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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183655625
OQWD01040327
405363
Bacillota
GCA
Cys
>WENV183655132
OQWD01006495
280428
Bacillota
GAA
Phe
>WENV183654929
OQWD01002169
175842
Bacillota
CAC
Val
>WENV183655158
OQWD01007271
313596
Bacillota
TAC
Val
>WENV183654739
OQWD01000502
184497
Bacillota
GGG
Pro
>WENV183654851
OQWD01001230
184497
Bacillota
GGG
Pro
>WENV183654604
OQWD01000045
179176
Bacillota
ACG
Arg
>WENV183654864
OQWD01001336
179176
Bacillota
ACG
Arg
>WENV183655271
OQWD01011032
215243
Bacillota
CAT
Met
>WENV183655376
OQWD01015763
354475
Bacillota
GAA
Phe
>WENV183655575
OQWD01033724
284506
Bacillota
CCA
Trp
>WENV183655107
OQWD01005703
73664
Bacillota
CAG
Leu
>WENV183655051
OQWD01004604
280447
Bacillota
GAC
Val
>WENV183655174
OQWD01007657
186123
Bacillota
GTC
Asp
>WENV183654900
OQWD01001784
73009
Bacillota
CAG
Leu
>WENV183654577
OQWD01000004
407840
Bacillota
TTC
Glu
>WENV183654846
OQWD01001175
291581
Bacillota
CGG
Pro
>WENV183655194
OQWD01008350
175859
Bacillota
TCT
Arg
>WENV183655019
OQWD01003828
175831
Bacillota
ACG
Arg
>WENV183654952
OQWD01002351
294020
Bacillota
TAC
Val
>WENV183655634
OQWD01042215
178152
Bacillota
GTT
Asn
>WENV183655732
OQWD01064848
179706
Bacillota
CAT
Met
>WENV183655340
OQWD01014609
137739
Bacillota
TAG
Leu
>WENV183654655
OQWD01000165
27216
Bacillota
GCT
Ser
>WENV183655649
OQWD01047258
484885
Bacillota
TCC
Gly
>WENV183654759
OQWD01000553
480322
Bacillota
CTG
Gln
>WENV183654845
OQWD01001175
480322
Bacillota
CTG
Gln
>WENV183654741
OQWD01000504
175868
Bacillota
GTT
Asn
>WENV183655179
OQWD01007787
175868
Bacillota
GTT
Asn
>WENV183655178
OQWD01007787
398854
Bacillota
CTC
Glu
>WENV183655118
OQWD01005941
480324
Bacillota
TTG
Gln
>WENV183654745
OQWD01000533
497729
Bacillota
CCA
Trp
>WENV183654823
OQWD01000990
497729
Bacillota
CCA
Trp
>WENV183654652
OQWD01000163
303718
Bacillota
TGT
Thr
>WENV183655106
OQWD01005703
56079
Bacillota
AAG
Leu
>WENV183655515
OQWD01026960
292374
Bacillota
TGC
Ala
>WENV183655462
OQWD01022288
398857
Bacillota
TTC
Glu
>WENV183655385
OQWD01016116
223045
Bacillota
GAT
Ile
>WENV183654586
OQWD01000013
235661
Bacillota
GTC
Asp
>WENV183655159
OQWD01007271
235661
Bacillota
GTC
Asp
>WENV183655299
OQWD01012873
25955
Bacillota
GCT
Ser
>WENV183655347
OQWD01014609
228403
Bacillota
CAT
Met
>WENV183655320
OQWD01013419
118669
Bacillota
GTA
Tyr
>WENV183654939
OQWD01002275
52748
Bacillota
TGA
Ser
>WENV183654927
OQWD01002152
280462
Bacillota
GAA
Phe
>WENV183654784
OQWD01000708
398852
Bacillota
CTC
Glu
>WENV183654832
OQWD01001072
118359
Bacillota
GTA
Tyr
>WENV183655514
OQWD01026960
201856
Bacillota
GAT
Ile
>WENV183655706
OQWD01060451
289123
Bacillota
GGT
Thr
>WENV183655162
OQWD01007271
444984
Bacillota
GCC
Gly
>WENV183654899
OQWD01001779
285756
Bacillota
GCC
Gly
>WENV183655073
OQWD01004943
398833
Bacillota
TGT
Thr
>WENV183654928
OQWD01002152
280463
Bacillota
TTT
Lys
>WENV183655364
OQWD01015380
56074
Bacillota
TGA
Ser
>WENV183654988
OQWD01003213
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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