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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183574541
OOCH01024051
99852
Bacillota
GTA
Tyr
>WENV183574585
OOCH01029948
280500
Bacillota
TGC
Ala
>WENV183574689
OOCH01053176
480520
Bacillota
TCC
Gly
>WENV183574307
OOCH01006855
405363
Bacillota
GCA
Cys
>WENV183574674
OOCH01048652
444314
Bacillota
GTT
Asn
>WENV183574623
OOCH01034121
290391
Bacillota
TAC
Val
>WENV183573476
OOCH01000108
176678
Bacillota
GTC
Asp
>WENV183574101
OOCH01002705
284746
Bacillota
CTG
Gln
>WENV183573873
OOCH01001139
280492
Bacillota
CTT
Lys
>WENV183574309
OOCH01006892
175842
Bacillota
CAC
Val
>WENV183574733
OOCH01068164
236579
Bacillota
GAT
Ile
>WENV183573745
OOCH01000625
348419
Bacillota
GTT
Asn
>WENV183574377
OOCH01009983
184497
Bacillota
GGG
Pro
>WENV183574686
OOCH01052729
179176
Bacillota
ACG
Arg
>WENV183574041
OOCH01002129
190476
Bacillota
CAT
Met
>WENV183574096
OOCH01002667
190476
Bacillota
CAT
Met
>WENV183574343
OOCH01008228
73664
Bacillota
CAG
Leu
>WENV183574171
OOCH01003436
280447
Bacillota
GAC
Val
>WENV183574399
OOCH01011163
280447
Bacillota
GAC
Val
>WENV183573768
OOCH01000716
5692
Bacillota
GCT
Ser
>WENV183574287
OOCH01006148
5692
Bacillota
GCT
Ser
>WENV183574554
OOCH01026022
175825
Bacillota
GAT
Ile
>WENV183573907
OOCH01001345
73009
Bacillota
CAG
Leu
>WENV183574222
OOCH01004240
73009
Bacillota
CAG
Leu
>WENV183574254
OOCH01005268
73009
Bacillota
CAG
Leu
>WENV183574267
OOCH01005487
73009
Bacillota
CAG
Leu
>WENV183574409
OOCH01011596
73009
Bacillota
CAG
Leu
>WENV183574228
OOCH01004375
481217
Bacillota
GCA
Cys
>WENV183573878
OOCH01001167
291581
Bacillota
CGG
Pro
>WENV183574265
OOCH01005464
291581
Bacillota
CGG
Pro
>WENV183574367
OOCH01009269
291581
Bacillota
CGG
Pro
>WENV183573962
OOCH01001706
175859
Bacillota
TCT
Arg
>WENV183574553
OOCH01026022
280436
Bacillota
TGC
Ala
>WENV183574692
OOCH01053176
330433
Bacillota
GTG
His
>WENV183574726
OOCH01065033
175831
Bacillota
ACG
Arg
>WENV183573720
OOCH01000561
480322
Bacillota
CTG
Gln
>WENV183573877
OOCH01001167
480322
Bacillota
CTG
Gln
>WENV183574264
OOCH01005464
480322
Bacillota
CTG
Gln
>WENV183574271
OOCH01005611
480322
Bacillota
CTG
Gln
>WENV183574366
OOCH01009269
480322
Bacillota
CTG
Gln
>WENV183573930
OOCH01001413
401685
Bacillota
TTG
Gln
>WENV183573830
OOCH01000961
175868
Bacillota
GTT
Asn
>WENV183574232
OOCH01004473
175868
Bacillota
GTT
Asn
>WENV183574148
OOCH01003243
284744
Bacillota
TTT
Lys
>WENV183573478
OOCH01000108
120584
Bacillota
GTA
Tyr
>WENV183574079
OOCH01002421
291576
Bacillota
CCC
Gly
>WENV183574170
OOCH01003430
291576
Bacillota
CCC
Gly
>WENV183573759
OOCH01000686
480324
Bacillota
TTG
Gln
>WENV183574022
OOCH01002051
480324
Bacillota
TTG
Gln
>WENV183573952
OOCH01001609
497729
Bacillota
CCA
Trp
>WENV183573749
OOCH01000625
175899
Bacillota
GTC
Asp
>WENV183573707
OOCH01000522
303718
Bacillota
TGT
Thr
>WENV183574491
OOCH01017539
56079
Bacillota
AAG
Leu
>WENV183573746
OOCH01000625
398857
Bacillota
TTC
Glu
>WENV183574648
OOCH01040047
204381
Bacillota
GAT
Ile
>WENV183574159
OOCH01003330
117745
Bacillota
GTA
Tyr
>WENV183573942
OOCH01001547
280444
Bacillota
GGT
Thr
>WENV183574112
OOCH01002790
280444
Bacillota
GGT
Thr
>WENV183574581
OOCH01029569
280444
Bacillota
GGT
Thr
>WENV183574694
OOCH01053176
354380
Bacillota
TTT
Lys
>WENV183574116
OOCH01002845
179755
Bacillota
CCG
Arg
>WENV183574209
OOCH01003844
179755
Bacillota
CCG
Arg
>WENV183574460
OOCH01015255
179755
Bacillota
CCG
Arg
>WENV183574464
OOCH01015454
179755
Bacillota
CCG
Arg
>WENV183574149
OOCH01003243
401111
Bacillota
TTC
Glu
>WENV183574253
OOCH01005120
58120
Bacillota
AAG
Leu
>WENV183574042
OOCH01002129
398832
Bacillota
TTC
Glu
>WENV183574097
OOCH01002667
398832
Bacillota
TTC
Glu
>WENV183574690
OOCH01053176
203851
Bacillota
TCT
Arg
>WENV183573380
OOCH01000012
118669
Bacillota
GTA
Tyr
>WENV183573418
OOCH01000056
398852
Bacillota
CTC
Glu
>WENV183573419
OOCH01000056
398852
Bacillota
CTC
Glu
>WENV183573420
OOCH01000056
398852
Bacillota
CTC
Glu
>WENV183573836
OOCH01001000
398852
Bacillota
CTC
Glu
>WENV183574418
OOCH01012247
118359
Bacillota
GTA
Tyr
>WENV183574717
OOCH01061392
201856
Bacillota
GAT
Ile
>WENV183573475
OOCH01000108
312380
Bacillota
TAC
Val
>WENV183574132
OOCH01003048
280483
Bacillota
GAA
Phe
>WENV183573643
OOCH01000352
298260
Bacillota
GTT
Asn
>WENV183574029
OOCH01002096
285601
Bacillota
TTC
Glu
>WENV183573929
OOCH01001413
175857
Bacillota
GTG
His
>WENV183574133
OOCH01003048
285756
Bacillota
GCC
Gly
>WENV183574484
OOCH01016976
398833
Bacillota
TGT
Thr
>WENV183573767
OOCH01000716
56074
Bacillota
TGA
Ser
>WENV183574286
OOCH01006148
56074
Bacillota
TGA
Ser
>WENV183574158
OOCH01003319
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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