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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080358
ABCO01000001
176863
Bacteroidota
CAT
Met
>WENV080363
ABCO01000001
177901
Bacteroidota
GTT
Asn
>WENV080368
ABCO01000002
281190
Bacteroidota
CAT
Met
>WENV080369
ABCO01000002
296664
Bacteroidota
GAA
Phe
>WENV080377
ABCO01000005
155786
Bacteroidota
TGG
Pro
>WENV080378
ABCO01000005
155786
Bacteroidota
TGG
Pro
>WENV080379
ABCO01000005
176707
Bacteroidota
TCT
Arg
>WENV080376
ABCO01000005
74253
Bacteroidota
GCT
Ser
>WENV080375
ABCO01000005
186597
Bacteroidota
GTG
His
>WENV080388
ABCO01000009
120026
Bacteroidota
GTA
Tyr
>WENV080386
ABCO01000009
399898
Bacteroidota
GGT
Thr
>WENV080392
ABCO01000013
56162
Bacteroidota
TGA
Ser
>WENV080393
ABCO01000017
402390
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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