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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183649677
OQVT01003721
343590
Bacillota
GCC
Gly
>WENV183649821
OQVT01005787
343590
Bacillota
GCC
Gly
>WENV183650820
OQVT01043092
280500
Bacillota
TGC
Ala
>WENV183649630
OQVT01003276
405363
Bacillota
GCA
Cys
>WENV183650655
OQVT01033458
424916
Bacillota
GCC
Gly
>WENV183650016
OQVT01008885
280428
Bacillota
GAA
Phe
>WENV183650782
OQVT01040582
280428
Bacillota
GAA
Phe
>WENV183651068
OQVT01069249
426579
Bacillota
GTT
Asn
>WENV183649293
OQVT01000447
280492
Bacillota
CTT
Lys
>WENV183650622
OQVT01031721
175842
Bacillota
CAC
Val
>WENV183650107
OQVT01011146
184497
Bacillota
GGG
Pro
>WENV183650189
OQVT01012999
184497
Bacillota
GGG
Pro
>WENV183651100
OQVT01073328
179563
Bacillota
GAT
Ile
>WENV183649740
OQVT01004661
179176
Bacillota
ACG
Arg
>WENV183649870
OQVT01006558
179176
Bacillota
ACG
Arg
>WENV183650550
OQVT01027613
295166
Bacillota
TGC
Ala
>WENV183651077
OQVT01069963
295166
Bacillota
TGC
Ala
>WENV183651113
OQVT01076185
141334
Bacillota
TAG
Leu
>WENV183649996
OQVT01008577
215243
Bacillota
CAT
Met
>WENV183649695
OQVT01004016
190476
Bacillota
CAT
Met
>WENV183650162
OQVT01012425
280447
Bacillota
GAC
Val
>WENV183650566
OQVT01028202
280447
Bacillota
GAC
Val
>WENV183650535
OQVT01026328
409321
Bacillota
TTC
Glu
>WENV183651169
OQVT01085739
409321
Bacillota
TTC
Glu
>WENV183650151
OQVT01012072
5692
Bacillota
GCT
Ser
>WENV183651186
OQVT01088802
186123
Bacillota
GTC
Asp
>WENV183650428
OQVT01021856
73009
Bacillota
CAG
Leu
>WENV183650211
OQVT01014014
481217
Bacillota
GCA
Cys
>WENV183651118
OQVT01076185
283502
Bacillota
TTT
Lys
>WENV183651297
OQVT01118131
402717
Bacillota
TTC
Glu
>WENV183651079
OQVT01069992
399266
Bacillota
>WENV183651181
OQVT01088358
280646
Bacillota
TGC
Ala
>WENV183650182
OQVT01012985
338033
Bacillota
GAA
Phe
>WENV183649527
OQVT01002231
291581
Bacillota
CGG
Pro
>WENV183650254
OQVT01015573
291581
Bacillota
CGG
Pro
>WENV183650884
OQVT01048311
175859
Bacillota
TCT
Arg
>WENV183650749
OQVT01038074
175847
Bacillota
GTC
Asp
>WENV183651411
OQVT01151783
175831
Bacillota
ACG
Arg
>WENV183649451
OQVT01001462
284627
Bacillota
GAA
Phe
>WENV183651187
OQVT01088802
291634
Bacillota
GAA
Phe
>WENV183649697
OQVT01004037
346451
Bacillota
TTT
Lys
>WENV183650654
OQVT01033458
176657
Bacillota
GTC
Asp
>WENV183649526
OQVT01002231
480322
Bacillota
CTG
Gln
>WENV183650040
OQVT01009723
480322
Bacillota
CTG
Gln
>WENV183650253
OQVT01015573
480322
Bacillota
CTG
Gln
>WENV183649646
OQVT01003391
401685
Bacillota
TTG
Gln
>WENV183651314
OQVT01122288
175868
Bacillota
GTT
Asn
>WENV183650974
OQVT01056760
291576
Bacillota
CCC
Gly
>WENV183651402
OQVT01149790
480324
Bacillota
TTG
Gln
>WENV183650193
OQVT01013224
497729
Bacillota
CCA
Trp
>WENV183650514
OQVT01025300
56079
Bacillota
AAG
Leu
>WENV183651094
OQVT01072556
484479
Bacillota
GCA
Cys
>WENV183650181
OQVT01012985
179935
Bacillota
GTC
Asp
>WENV183650618
OQVT01031613
186051
Bacillota
GAT
Ile
>WENV183650155
OQVT01012320
398857
Bacillota
TTC
Glu
>WENV183649892
OQVT01006775
204381
Bacillota
GAT
Ile
>WENV183650255
OQVT01015604
204381
Bacillota
GAT
Ile
>WENV183649652
OQVT01003450
280444
Bacillota
GGT
Thr
>WENV183650676
OQVT01034590
280444
Bacillota
GGT
Thr
>WENV183650683
OQVT01034756
280444
Bacillota
GGT
Thr
>WENV183650623
OQVT01031728
281445
Bacillota
GTG
His
>WENV183650600
OQVT01030549
179755
Bacillota
CCG
Arg
>WENV183650625
OQVT01031902
58120
Bacillota
AAG
Leu
>WENV183651093
OQVT01072556
344985
Bacillota
GAA
Phe
>WENV183649696
OQVT01004016
398832
Bacillota
TTC
Glu
>WENV183651115
OQVT01076185
203851
Bacillota
TCT
Arg
>WENV183649868
OQVT01006552
118669
Bacillota
GTA
Tyr
>WENV183650970
OQVT01056511
175915
Bacillota
GTC
Asp
>WENV183650077
OQVT01010707
280462
Bacillota
GAA
Phe
>WENV183651220
OQVT01097145
201856
Bacillota
GAT
Ile
>WENV183649681
OQVT01003806
289123
Bacillota
GGT
Thr
>WENV183649411
OQVT01001192
321248
Bacillota
TAC
Val
>WENV183650081
OQVT01010775
280483
Bacillota
GAA
Phe
>WENV183650983
OQVT01059083
298260
Bacillota
GTT
Asn
>WENV183649645
OQVT01003391
175857
Bacillota
GTG
His
>WENV183650049
OQVT01009934
398833
Bacillota
TGT
Thr
>WENV183649651
OQVT01003450
175849
Bacillota
GTC
Asp
>WENV183650675
OQVT01034590
175849
Bacillota
GTC
Asp
>WENV183650682
OQVT01034756
175849
Bacillota
GTC
Asp
>WENV183649548
OQVT01002504
317820
Bacillota
TAC
Val
>WENV183650163
OQVT01012446
317820
Bacillota
TAC
Val
>WENV183650443
OQVT01022469
405393
Bacillota
GCC
Gly
>WENV183650150
OQVT01012072
56074
Bacillota
TGA
Ser
>WENV183649589
OQVT01002929
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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