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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183745470
POVV01000028
280708
Bacillota
TAC
Val
>WENV183745480
POVV01000031
291579
Bacillota
GAA
Phe
>WENV183745476
POVV01000031
294020
Bacillota
TAC
Val
>WENV183745477
POVV01000031
120213
Bacillota
GTA
Tyr
>WENV183745475
POVV01000031
175915
Bacillota
GTC
Asp
>WENV183745481
POVV01000031
280476
Bacillota
TTT
Lys
>WENV183745489
POVV01000033
280708
Bacillota
TAC
Val
>WENV183745485
POVV01000033
398857
Bacillota
TTC
Glu
>WENV183745495
POVV01000033
175857
Bacillota
GTG
His
>WENV183745523
POVV01000059
398857
Bacillota
TTC
Glu
>WENV183745537
POVV01000071
294020
Bacillota
TAC
Val
>WENV183745580
POVV01000103
302145
Bacillota
GAA
Phe
>WENV183745582
POVV01000103
283367
Bacillota
GCC
Gly
>WENV183745588
POVV01000116
280708
Bacillota
TAC
Val
>WENV183745589
POVV01000116
284476
Bacillota
TGT
Thr
>WENV183745608
POVV01000156
399152
Bacillota
GCC
Gly
>WENV183745612
POVV01000156
399152
Bacillota
GCC
Gly
>WENV183745609
POVV01000156
281076
Bacillota
CCA
Trp
>WENV183745613
POVV01000156
400371
Bacillota
GCA
Cys
>WENV183745621
POVV01000164
294020
Bacillota
TAC
Val
>WENV183745622
POVV01000164
46835
Bacillota
TAA
Leu
>WENV183745620
POVV01000164
175915
Bacillota
GTC
Asp
>WENV183745639
POVV01000190
333281
Bacillota
GTT
Asn
>WENV183745703
POVV01000394
58120
Bacillota
AAG
Leu
>WENV183745712
POVV01000413
283367
Bacillota
GCC
Gly
>WENV183745721
POVV01000454
302145
Bacillota
GAA
Phe
>WENV183745741
POVV01000503
280476
Bacillota
TTT
Lys
>WENV183745738
POVV01000503
179166
Bacillota
TCT
Arg
>WENV183745767
POVV01000702
296855
Bacillota
GGT
Thr
>WENV183745784
POVV01000751
296855
Bacillota
GGT
Thr
>WENV183745781
POVV01000751
332181
Bacillota
TGT
Thr
>WENV183745787
POVV01000779
283367
Bacillota
GCC
Gly
>WENV183745819
POVV01001050
176391
Bacillota
TGG
Pro
>WENV183745820
POVV01001050
482449
Bacillota
TCC
Gly
>WENV183745830
POVV01001103
221826
Bacillota
ACG
Arg
>WENV183745842
POVV01001284
179845
Bacillota
CGG
Pro
>WENV183745851
POVV01001355
283367
Bacillota
GCC
Gly
>WENV183745863
POVV01001463
283367
Bacillota
GCC
Gly
>WENV183745886
POVV01001565
399152
Bacillota
GCC
Gly
>WENV183745885
POVV01001565
283292
Bacillota
GAA
Phe
>WENV183745887
POVV01001565
400371
Bacillota
GCA
Cys
>WENV183745894
POVV01001664
73638
Bacillota
AAG
Leu
>WENV183745904
POVV01001708
296855
Bacillota
GGT
Thr
>WENV183745907
POVV01001708
176391
Bacillota
TGG
Pro
>WENV183745906
POVV01001708
482449
Bacillota
TCC
Gly
>WENV183745916
POVV01001868
178612
Bacillota
CCT
Arg
>WENV183745927
POVV01002050
399152
Bacillota
GCC
Gly
>WENV183745928
POVV01002050
281076
Bacillota
CCA
Trp
>WENV183745931
POVV01002068
283367
Bacillota
GCC
Gly
>WENV183745955
POVV01002411
432752
Bacillota
TTC
Glu
>WENV183745971
POVV01002776
399152
Bacillota
