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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183643523
OQVO01025723
56079
Bacillota
AAG
Leu
>WENV183643277
OQVO01005813
212982
Bacillota
ACG
Arg
>WENV183643319
OQVO01007486
175831
Bacillota
ACG
Arg
>WENV183643399
OQVO01011698
175842
Bacillota
CAC
Val
>WENV183643209
OQVO01003808
73664
Bacillota
CAG
Leu
>WENV183643049
OQVO01000870
73009
Bacillota
CAG
Leu
>WENV183643171
OQVO01002743
190476
Bacillota
CAT
Met
>WENV183643590
OQVO01034567
497729
Bacillota
CCA
Trp
>WENV183643067
OQVO01001138
402739
Bacillota
CCG
Arg
>WENV183643299
OQVO01006546
179755
Bacillota
CCG
Arg
>WENV183643641
OQVO01044115
291581
Bacillota
CGG
Pro
>WENV183643237
OQVO01004940
398854
Bacillota
CTC
Glu
>WENV183643020
OQVO01000619
398852
Bacillota
CTC
Glu
>WENV183643640
OQVO01044115
480322
Bacillota
CTG
Gln
>WENV183643205
OQVO01003441
280492
Bacillota
CTT
Lys
>WENV183643552
OQVO01029556
360353
Bacillota
CTT
Lys
>WENV183643296
OQVO01006370
280428
Bacillota
GAA
Phe
>WENV183643040
OQVO01000851
338033
Bacillota
GAA
Phe
>WENV183643131
OQVO01001964
280462
Bacillota
GAA
Phe
>WENV183643045
OQVO01000851
110240
Bacillota
GAG
Leu
>WENV183643298
OQVO01006509
234991
Bacillota
GAT
Ile
>WENV183643281
OQVO01005909
189473
Bacillota
GAT
Ile
>WENV183643475
OQVO01019737
204381
Bacillota
GAT
Ile
>WENV183643125
OQVO01001804
405363
Bacillota
GCA
Cys
>WENV183643116
OQVO01001651
285756
Bacillota
GCC
Gly
>WENV183643436
OQVO01014546
5692
Bacillota
GCT
Ser
>WENV183643218
OQVO01003967
280444
Bacillota
GGT
Thr
>WENV183643236
OQVO01004939
117745
Bacillota
GTA
Tyr
>WENV183643583
OQVO01033470
180688
Bacillota
GTC
Asp
>WENV183643039
OQVO01000851
179935
Bacillota
GTC
Asp
>WENV183643098
OQVO01001457
175868
Bacillota
GTT
Asn
>WENV183643584
OQVO01033470
290391
Bacillota
TAC
Val
>WENV183643287
OQVO01006133
342104
Bacillota
TAC
Val
>WENV183643675
OQVO01051565
175859
Bacillota
TCT
Arg
>WENV183643435
OQVO01014546
56074
Bacillota
TGA
Ser
>WENV183643303
OQVO01006706
280473
Bacillota
TGG
Pro
>WENV183643386
OQVO01010715
398833
Bacillota
TGT
Thr
>WENV183643356
OQVO01008858
409321
Bacillota
TTC
Glu
>WENV183643172
OQVO01002743
398832
Bacillota
TTC
Glu
>WENV183643266
OQVO01005794
480324
Bacillota
TTG
Gln
>WENV183643654
OQVO01046735
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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