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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162433
CEOM01029890
400818
Bacteroidota
TTC
Glu
>WENV170162502
CEOM01036385
400818
Bacteroidota
TTC
Glu
>WENV170162776
CEOM01063423
400818
Bacteroidota
TTC
Glu
>WENV170163090
CEOM01093608
400818
Bacteroidota
TTC
Glu
>WENV170163621
CEOM01156484
400818
Bacteroidota
TTC
Glu
>WENV170162589
CEOM01043664
156595
Bacteroidota
TGG
Pro
>WENV170163164
CEOM01102359
156595
Bacteroidota
TGG
Pro
>WENV170162105
CEOM01003317
198599
Bacteroidota
GTG
His
>WENV170163698
CEOM01165744
198599
Bacteroidota
GTG
His
>WENV170164467
CEOM01349456
198599
Bacteroidota
GTG
His
>WENV170163221
CEOM01109365
156605
Bacteroidota
GAC
Val
>WENV170163375
CEOM01125536
156605
Bacteroidota
GAC
Val
>WENV170164060
CEOM01197515
156605
Bacteroidota
GAC
Val
>WENV170164178
CEOM01204687
156605
Bacteroidota
GAC
Val
>WENV170162722
CEOM01057114
305664
Bacteroidota
CAT
Met
>WENV170163428
CEOM01131401
305664
Bacteroidota
CAT
Met
>WENV170162504
CEOM01036541
155808
Bacteroidota
TGG
Pro
>WENV170162510
CEOM01036748
155808
Bacteroidota
TGG
Pro
>WENV170162612
CEOM01046275
155808
Bacteroidota
TGG
Pro
>WENV170162891
CEOM01074038
155808
Bacteroidota
TGG
Pro
>WENV170164084
CEOM01200094
74253
Bacteroidota
GCT
Ser
>WENV170162167
CEOM01007748
21789
Bacteroidota
GGA
Ser
>WENV170162836
CEOM01068295
21789
Bacteroidota
GGA
Ser
>WENV170164025
CEOM01195729
21789
Bacteroidota
GGA
Ser
>WENV170162247
CEOM01013693
121312
Bacteroidota
TAG
Leu
>WENV170163194
CEOM01105535
298625
Bacteroidota
CAT
Met
>WENV170162600
CEOM01044907
156596
Bacteroidota
TAC
Val
>WENV170163575
CEOM01150083
156596
Bacteroidota
TAC
Val
>WENV170163584
CEOM01150918
156596
Bacteroidota
TAC
Val
>WENV170162115
CEOM01004495
299065
Bacteroidota
TTG
Gln
>WENV170162948
CEOM01079602
483389
Bacteroidota
GCA
Cys
>WENV170162453
CEOM01032096
193718
Bacteroidota
GTC
Asp
>WENV170162771
CEOM01063071
193718
Bacteroidota
GTC
Asp
>WENV170163347
CEOM01122504
193718
Bacteroidota
GTC
Asp
>WENV170162561
CEOM01040566
21872
Bacteroidota
GGA
Ser
>WENV170162351
CEOM01022684
181598
Bacteroidota
GTT
Asn
>WENV170162369
CEOM01024818
181598
Bacteroidota
GTT
Asn
>WENV170162445
CEOM01031181
181598
Bacteroidota
GTT
Asn
>WENV170162490
CEOM01035802
181598
Bacteroidota
GTT
Asn
>WENV170162872
CEOM01071311
181598
Bacteroidota
GTT
Asn
>WENV170163143
CEOM01099801
181598
Bacteroidota
GTT
Asn
>WENV170163556
CEOM01147748
181598
Bacteroidota
GTT
Asn
>WENV170164151
CEOM01203774
186849
Bacteroidota
TCT
Arg
>WENV170162838
CEOM01068583
182234
Bacteroidota
TGT
Thr
>WENV170162937
CEOM01078700
183480
Bacteroidota
TGC
Ala
>WENV170163212
CEOM01108158
296664
Bacteroidota
GAA
Phe
>WENV170164223
CEOM01206705
296664
Bacteroidota
GAA
Phe
>WENV170164258
CEOM01207478
296664
Bacteroidota
GAA
Phe
>WENV170164115
CEOM01201991
179598
Bacteroidota
CAT
Met
>WENV170162984
CEOM01083462
156340
Bacteroidota
GGG
Pro
>WENV170162303
CEOM01018641
56162
Bacteroidota
TGA
Ser
>WENV170162789
CEOM01064710
56162
Bacteroidota
TGA
Ser
>WENV170163139
CEOM01099513
56162
Bacteroidota
TGA
Ser
>WENV170163602
CEOM01153993
56162
Bacteroidota
TGA
Ser
>WENV170162712
CEOM01056148
299085
Bacteroidota
TTT
Lys
>WENV170162942
CEOM01078921
299085
Bacteroidota
TTT
Lys
>WENV170163687
CEOM01164710
299085
Bacteroidota
TTT
Lys
>WENV170163701
CEOM01166161
299085
Bacteroidota
TTT
Lys
>WENV170163802
CEOM01175665
299085
Bacteroidota
TTT
Lys
>WENV170162257
CEOM01014592
299085
Bacteroidota
TTT
Lys
>WENV170164454
CEOM01340895
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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