GCC
Gly
>WENV183745973
POVV01002787
283292
Bacillota
GAA
Phe
>WENV183745977
POVV01002899
73638
Bacillota
AAG
Leu
>WENV183745991
POVV01003096
399152
Bacillota
GCC
Gly
>WENV183745990
POVV01003096
283292
Bacillota
GAA
Phe
>WENV183746003
POVV01003378
296855
Bacillota
GGT
Thr
>WENV183746000
POVV01003378
289713
Bacillota
TGT
Thr
>WENV183746005
POVV01003551
73638
Bacillota
AAG
Leu
>WENV183746019
POVV01004083
176391
Bacillota
TGG
Pro
>WENV183746026
POVV01004207
333293
Bacillota
TTT
Lys
>WENV183746048
POVV01004959
295166
Bacillota
TGC
Ala
>WENV183746057
POVV01005682
407726
Bacillota
CTG
Gln
>WENV183746080
POVV01007349
432753
Bacillota
GTT
Asn
>WENV183746082
POVV01007349
282753
Bacillota
TAC
Val
>WENV183746081
POVV01007349
432752
Bacillota
TTC
Glu
>WENV183746083
POVV01007349
195149
Bacillota
GTC
Asp
>WENV183746089
POVV01007750
399153
Bacillota
TTC
Glu
>WENV183746091
POVV01007750
186123
Bacillota
GTC
Asp
>WENV183746103
POVV01007976
221826
Bacillota
ACG
Arg
>WENV183746105
POVV01007977
283367
Bacillota
GCC
Gly
>WENV183746122
POVV01009292
283367
Bacillota
GCC
Gly
>WENV183746128
POVV01009476
302145
Bacillota
GAA
Phe
>WENV183746124
POVV01009476
294020
Bacillota
TAC
Val
>WENV183746149
POVV01010350
333293
Bacillota
TTT
Lys
>WENV183746155
POVV01011538
176391
Bacillota
TGG
Pro
>WENV183746165
POVV01011846
332181
Bacillota
TGT
Thr
>WENV183746175
POVV01012035
333293
Bacillota
TTT
Lys
>WENV183746189
POVV01012709
221826
Bacillota
ACG
Arg
>WENV183746187
POVV01012709
294020
Bacillota
TAC
Val
>WENV183746193
POVV01013163
176391
Bacillota
TGG
Pro
>WENV183746202
POVV01013900
283367
Bacillota
GCC
Gly
>WENV183746207
POVV01014460
432752
Bacillota
TTC
Glu
>WENV183746206
POVV01014460
324137
Bacillota
>WENV183746229
POVV01016453
280486
Bacillota
TGC
Ala
>WENV183746239
POVV01017746
186123
Bacillota
GTC
Asp
>WENV183746240
POVV01017746
283292
Bacillota
GAA
Phe
>WENV183746254
POVV01019005
182340
Bacillota
ACG
Arg
>WENV183746253
POVV01019005
400371
Bacillota
GCA
Cys
>WENV183746260
POVV01020296
221826
Bacillota
ACG
Arg
>WENV183746258
POVV01020296
294020
Bacillota
TAC
Val
>WENV183746274
POVV01021735
295166
Bacillota
TGC
Ala
>WENV183746287
POVV01022391
175911
Bacillota
GTC
Asp
>WENV183746299
POVV01025344
211996
Bacillota
CAT
Met
>WENV183746302
POVV01025580
280486
Bacillota
TGC
Ala
>WENV183746305
POVV01025927
332181
Bacillota
TGT
Thr
>WENV183746304
POVV01025927
283292
Bacillota
GAA
Phe
>WENV183746328
POVV01029318
201856
Bacillota
GAT
Ile
>WENV183746349
POVV01031196
176391
Bacillota
TGG
Pro
>WENV183746350
POVV01031196
482449
Bacillota
TCC
Gly
>WENV183746353
POVV01031222
294020
Bacillota
TAC
Val
>WENV183746357
POVV01031397
399152
Bacillota
GCC
Gly
>WENV183746371
POVV01034025
283367
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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