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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183518776
OMNQ01054327
99852
Bacillota
GTA
Tyr
>WENV183518612
OMNQ01017912
280500
Bacillota
TGC
Ala
>WENV183518444
OMNQ01005561
405363
Bacillota
GCA
Cys
>WENV183518459
OMNQ01006182
280428
Bacillota
GAA
Phe
>WENV183518314
OMNQ01002194
179917
Bacillota
CAT
Met
>WENV183518315
OMNQ01002194
302145
Bacillota
GAA
Phe
>WENV183518775
OMNQ01052782
426579
Bacillota
GTT
Asn
>WENV183518144
OMNQ01000104
296941
Bacillota
TGC
Ala
>WENV183518672
OMNQ01027475
179176
Bacillota
ACG
Arg
>WENV183518516
OMNQ01010029
215243
Bacillota
CAT
Met
>WENV183518514
OMNQ01009829
280447
Bacillota
GAC
Val
>WENV183518230
OMNQ01000699
73009
Bacillota
CAG
Leu
>WENV183518538
OMNQ01011217
189473
Bacillota
GAT
Ile
>WENV183518287
OMNQ01001504
291581
Bacillota
CGG
Pro
>WENV183518425
OMNQ01005361
175859
Bacillota
TCT
Arg
>WENV183518211
OMNQ01000386
175831
Bacillota
ACG
Arg
>WENV183518261
OMNQ01001063
294020
Bacillota
TAC
Val
>WENV183518441
OMNQ01005522
294020
Bacillota
TAC
Val
>WENV183518274
OMNQ01001305
480322
Bacillota
CTG
Gln
>WENV183518286
OMNQ01001504
480322
Bacillota
CTG
Gln
>WENV183518482
OMNQ01007595
175868
Bacillota
GTT
Asn
>WENV183518481
OMNQ01007595
398854
Bacillota
CTC
Glu
>WENV183518197
OMNQ01000300
291576
Bacillota
CCC
Gly
>WENV183518233
OMNQ01000736
480324
Bacillota
TTG
Gln
>WENV183518365
OMNQ01003264
280444
Bacillota
GGT
Thr
>WENV183518460
OMNQ01006182
321753
Bacillota
GCC
Gly
>WENV183518368
OMNQ01003331
398832
Bacillota
TTC
Glu
>WENV183518532
OMNQ01010749
289123
Bacillota
GGT
Thr
>WENV183518480
OMNQ01007571
398833
Bacillota
TGT
Thr
>WENV183518364
OMNQ01003264
175849
Bacillota
GTC
Asp
>WENV183518316
OMNQ01002201
280473
Bacillota
TGG
Pro
>WENV183518338
OMNQ01002466
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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