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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560564
OOBU01000123
404076
Bacillota
GCC
Gly
>WENV183560686
OOBU01000382
404076
Bacillota
GCC
Gly
>WENV183560790
OOBU01000796
404076
Bacillota
GCC
Gly
>WENV183561051
OOBU01015832
349107
Bacillota
GCC
Gly
>WENV183560801
OOBU01000834
74057
Bacillota
CAG
Leu
>WENV183560802
OOBU01000834
74057
Bacillota
CAG
Leu
>WENV183560803
OOBU01000834
74057
Bacillota
CAG
Leu
>WENV183560685
OOBU01000382
184504
Bacillota
GTC
Asp
>WENV183560788
OOBU01000796
184504
Bacillota
GTC
Asp
>WENV183560938
OOBU01002636
405363
Bacillota
GCA
Cys
>WENV183561050
OOBU01015832
280428
Bacillota
GAA
Phe
>WENV183561061
OOBU01017618
56397
Bacillota
CAA
Leu
>WENV183561018
OOBU01007082
480359
Bacillota
TCC
Gly
>WENV183561048
OOBU01015832
280466
Bacillota
TAC
Val
>WENV183561020
OOBU01007082
280642
Bacillota
TTG
Gln
>WENV183561044
OOBU01010705
175842
Bacillota
CAC
Val
>WENV183561021
OOBU01007082
280639
Bacillota
TTT
Lys
>WENV183561024
OOBU01007082
176018
Bacillota
CAT
Met
>WENV183560995
OOBU01005692
407852
Bacillota
TTC
Glu
>WENV183560983
OOBU01004263
285947
Bacillota
CTG
Gln
>WENV183560527
OOBU01000075
404079
Bacillota
CAT
Met
>WENV183560794
OOBU01000819
190476
Bacillota
CAT
Met
>WENV183561019
OOBU01007082
176014
Bacillota
TCT
Arg
>WENV183560887
OOBU01001875
280447
Bacillota
GAC
Val
>WENV183561027
OOBU01007082
480360
Bacillota
GCA
Cys
>WENV183560981
OOBU01004191
400139
Bacillota
TTG
Gln
>WENV183560862
OOBU01001577
73009
Bacillota
CAG
Leu
>WENV183560911
OOBU01002381
73009
Bacillota
CAG
Leu
>WENV183560956
OOBU01003172
283738
Bacillota
CGT
Thr
>WENV183560819
OOBU01000977
175859
Bacillota
TCT
Arg
>WENV183560921
OOBU01002494
175831
Bacillota
ACG
Arg
>WENV183560499
OOBU01000036
183957
Bacillota
CCT
Arg
>WENV183560701
OOBU01000416
327598
Bacillota
CTT
Lys
>WENV183560940
OOBU01002683
282731
Bacillota
GTG
His
>WENV183560858
OOBU01001526
480322
Bacillota
CTG
Gln
>WENV183560883
OOBU01001852
398854
Bacillota
CTC
Glu
>WENV183560906
OOBU01002254
480324
Bacillota
TTG
Gln
>WENV183560809
OOBU01000888
400600
Bacillota
TTG
Gln
>WENV183561026
OOBU01007082
176019
Bacillota
GTG
His
>WENV183561055
OOBU01016661
291597
Bacillota
TGC
Ala
>WENV183560899
OOBU01002118
179755
Bacillota
CCG
Arg
>WENV183560795
OOBU01000819
398832
Bacillota
TTC
Glu
>WENV183560980
OOBU01004191
114009
Bacillota
GTA
Tyr
>WENV183560960
OOBU01003214
369718
Bacillota
CTC
Glu
>WENV183560861
OOBU01001572
398833
Bacillota
TGT
Thr
>WENV183561049
OOBU01015832
175849
Bacillota
GTC
Asp
>WENV183560851
OOBU01001390
156219
Bacillota
GTG
His
>WENV183560945
OOBU01002797
56074
Bacillota
TGA
Ser
>WENV183560625
OOBU01000231
482078
Bacillota
CCC
Gly
>WENV183560813
OOBU01000929
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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