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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170301858
CESH01076891
402532
Bacteroidota
GCC
Gly
>WENV170301392
CESH01031679
400818
Bacteroidota
TTC
Glu
>WENV170301397
CESH01032289
400818
Bacteroidota
TTC
Glu
>WENV170303217
CESH01276465
400818
Bacteroidota
TTC
Glu
>WENV170303444
CESH01292323
400818
Bacteroidota
TTC
Glu
>WENV170301859
CESH01076891
73133
Bacteroidota
TAA
Leu
>WENV170303425
CESH01291775
281538
Bacteroidota
GAA
Phe
>WENV170302017
CESH01093376
156605
Bacteroidota
GAC
Val
>WENV170302414
CESH01148099
156605
Bacteroidota
GAC
Val
>WENV170302823
CESH01209688
156605
Bacteroidota
GAC
Val
>WENV170303488
CESH01292927
156605
Bacteroidota
GAC
Val
>WENV170303462
CESH01292799
20278
Bacteroidota
GGA
Ser
>WENV170301894
CESH01081082
281190
Bacteroidota
CAT
Met
>WENV170301084
CESH01003403
320084
Bacteroidota
TTT
Lys
>WENV170301126
CESH01006055
320084
Bacteroidota
TTT
Lys
>WENV170301660
CESH01056393
320084
Bacteroidota
TTT
Lys
>WENV170301879
CESH01079278
320084
Bacteroidota
TTT
Lys
>WENV170302500
CESH01161250
320084
Bacteroidota
TTT
Lys
>WENV170303356
CESH01288055
320084
Bacteroidota
TTT
Lys
>WENV170302089
CESH01103307
155786
Bacteroidota
TGG
Pro
>WENV170301234
CESH01015274
320669
Bacteroidota
GAA
Phe
>WENV170301990
CESH01091326
320669
Bacteroidota
GAA
Phe
>WENV170302179
CESH01114655
320669
Bacteroidota
GAA
Phe
>WENV170302202
CESH01118017
320669
Bacteroidota
GAA
Phe
>WENV170302834
CESH01211417
320669
Bacteroidota
GAA
Phe
>WENV170303342
CESH01287047
320669
Bacteroidota
GAA
Phe
>WENV170302962
CESH01235962
402171
Bacteroidota
TTC
Glu
>WENV170301738
CESH01065558
155808
Bacteroidota
TGG
Pro
>WENV170303206
CESH01274473
155808
Bacteroidota
TGG
Pro
>WENV170303280
CESH01282234
155808
Bacteroidota
TGG
Pro
>WENV170302239
CESH01123737
176812
Bacteroidota
TCT
Arg
>WENV170302020
CESH01093845
291910
Bacteroidota
TTG
Gln
>WENV170301187
CESH01010733
197494
Bacteroidota
GTC
Asp
>WENV170301757
CESH01066788
197494
Bacteroidota
GTC
Asp
>WENV170301073
CESH01002216
100107
Bacteroidota
GTA
Tyr
>WENV170301123
CESH01005936
121312
Bacteroidota
TAG
Leu
>WENV170301871
CESH01078774
156596
Bacteroidota
TAC
Val
>WENV170301658
CESH01056331
299065
Bacteroidota
TTG
Gln
>WENV170301082
CESH01002945
483389
Bacteroidota
GCA
Cys
>WENV170301314
CESH01024417
483389
Bacteroidota
GCA
Cys
>WENV170303456
CESH01292667
483389
Bacteroidota
GCA
Cys
>WENV170301249
CESH01018074
193718
Bacteroidota
GTC
Asp
>WENV170303463
CESH01292799
193718
Bacteroidota
GTC
Asp
>WENV170303301
CESH01284021
21872
Bacteroidota
GGA
Ser
>WENV170301431
CESH01035407
286464
Bacteroidota
CAT
Met
>WENV170301101
CESH01004954
181598
Bacteroidota
GTT
Asn
>WENV170301340
CESH01026151
181598
Bacteroidota
GTT
Asn
>WENV170301432
CESH01035616
181598
Bacteroidota
GTT
Asn
>WENV170303062
CESH01252949
181598
Bacteroidota
GTT
Asn
>WENV170303432
CESH01292026
181598
Bacteroidota
GTT
Asn
>WENV170302103
CESH01104613
284409
Bacteroidota
CAT
Met
>WENV170302322
CESH01134716
284409
Bacteroidota
CAT
Met
>WENV170302677
CESH01187119
182234
Bacteroidota
TGT
Thr
>WENV170303864
CESH01508466
200485
Bacteroidota
CAT
Met
>WENV170301143
CESH01007022
183480
Bacteroidota
TGC
Ala
>WENV170302237
CESH01123575
183480
Bacteroidota
TGC
Ala
>WENV170302599
CESH01175354
183480
Bacteroidota
TGC
Ala
>WENV170302675
CESH01186891
296664
Bacteroidota
GAA
Phe
>WENV170303446
CESH01292485
179598
Bacteroidota
CAT
Met
>WENV170302211
CESH01118651
156340
Bacteroidota
GGG
Pro
>WENV170302700
CESH01191400
156340
Bacteroidota
GGG
Pro
>WENV170301536
CESH01044387
56162
Bacteroidota
TGA
Ser
>WENV170303103
CESH01259484
56162
Bacteroidota
TGA
Ser
>WENV170303406
CESH01291177
56162
Bacteroidota
TGA
Ser
>WENV170303387
CESH01290136
299085
Bacteroidota
TTT
Lys
>WENV170301163
CESH01008197
480568
Bacteroidota
GCA
Cys
>WENV170302909
CESH01223873
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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