota
AAG
Leu
>WENV183506378
OMGY01000700
56079
Bacillota
AAG
Leu
>WENV183506424
OMGY01000817
176019
Bacillota
GTG
His
>WENV183507412
OMGY01020121
398857
Bacillota
TTC
Glu
>WENV183506168
OMGY01000237
117745
Bacillota
GTA
Tyr
>WENV183506763
OMGY01002632
280444
Bacillota
GGT
Thr
>WENV183507184
OMGY01010122
280444
Bacillota
GGT
Thr
>WENV183506910
OMGY01004161
483485
Bacillota
CCC
Gly
>WENV183506779
OMGY01002855
354380
Bacillota
TTT
Lys
>WENV183506407
OMGY01000806
291597
Bacillota
TGC
Ala
>WENV183507345
OMGY01016765
413969
Bacillota
TTC
Glu
>WENV183506996
OMGY01005703
179755
Bacillota
CCG
Arg
>WENV183507023
OMGY01006341
179755
Bacillota
CCG
Arg
>WENV183507243
OMGY01012274
179755
Bacillota
CCG
Arg
>WENV183506826
OMGY01003277
398832
Bacillota
TTC
Glu
>WENV183507734
OMGY01057120
25955
Bacillota
GCT
Ser
>WENV183506776
OMGY01002855
203851
Bacillota
TCT
Arg
>WENV183506266
OMGY01000450
449573
Bacillota
>WENV183506241
OMGY01000386
280462
Bacillota
GAA
Phe
>WENV183506445
OMGY01000873
398852
Bacillota
CTC
Glu
>WENV183506837
OMGY01003442
398852
Bacillota
CTC
Glu
>WENV183506838
OMGY01003442
398852
Bacillota
CTC
Glu
>WENV183506412
OMGY01000817
399260
Bacillota
TGT
Thr
>WENV183506872
OMGY01003789
118359
Bacillota
GTA
Tyr
>WENV183507747
OMGY01060864
201856
Bacillota
GAT
Ile
>WENV183506859
OMGY01003698
175857
Bacillota
GTG
His
>WENV183506883
OMGY01003925
398833
Bacillota
TGT
Thr
>WENV183506948
OMGY01004541
398833
Bacillota
TGT
Thr
>WENV183506432
OMGY01000827
175849
Bacillota
GTC
Asp
>WENV183507479
OMGY01024929
405393
Bacillota
GCC
Gly
>WENV183507806
OMGY01073906
288728
Bacillota
TGC
Ala
>WENV183506483
OMGY01001009
56074
Bacillota
TGA
Ser
>WENV183507354
OMGY01017510
56074
Bacillota
TGA
Ser
>WENV183507031
OMGY01006467
280473
Bacillota
TGG
Pro
>WENV183507140
OMGY01008693
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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