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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170220493
CEPZ01174779
193675
Bacteroidota
CAT
Met
>WENV170219088
CEPZ01039804
400818
Bacteroidota
TTC
Glu
>WENV170220830
CEPZ01201822
281538
Bacteroidota
GAA
Phe
>WENV170219342
CEPZ01057464
200370
Bacteroidota
CAT
Met
>WENV170218481
CEPZ01008967
155808
Bacteroidota
TGG
Pro
>WENV170219259
CEPZ01052785
155808
Bacteroidota
TGG
Pro
>WENV170220017
CEPZ01087735
74253
Bacteroidota
GCT
Ser
>WENV170219262
CEPZ01052785
100107
Bacteroidota
GTA
Tyr
>WENV170220124
CEPZ01088422
58240
Bacteroidota
TGA
Ser
>WENV170219549
CEPZ01070908
21789
Bacteroidota
GGA
Ser
>WENV170220037
CEPZ01088015
298625
Bacteroidota
CAT
Met
>WENV170218595
CEPZ01013735
284239
Bacteroidota
TTT
Lys
>WENV170219354
CEPZ01058052
299065
Bacteroidota
TTG
Gln
>WENV170220341
CEPZ01146798
117927
Bacteroidota
TAG
Leu
>WENV170220321
CEPZ01143015
179374
Bacteroidota
TGG
Pro
>WENV170219261
CEPZ01052785
182234
Bacteroidota
TGT
Thr
>WENV170219630
CEPZ01073527
179598
Bacteroidota
CAT
Met
>WENV170219087
CEPZ01039804
399343
Bacteroidota
TTC
Glu
>WENV170219347
CEPZ01057464
399343
Bacteroidota
TTC
Glu
>WENV170220314
CEPZ01141467
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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